Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G65.131 Capsicum annuum HOM05D003663 ORTHO05D005327 9.1e-131 470.3 248 100.0
PGSC0003DMG400027034 Solanum tuberosum HOM05D003663 ORTHO05D005327 2.5e-96 355.9 249 80.3
Sopen06g029160 Solanum pennellii HOM05D003663 ORTHO05D005327 1.6e-79 300.1 249 71.1
Peaxi162Scf00815g00311 Petunia axillaris HOM05D003663 ORTHO05D005327 6.2e-79 298.1 193 82.9
Nitab4.5_0001762g0070 Nicotiana tabacum HOM05D003663 ORTHO05D005327 7.8e-66 254.6 248 63.3
Nitab4.5_0000021g0580 Nicotiana tabacum HOM05D003663 ORTHO05D005327 3.3e-64 249.2 230 62.2
Oeu027885.1 Olea europaea HOM05D003663 ORTHO05D005327 4.6e-50 202.2 207 53.1
Oeu060390.1 Olea europaea HOM05D002083 ORTHO05D000332 2.8e-47 193.0 209 51.2
Rhsim09G0213000 Rhododendron simsii HOM05D003663 ORTHO05D005327 1.8e-46 190.3 260 45.8
Lalb_Chr05g0220821 Lupinus albus HOM05D003663 ORTHO05D005327 3.1e-46 189.5 249 44.6
CSS0037566 Camellia sinensis var. sinensis HOM05D003663 ORTHO05D005327 3.4e-45 186.0 183 55.7
Glyma.17G149700 Glycine max HOM05D003663 ORTHO05D005327 1.7e-44 183.7 214 46.7
Hma1.2p1_1680F.1_g297170 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 2.9e-44 183.0 217 48.8
Lsat_1_v5_gn_2_136720 Lactuca sativa HOM05D003663 ORTHO05D005327 6.4e-44 181.8 197 52.8
Lj4g0026545 Lotus japonicus HOM05D003663 ORTHO05D005327 6.4e-44 181.8 236 47.0
vmacro22176 Vaccinium macrocarpon HOM05D003663 ORTHO05D005327 8.4e-44 181.4 227 48.0
TAR374G1477 Trochodendron aralioides HOM05D003663 ORTHO05D005327 1.4e-43 180.6 252 45.6
Lj3P887T57 Lonicera japonica HOM05D003663 ORTHO05D005327 4.2e-43 179.1 205 48.8
Duzib177G0557 Durio zibethinus HOM05D003663 ORTHO05D005327 5.4e-43 178.7 245 44.9
Rhsim03G0221600 Rhododendron simsii HOM05D003663 ORTHO05D005327 5.4e-43 178.7 198 49.5
HanXRQChr14g0462981 Helianthus annuus HOM05D003663 ORTHO05D005327 7.1e-43 178.3 147 61.2
TWI34G0428 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 9.3e-43 177.9 186 52.2
Nn3g19378 Nelumbo nucifera HOM05D003663 ORTHO05D005327 1.6e-42 177.2 166 59.0
ECA233G1163 Erigeron canadensis HOM05D003663 ORTHO05D005327 4.6e-42 175.6 223 47.5
SGA_v2.0_scaffold50G18444 Striga asiatica HOM05D003663 ORTHO05D005327 1.8e-41 173.7 226 48.2
Aqoxy3G02161 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 3.0e-41 172.9 187 50.8
Phvul.003G226500 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 3.9e-41 172.6 230 46.1
TPR.G17125 Trifolium pratense HOM05D003663 ORTHO05D005327 1.5e-40 170.6 207 45.9
Sabra19G0059300 Salix brachista HOM05D003663 ORTHO05D005327 1.9e-40 170.2 241 44.8
CANSAT21G0248 Cannabis sativa HOM05D003663 ORTHO05D005327 3.3e-40 169.5 249 43.0
Haze_00422 Corylus avellana HOM05D003663 ORTHO05D005327 3.3e-40 169.5 223 46.6
PSO063G6858 Papaver somniferum HOM05D003663 ORTHO05D005327 3.3e-40 169.5 243 44.0
Psat4g076520 Pisum sativum HOM05D003663 ORTHO05D005327 4.3e-40 169.1 228 42.1
Migut.F00942 Erythranthe guttata HOM05D003663 ORTHO05D005327 5.6e-40 168.7 244 44.7
Potri.019G049600 Populus trichocarpa HOM05D003663 ORTHO05D005327 5.6e-40 168.7 242 45.0
Cpa.g.sc504.5 Carica papaya HOM05D003663 ORTHO05D005327 7.4e-40 168.3 230 45.7
PSO782G5365 Papaver somniferum HOM05D003663 ORTHO05D005327 2.1e-39 166.8 229 45.0
EL10Ac3g05074 Beta vulgaris HOM05D003663 ORTHO05D005327 6.2e-39 165.2 177 49.2
AUR62002065 Chenopodium quinoa HOM05D003663 ORTHO05D005327 6.2e-39 165.2 231 42.4
SalBow2G0094 Salvia bowleyana HOM05D003663 ORTHO05D005327 1.1e-38 164.5 188 48.9
VMungo0251G1526 Vigna mungo HOM05D003663 ORTHO05D005327 1.8e-38 163.7 209 46.9
Manes.09G126900 Manihot esculenta HOM05D003663 ORTHO05D005327 2.4e-38 163.3 248 42.3
Cc00_g28240 Coffea canephora HOM05D003663 ORTHO05D005327 3.1e-38 162.9 164 52.4
MBI04_g20973_MAGBIO Magnolia biondii HOM05D003663 ORTHO05D005327 3.1e-38 162.9 227 44.1
PGR142G2930 Punica granatum HOM05D003663 ORTHO05D005327 4.0e-38 162.5 151 52.3
Duzib106G1874 Durio zibethinus HOM05D003663 ORTHO05D005327 6.9e-38 161.8 252 43.7
Ah.13g072750 Amaranthus hybridus HOM05D003663 ORTHO05D005327 2.0e-37 160.2 240 44.2
DCAR_010543 Daucus carota HOM05D003663 ORTHO05D005327 2.6e-37 159.8 211 46.9
Cfa016035 Carpinus fangiana HOM05D003663 ORTHO05D005327 4.5e-37 159.1 200 46.0
Ciclev10021912m.g Citrus clementina HOM05D003663 ORTHO05D005327 7.6e-37 158.3 243 40.7
Medtr4g099150 Medicago truncatula HOM05D003663 ORTHO05D005327 1.3e-36 157.5 223 41.3
QL09p023778 Quercus lobata HOM05D003663 ORTHO05D005327 2.9e-36 156.4 232 43.1
Sc13g0010870 Simmondsia chinensis HOM05D003663 ORTHO05D005327 6.4e-36 155.2 251 39.0
Duzib128G0448 Durio zibethinus HOM05D003663 ORTHO05D005327 1.1e-35 154.5 196 46.4
CiPaw.06G032900 Carya illinoinensis HOM05D003663 ORTHO05D005327 2.5e-35 153.3 193 47.2
Eucgr.K00086 Eucalyptus grandis HOM05D003663 ORTHO05D005327 2.5e-35 153.3 236 42.4
THA.LOC104827213 Tarenaya hassleriana HOM05D003663 ORTHO05D005327 2.5e-35 153.3 216 44.0
COL.COLO4_06064 Corchorus olitorius HOM05D003663 ORTHO05D005327 5.5e-35 152.1 225 42.7
Gorai.007G348900 Gossypium raimondii HOM05D003663 ORTHO05D005327 7.1e-35 151.8 146 53.4
Gohir.A11G303600 Gossypium hirsutum HOM05D003663 ORTHO05D005327 9.3e-35 151.4 175 49.1
BolC2t06783H Brassica oleracea HOM05D003663 ORTHO05D005327 7.9e-34 148.3 183 45.4
BcaNung00434 Brassica carinata HOM05D003663 ORTHO05D005327 1.5e-32 144.1 156 48.1
A02p03870 Brassica napus HOM05D003663 ORTHO05D005327 1.9e-32 143.7 187 43.3
BcaC03g18525 Brassica carinata HOM05D003663 ORTHO05D005327 5.6e-32 142.1 187 43.3
C02p08670 Brassica napus HOM05D003663 ORTHO05D005327 5.6e-32 142.1 187 43.3
BraA02t05351Z Brassica rapa HOM05D003663 ORTHO05D005327 7.4e-32 141.7 171 44.4
Gohir.D11G318900 Gossypium hirsutum HOM05D003663 ORTHO05D005327 9.6e-32 141.4 251 40.2
CARHR196240 Cardamine hirsuta HOM05D003663 ORTHO05D005327 1.3e-31 141.0 220 43.2
LjContig00081g0009748 Lotus japonicus HOM05D003663 ORTHO05D005327 1.3e-31 141.0 182 42.9
AL6G27920 Arabidopsis lyrata HOM05D003663 ORTHO05D005327 1.1e-30 137.9 233 39.1
AT5G16920 Arabidopsis thaliana HOM05D003663 ORTHO05D005327 1.4e-30 137.5 240 38.8
Carub.0006s1513 Capsella rubella HOM05D003663 ORTHO05D005327 2.4e-30 136.7 185 42.2
Prupe.2G326500 Prunus persica HOM05D003663 ORTHO05D005327 1.5e-29 134.0 181 46.4
Glyma.14G007200 Glycine max HOM05D003663 ORTHO05D005327 4.5e-29 132.5 182 39.6
Psat2g004440 Pisum sativum HOM05D003663 ORTHO05D005327 4.5e-29 132.5 194 38.7
Sp6g27190 Schrenkiella parvula HOM05D003663 ORTHO05D005327 4.5e-29 132.5 219 39.3
Thhalv10014405m.g Eutrema salsugineum HOM05D003663 ORTHO05D005327 1.3e-28 131.0 263 35.7
Actinidia33794 Actinidia chinensis HOM05D003663 ORTHO05D005327 1.7e-28 130.6 221 38.9
ATR0829G139 Amborella trichopoda HOM05D003663 ORTHO05D005327 2.2e-28 130.2 186 39.2
VMungo0540G0424 Vigna mungo HOM05D003663 ORTHO05D005327 1.1e-27 127.9 152 43.4
Ca_06459_v3 Cicer arietinum L. HOM05D003663 ORTHO05D005327 2.5e-27 126.7 184 38.6
Phvul.008G285700 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 3.2e-27 126.3 159 44.0
Nn1g03229 Nelumbo nucifera HOM05D003663 ORTHO05D005327 4.2e-27 125.9 152 42.1
VMungo0647G1338 Vigna mungo HOM05D003663 ORTHO05D005327 5.5e-27 125.6 176 42.0
ATR0624G116 Amborella trichopoda HOM05D003663 ORTHO05D005327 1.2e-26 124.4 178 37.6
Hma1.2p1_2614F.1_g325410 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 1.6e-26 124.0 151 43.0
TPR.G1287 Trifolium pratense HOM05D003663 ORTHO05D005327 2.1e-26 123.6 156 42.9
Hma1.2p1_1267F.1_g271530 Hydrangea macrophylla HOM05D003663 ORTHO05D005327 3.5e-26 122.9 176 41.5
Lalb_Chr17g0349111 Lupinus albus HOM05D003663 ORTHO05D005327 6.1e-26 122.1 147 43.5
Aqoxy3G02718 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 1.8e-25 120.6 192 38.0
arahy.Tifrunner.gnm1.ann1.5NF29Y Arachis hypogaea HOM05D003663 ORTHO05D005327 2.3e-25 120.2 130 44.6
arahy.Tifrunner.gnm1.ann1.CR9YGF Arachis hypogaea HOM05D003663 ORTHO05D005327 2.3e-25 120.2 130 44.6
Glyma.09G012100 Glycine max HOM05D003663 ORTHO05D005327 2.3e-25 120.2 156 41.7
arahy.Tifrunner.gnm1.ann1.8QBK2E Arachis hypogaea HOM05D003663 ORTHO05D005327 3.0e-25 119.8 191 37.2
arahy.Tifrunner.gnm1.ann1.P7DY53 Arachis hypogaea HOM05D003663 ORTHO05D005327 3.0e-25 119.8 191 37.2
MELO3C024107.2 Cucumis melo HOM05D003663 ORTHO05D005327 3.0e-25 119.8 160 41.9
TPR.G10569 Trifolium pratense HOM05D003663 ORTHO05D005327 3.0e-25 119.8 159 40.9
Lalb_Chr20g0119391 Lupinus albus HOM05D003663 ORTHO05D005327 5.1e-25 119.0 160 38.8
Phvul.006G141400 Phaseolus vulgaris HOM05D003663 ORTHO05D005327 6.7e-25 118.6 152 40.8
ClCG02G002710 Citrullus lanatus HOM05D003663 ORTHO05D005327 1.1e-24 117.9 143 43.4
Medtr5g097370 Medicago truncatula HOM05D003663 ORTHO05D005327 1.1e-24 117.9 185 36.8
Prupe.4G006800 Prunus persica HOM05D003663 ORTHO05D005327 1.5e-24 117.5 130 42.3
Lj6g0026147 Lotus japonicus HOM05D003663 ORTHO05D005327 4.3e-24 115.9 154 41.6
Ca_00744_v3 Cicer arietinum L. HOM05D003663 ORTHO05D005327 5.7e-24 115.5 151 41.7
TAR627G0054 Trochodendron aralioides HOM05D003663 ORTHO05D005327 5.7e-24 115.5 199 40.2
CsaV3_7G023690 Cucumis sativus L. HOM05D003663 ORTHO05D005327 7.4e-24 115.2 137 43.1
Sed0003500 Sechium edule HOM05D003663 ORTHO05D005327 7.4e-24 115.2 154 41.6
BcaB04g19727 Brassica carinata HOM05D003663 ORTHO05D005327 1.6e-23 114.0 162 38.3
TWI36G0551 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 2.2e-23 113.6 237 33.8
Thecc.05G213800 Theobroma cacao HOM05D003663 ORTHO05D005327 2.8e-23 113.2 246 38.6
A09p05770 Brassica napus HOM05D003663 ORTHO05D005327 6.3e-23 112.1 154 39.6
BraA09t36218Z Brassica rapa HOM05D003663 ORTHO05D005327 6.3e-23 112.1 154 39.6
MELO3C028604.2 Cucumis melo HOM05D003663 ORTHO05D005327 6.3e-23 112.1 177 38.4
C09p06370 Brassica napus HOM05D003663 ORTHO05D005327 8.2e-23 111.7 159 38.4
Eucgr.L03441 Eucalyptus grandis HOM05D003663 ORTHO05D005327 8.2e-23 111.7 117 46.2
BcaC04g23626 Brassica carinata HOM05D003663 ORTHO05D005327 1.4e-22 110.9 159 38.4
BolC9t53556H Brassica oleracea HOM05D003663 ORTHO05D005327 1.8e-22 110.5 158 38.6
FAN25G1738 Fragaria x ananassa HOM05D003663 ORTHO05D005327 1.8e-22 110.5 133 39.8
CARHR186960 Cardamine hirsuta HOM05D003663 ORTHO05D005327 4.1e-22 109.4 134 41.0
Psat1g178200 Pisum sativum HOM05D003663 ORTHO05D005327 4.1e-22 109.4 151 37.7
Aqoxy1G04227 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 6.9e-22 108.6 175 37.1
FvH4_3g00560 Fragaria vesca HOM05D003663 ORTHO05D005327 6.9e-22 108.6 133 38.3
Actinidia34308 Actinidia chinensis HOM05D003663 ORTHO05D005327 9.0e-22 108.2 77 68.8
Thhalv10005288m.g Eutrema salsugineum HOM05D003663 ORTHO05D005327 1.2e-21 107.8 134 40.3
Sed0016160 Sechium edule HOM05D003663 ORTHO05D005327 1.2e-21 107.8 139 43.9
Lalb_Chr16g0386341 Lupinus albus HOM05D003663 ORTHO05D005327 4.5e-21 105.9 94 53.2
AT5G26730 Arabidopsis thaliana HOM05D003663 ORTHO05D005327 7.7e-21 105.1 159 36.5
Carub.0006s2423 Capsella rubella HOM05D003663 ORTHO05D005327 2.2e-20 103.6 135 38.5
Aqoxy1G04229 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 2.9e-20 103.2 161 36.0
AL6G38450 Arabidopsis lyrata HOM05D003663 ORTHO05D005327 6.5e-20 102.1 159 35.8
Os12g0233900 Oryza sativa ssp. japonica HOM05D003663 ORTHO05D005327 6.5e-20 102.1 247 30.8
Aqoxy1G04228 Aquilegia oxysepala HOM05D003663 ORTHO05D005327 1.9e-19 100.5 129 38.8
PGR142G2458 Punica granatum HOM05D003663 ORTHO05D005327 2.5e-19 100.1 166 36.1
Nn1g01862 Nelumbo nucifera HOM05D003663 ORTHO05D005327 3.2e-19 99.8 133 42.1
THA.LOC104826655 Tarenaya hassleriana HOM05D003663 ORTHO05D005327 3.2e-19 99.8 154 36.4
PSO210G1796 Papaver somniferum HOM05D003663 ORTHO05D005327 4.2e-19 99.4 192 33.3
TWI38G0283 Tripterygium wilfordii HOM05D003663 ORTHO05D005327 4.2e-19 99.4 157 33.1
PSO302G0013 Papaver somniferum HOM05D003663 ORTHO05D005327 9.4e-19 98.2 192 32.8
MD09G1122000 Malus domestica HOM05D003663 ORTHO05D005327 1.6e-18 97.4 153 38.6
Potri.006G016700 Populus trichocarpa HOM05D003663 ORTHO05D005327 7.9e-18 95.1 105 41.9
BcaNung03959 Brassica carinata HOM05D003663 ORTHO05D005327 1.0e-17 94.7 159 35.8
C07p41660 Brassica napus HOM05D003663 ORTHO05D005327 1.0e-17 94.7 166 35.5
BolC7t44701H Brassica oleracea HOM05D003663 ORTHO05D005327 1.0e-17 94.7 166 35.5
BcaNung02825 Brassica carinata HOM05D003663 ORTHO05D005327 1.4e-17 94.4 166 35.5
A06p36830 Brassica napus HOM05D003663 ORTHO05D005327 1.4e-17 94.4 166 35.5
BraA06t26609Z Brassica rapa HOM05D003663 ORTHO05D005327 1.4e-17 94.4 166 35.5
Sed0002316 Sechium edule HOM05D003663 ORTHO05D005327 1.8e-17 94.0 121 38.0
Sed0020467 Sechium edule HOM05D003663 ORTHO05D005327 2.3e-17 93.6 132 38.6
Ciclev10017620m.g Citrus clementina HOM05D003663 ORTHO05D005327 6.7e-17 92.0 168 33.9
Sp2g21370 Schrenkiella parvula HOM05D003663 ORTHO05D005327 6.7e-17 92.0 118 39.0
ClCG01G010650 Citrullus lanatus HOM05D003663 ORTHO05D005327 2.5e-16 90.1 122 36.9
CsaV3_7G002660 Cucumis sativus L. HOM05D003663 ORTHO05D005327 7.4e-16 88.6 120 40.8
Prupe.3G201600 Prunus persica HOM05D003663 ORTHO05D005327 2.2e-15 87.0 150 37.3
RcHm_v2.0_Chr2g0156681 Rosa chinensis HOM05D003663 ORTHO05D005327 8.2e-15 85.1 115 34.8
BcaB07g29963 Brassica carinata HOM05D003663 ORTHO05D005327 1.4e-14 84.3 90 43.3
Actinidia08745 Actinidia chinensis HOM05D000074 ORTHO05D006801 1.5e-13 80.9 85 55.3
BcaB04g19726 Brassica carinata HOM05D003663 ORTHO05D005327 2.0e-13 80.5 154 32.5
A02p39370 Brassica napus HOM05D003663 ORTHO05D010021 7.7e-13 78.6 132 34.1
Glyma.02G305800 Glycine max HOM05D003663 ORTHO05D005327 2.9e-12 76.6 109 40.4
Medtr2g026520 Medicago truncatula HOM05D003663 ORTHO05D005327 6.5e-12 75.5 122 35.2
SMO290G0002 Selaginella moellendorffii HOM05D005423 ORTHO05D006223 3.3e-08 63.2 203 26.6
Potri.016G009000 Populus trichocarpa HOM05D003663 ORTHO05D005327 5.7e-08 62.4 60 45.0
Oeu063151.1 Olea europaea HOM05D005423 ORTHO05D006223 4.8e-07 59.3 117 29.9
SMO220G0003 Selaginella moellendorffii HOM05D002232 ORTHO05D002323 3.1e-06 56.6 251 24.7


User provided reference genes

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