Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G65.183 Capsicum annuum HOM05D006537 ORTHO05D008186 1.9e-123 446.0 254 100.0
PGSC0003DMG400027008 Solanum tuberosum HOM05D006537 ORTHO05D008186 5.8e-117 424.5 254 85.8
Solyc06g073410.3 Solanum lycopersicum HOM05D006537 ORTHO05D008186 7.6e-117 424.1 254 85.4
Sopen06g029790 Solanum pennellii HOM05D006537 ORTHO05D008186 7.6e-117 424.1 254 85.4
Peaxi162Scf00375g00618 Petunia axillaris HOM05D006537 ORTHO05D008186 7.4e-112 407.5 254 80.3
Nitab4.5_0004579g0020 Nicotiana tabacum HOM05D006537 ORTHO05D008186 2.6e-109 399.1 246 82.5
Dinv22722 Davidia involucrata HOM05D006537 ORTHO05D008186 3.1e-102 375.6 248 75.4
TWI63G0033 Tripterygium wilfordii HOM05D006537 ORTHO05D008186 8.5e-100 367.5 247 73.7
MD04G1039500 Malus domestica HOM05D006537 ORTHO05D008186 4.6e-98 361.7 249 70.7
Prupe.1G190300 Prunus persica HOM05D006537 ORTHO05D008186 1.4e-97 360.1 249 69.5
CSS0005792 Camellia sinensis var. sinensis HOM05D006537 ORTHO05D008186 1.8e-97 359.8 245 73.9
GSVIVG01010746001 Vitis vinifera HOM05D006537 ORTHO05D008186 1.8e-97 359.8 246 72.0
Atru.chr3.1537 Acer truncatum HOM05D006537 ORTHO05D008186 3.9e-97 358.6 252 69.4
Haze_01534 Corylus avellana HOM05D006537 ORTHO05D008186 6.7e-97 357.8 248 71.0
CiPaw.01G101300 Carya illinoinensis HOM05D006537 ORTHO05D008186 1.1e-96 357.1 248 71.0
MELO3C011641.2 Cucumis melo HOM05D006537 ORTHO05D008186 2.0e-96 356.3 248 70.2
ClCG08G004470 Citrullus lanatus HOM05D006537 ORTHO05D008186 3.3e-96 355.5 248 69.8
SGA_v2.0_scaffold74G24571 Striga asiatica HOM05D006537 ORTHO05D008186 5.7e-96 354.8 249 70.3
Gohir.A02G015200 Gossypium hirsutum HOM05D006537 ORTHO05D008186 7.4e-96 354.4 245 71.0
Lj3g0010197 Lotus japonicus HOM05D006537 ORTHO05D008186 9.7e-96 354.0 252 69.0
QL10p048350 Quercus lobata HOM05D006537 ORTHO05D008186 9.7e-96 354.0 248 68.5
Potri.007G127400 Populus trichocarpa HOM05D006537 ORTHO05D008186 1.3e-95 353.6 243 72.4
Duzib212G0958 Durio zibethinus HOM05D006537 ORTHO05D008186 2.8e-95 352.4 248 71.4
Gohir.D02G016700 Gossypium hirsutum HOM05D006537 ORTHO05D008186 2.8e-95 352.4 243 71.2
Actinidia35970 Actinidia chinensis HOM05D006537 ORTHO05D008186 4.8e-95 351.7 246 71.5
Thecc.04G185300 Theobroma cacao HOM05D006537 ORTHO05D008186 4.8e-95 351.7 248 71.0
AL4G26710 Arabidopsis lyrata HOM05D006537 ORTHO05D008186 6.3e-95 351.3 245 70.2
arahy.Tifrunner.gnm1.ann1.RQ8JR0 Arachis hypogaea HOM05D006537 ORTHO05D008186 6.3e-95 351.3 244 70.9
arahy.Tifrunner.gnm1.ann1.W0CVEC Arachis hypogaea HOM05D006537 ORTHO05D008186 6.3e-95 351.3 244 70.9
TAR633G2589 Trochodendron aralioides HOM05D006537 ORTHO05D008186 6.3e-95 351.3 245 72.2
AT2G31440 Arabidopsis thaliana HOM05D006537 ORTHO05D008186 8.2e-95 350.9 245 69.8
Cc00_g09850 Coffea canephora HOM05D006537 ORTHO05D008186 1.1e-94 350.5 249 70.7
A03p17600 Brassica napus HOM05D006537 ORTHO05D008186 1.4e-94 350.1 247 69.2
Gorai.005G020200 Gossypium raimondii HOM05D006537 ORTHO05D008186 1.4e-94 350.1 243 70.8
Ca_20779_v3 Cicer arietinum L. HOM05D006537 ORTHO05D008186 4.1e-94 348.6 248 68.5
BcaC01g05952 Brassica carinata HOM05D006537 ORTHO05D008186 5.3e-94 348.2 248 68.5
C03p20710 Brassica napus HOM05D006537 ORTHO05D008186 5.3e-94 348.2 248 68.5
BolC3t14452H Brassica oleracea HOM05D006537 ORTHO05D008186 5.3e-94 348.2 248 68.5
Ciclev10021930m.g Citrus clementina HOM05D006537 ORTHO05D008186 5.3e-94 348.2 239 71.1
CsaV3_6G003840 Cucumis sativus L. HOM05D006537 ORTHO05D008186 5.3e-94 348.2 244 70.1
Carub.0004s1277 Capsella rubella HOM05D006537 ORTHO05D008186 9.1e-94 347.4 245 69.0
BraA03t11027Z Brassica rapa HOM05D006537 ORTHO05D008186 1.2e-93 347.1 247 68.4
FvH4_4g11160 Fragaria vesca HOM05D006537 ORTHO05D008186 1.2e-93 347.1 245 70.2
Sp4g13920 Schrenkiella parvula HOM05D006537 ORTHO05D008186 1.2e-93 347.1 250 67.6
Aqoxy2G04100 Aquilegia oxysepala HOM05D006537 ORTHO05D008186 1.5e-93 346.7 248 67.7
Eucgr.A00074 Eucalyptus grandis HOM05D006537 ORTHO05D008186 1.5e-93 346.7 242 69.8
Migut.C00288 Erythranthe guttata HOM05D006537 ORTHO05D008186 2.6e-93 345.9 249 69.9
PSO732G0008 Papaver somniferum HOM05D006537 ORTHO05D008186 2.6e-93 345.9 245 69.8
CARHR125090 Cardamine hirsuta HOM05D006537 ORTHO05D008186 4.5e-93 345.1 248 69.0
PSO675G9308 Papaver somniferum HOM05D006537 ORTHO05D008186 4.5e-93 345.1 245 69.8
AUR62015408 Chenopodium quinoa HOM05D006537 ORTHO05D008186 5.9e-93 344.7 245 69.8
Medtr4g067050 Medicago truncatula HOM05D006537 ORTHO05D008186 5.9e-93 344.7 245 69.4
Eucgr.A00271 Eucalyptus grandis HOM05D006537 ORTHO05D008186 7.7e-93 344.4 242 69.4
Duzib268G1074 Durio zibethinus HOM05D006537 ORTHO05D008186 1.3e-92 343.6 248 69.4
Glyma.12G053200 Glycine max HOM05D006537 ORTHO05D008186 1.3e-92 343.6 245 68.2
Phvul.011G055200 Phaseolus vulgaris HOM05D006537 ORTHO05D008186 1.3e-92 343.6 248 68.5
Rhsim09G0028500 Rhododendron simsii HOM05D006537 ORTHO05D008186 1.3e-92 343.6 257 69.3
Oeu011639.1 Olea europaea HOM05D006537 ORTHO05D008186 1.7e-92 343.2 248 70.2
TPR.G34202 Trifolium pratense HOM05D006537 ORTHO05D008186 1.7e-92 343.2 245 68.6
Actinidia34608 Actinidia chinensis HOM05D006537 ORTHO05D008186 2.2e-92 342.8 246 69.9
RcHm_v2.0_Chr4g0407291 Rosa chinensis HOM05D006537 ORTHO05D008186 2.2e-92 342.8 245 73.9
Glyma.11G128700 Glycine max HOM05D006537 ORTHO05D008186 3.8e-92 342.0 245 69.4
Psat7g214000 Pisum sativum HOM05D006537 ORTHO05D008186 3.8e-92 342.0 245 68.6
Thhalv10017140m.g Eutrema salsugineum HOM05D006537 ORTHO05D008186 6.5e-92 341.3 245 69.8
VMungo1127G2200 Vigna mungo HOM05D006537 ORTHO05D008186 6.5e-92 341.3 248 68.5
THA.LOC104826193 Tarenaya hassleriana HOM05D006537 ORTHO05D008186 1.1e-91 340.5 245 73.1
Sed0000584 Sechium edule HOM05D006537 ORTHO05D008186 2.5e-91 339.3 252 68.3
BcaB01g04045 Brassica carinata HOM05D006537 ORTHO05D008186 5.5e-91 338.2 247 67.6
Aa31LG5G5440 Aethionema arabicum HOM05D006537 ORTHO05D008186 9.4e-91 337.4 245 69.4
CANSAT78G1337 Cannabis sativa HOM05D006537 ORTHO05D008186 2.7e-90 335.9 246 68.3
Lalb_Chr01g0003221 Lupinus albus HOM05D006537 ORTHO05D008186 2.3e-89 332.8 245 68.2
unitig_747.g21541 Utricularia gibba HOM05D006537 ORTHO05D008186 6.7e-89 331.3 239 68.6
Nitab4.5_0003132g0110 Nicotiana tabacum HOM05D006537 ORTHO05D008186 1.5e-88 330.1 207 81.6
Lsat_1_v5_gn_2_34721 Lactuca sativa HOM05D006537 ORTHO05D008186 4.4e-88 328.6 245 70.2
EL10Ac3g05587 Beta vulgaris HOM05D006537 ORTHO05D008186 2.2e-87 326.2 264 64.0
HanXRQChr14g0433111 Helianthus annuus HOM05D006537 ORTHO05D008186 2.2e-87 326.2 245 65.3
Sc25g0002980 Simmondsia chinensis HOM05D006537 ORTHO05D008186 2.4e-86 322.8 249 75.9
ECA238G3138 Erigeron canadensis HOM05D000961 ORTHO05D000001 6.5e-84 314.7 236 66.5
Nn1g09574 Nelumbo nucifera HOM05D006537 ORTHO05D008186 5.5e-83 311.6 246 63.4
CDE04G1858 Ceratophyllum demersum HOM05D006537 ORTHO05D008186 9.4e-83 310.8 246 61.8
ATR0686G132 Amborella trichopoda HOM05D006537 ORTHO05D008186 2.6e-80 302.8 245 66.9
AUR62002287 Chenopodium quinoa HOM05D006537 ORTHO05D008186 5.7e-80 301.6 188 75.5
Os02g0272600 Oryza sativa ssp. japonica HOM05D006537 ORTHO05D008186 4.8e-79 298.5 246 63.0
HPP92_005584 Vanilla planifolia HOM05D006537 ORTHO05D008186 4.8e-79 298.5 248 61.3
HPP92_005589 Vanilla planifolia HOM05D006537 ORTHO05D008186 6.3e-79 298.1 248 61.3
COL.COLO4_24411 Corchorus olitorius HOM05D006537 ORTHO05D008186 8.2e-79 297.7 208 71.6
Manes.04G042325 Manihot esculenta HOM05D006537 ORTHO05D008186 8.2e-79 297.7 203 72.4
Zm00001eb237480 Zea mays HOM05D006537 ORTHO05D008186 1.8e-78 296.6 250 58.4
vmacro22675 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 2.4e-78 296.2 208 70.2
A10p04320 Brassica napus HOM05D006537 ORTHO05D008186 2.7e-77 292.7 190 71.1
SEGI_14947 Sequoiadendron giganteum HOM05D006537 ORTHO05D008186 2.9e-76 289.3 242 59.9
Sabra07G0103400 Salix brachista HOM05D006537 ORTHO05D008186 1.5e-75 287.0 225 67.1
Lj6A56G22 Lonicera japonica HOM05D006537 ORTHO05D008186 9.4e-75 284.3 245 62.9
Dinv44198 Davidia involucrata HOM05D006537 ORTHO05D008186 8.0e-74 281.2 184 78.3
MSTRG.24999 Avicennia marina HOM05D006537 ORTHO05D008186 8.8e-73 277.7 249 60.2
Hund03149 Selenicereus undatus HOM05D006537 ORTHO05D008186 8.8e-73 277.7 265 58.5
Cpa.g.sc409.1 Carica papaya HOM05D006537 ORTHO05D008186 1.5e-72 276.9 202 72.8
PGR083G1737 Punica granatum HOM05D006537 ORTHO05D008186 1.7e-68 263.5 246 56.1
BraA10t42709Z Brassica rapa HOM05D006537 ORTHO05D008186 2.3e-60 236.5 158 70.9
Mapoly0042s0024 Marchantia polymorpha HOM05D006537 ORTHO05D008186 1.4e-57 227.3 242 48.3
AagrBONN_evm.TU.Sc2ySwM_344.2170 Anthoceros agrestis HOM05D006537 ORTHO05D008186 1.8e-57 226.9 242 46.7
SMO174G0097 Selaginella moellendorffii HOM05D006537 ORTHO05D008186 1.7e-52 210.3 238 46.6
Pp3c14_4280 Physcomitrium patens HOM05D006537 ORTHO05D008186 1.5e-51 207.2 240 43.3
PSO675G6606 Papaver somniferum HOM05D006537 ORTHO05D008186 3.3e-51 206.1 153 65.4
PSO675G1145 Papaver somniferum HOM05D006537 ORTHO05D008186 2.1e-50 203.4 158 63.3
PSO229G0026 Papaver somniferum HOM05D006537 ORTHO05D008186 2.8e-50 203.0 153 64.7
Pp3c10_5780 Physcomitrium patens HOM05D006537 ORTHO05D008186 2.8e-50 203.0 251 41.0
SalBow7G4202 Salvia bowleyana HOM05D006537 ORTHO05D008186 4.4e-48 195.7 116 79.3
SHI21233 Sapria himalayana HOM05D006537 ORTHO05D008186 1.7e-47 193.7 157 60.5
PSO832G3398 Papaver somniferum HOM05D006537 ORTHO05D008186 2.9e-47 193.0 119 79.8
FAN07G2858 Fragaria x ananassa HOM05D006537 ORTHO05D008186 1.4e-46 190.7 202 54.5
PSO017G0422 Papaver somniferum HOM05D006537 ORTHO05D008186 4.1e-46 189.1 113 81.4
BraA10t42699Z Brassica rapa HOM05D006537 ORTHO05D008186 3.1e-33 146.4 95 73.7
Lj6P622T45 Lonicera japonica HOM05D006537 ORTHO05D008186 5.8e-32 142.1 91 73.6
A10p04420 Brassica napus HOM05D006537 ORTHO05D008186 8.4e-31 138.3 95 69.5
Cre13.g576300 Chlamydomonas reinhardtii HOM05D006537 ORTHO05D008186 1.9e-27 127.1 231 34.2
DCAR_022903 Daucus carota HOM05D006537 ORTHO05D008186 4.7e-26 122.5 119 57.1
CBR_g29804 Chara braunii HOM05D006537 ORTHO05D008186 1.3e-18 97.8 71 67.6
PRCOL_00006256 Prasinoderma coloniale HOM05D006537 ORTHO05D008186 1.1e-17 94.7 238 38.2
vmacro00700 Vaccinium macrocarpon HOM05D006537 ORTHO05D008186 6.9e-17 92.0 166 39.2
Sopen06g005930 Solanum pennellii HOM05D006537 ORTHO05D008186 4.9e-07 59.3 34 91.2
Cpa.g.c46401 Carica papaya HOM05D006537 ORTHO05D008186 7.1e-06 55.5 39 61.5


User provided reference genes

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