Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G65.102 Capsicum annuum HOM05D007303 ORTHO05D009231 1.2e-32 142.5 69 100.0
Sopen10g027350 Solanum pennellii HOM05D007303 ORTHO05D009231 1.3e-31 139.0 69 94.2
PGSC0003DMG400027701 Solanum tuberosum HOM05D007303 ORTHO05D009231 1.3e-31 139.0 69 94.2
Nitab4.5_0001215g0100 Nicotiana tabacum HOM05D007303 ORTHO05D009231 3.6e-29 131.0 69 87.0
Migut.L02050 Erythranthe guttata HOM05D007303 ORTHO05D009231 1.7e-26 122.1 67 80.6
Oeu026929.1 Olea europaea HOM05D007303 ORTHO05D009231 4.9e-26 120.6 67 77.6
Prupe.6G297800 Prunus persica HOM05D007303 ORTHO05D009231 4.9e-26 120.6 66 78.8
RcHm_v2.0_Chr3g0459881 Rosa chinensis HOM05D007303 ORTHO05D009231 8.4e-26 119.8 67 77.6
FAN05G5278 Fragaria x ananassa HOM05D007303 ORTHO05D009231 1.9e-25 118.6 67 77.6
FAN09G2915 Fragaria x ananassa HOM05D007303 ORTHO05D009231 1.9e-25 118.6 67 77.6
Glyma.09G271600 Glycine max HOM05D007303 ORTHO05D009231 1.9e-25 118.6 65 81.5
Glyma.18G217700 Glycine max HOM05D007303 ORTHO05D009231 1.9e-25 118.6 65 81.5
PGR031G1377 Punica granatum HOM05D007303 ORTHO05D009231 3.2e-25 117.9 69 76.8
FvH4_6g09420 Fragaria vesca HOM05D007303 ORTHO05D009231 4.1e-25 117.5 67 76.1
CANSAT83G0001 Cannabis sativa HOM05D007303 ORTHO05D009231 5.4e-25 117.1 60 86.7
Manes.09G121600 Manihot esculenta HOM05D007303 ORTHO05D009231 5.4e-25 117.1 64 79.7
Hma1.2p1_0174F.1_g076630 Hydrangea macrophylla HOM05D007303 ORTHO05D009231 7.1e-25 116.7 62 85.5
COL.COLO4_05680 Corchorus olitorius HOM05D007303 ORTHO05D009231 9.2e-25 116.3 66 77.3
MELO3C025258.2 Cucumis melo HOM05D007303 ORTHO05D009231 9.2e-25 116.3 63 81.0
CsaV3_4G027390 Cucumis sativus L. HOM05D007303 ORTHO05D009231 9.2e-25 116.3 63 81.0
FAN14G3833 Fragaria x ananassa HOM05D007303 ORTHO05D009231 9.2e-25 116.3 65 76.9
Cpa.g.sc0.70 Carica papaya HOM05D007303 ORTHO05D009231 1.6e-24 115.5 65 76.9
Ca_23107_v3 Cicer arietinum L. HOM05D007303 ORTHO05D009231 1.6e-24 115.5 65 75.4
ClCG04G006170 Citrullus lanatus HOM05D007303 ORTHO05D009231 1.6e-24 115.5 66 78.8
BcaC09g47979 Brassica carinata HOM05D007303 ORTHO05D009231 2.1e-24 115.2 65 81.5
BolC1t05499H Brassica oleracea HOM05D007303 ORTHO05D009231 2.1e-24 115.2 65 81.5
Cc06_g00200 Coffea canephora HOM05D007303 ORTHO05D009231 2.1e-24 115.2 62 82.3
Oeu007820.2 Olea europaea HOM05D007303 ORTHO05D009231 2.1e-24 115.2 64 78.1
SalBow4G1964 Salvia bowleyana HOM05D007303 ORTHO05D009231 2.1e-24 115.2 70 75.7
SalBow4G2888 Salvia bowleyana HOM05D007303 ORTHO05D009231 2.1e-24 115.2 70 75.7
TAR633G2342 Trochodendron aralioides HOM05D007303 ORTHO05D009231 2.7e-24 114.8 61 80.3
AT3G08610 Arabidopsis thaliana HOM05D007303 ORTHO05D009231 3.5e-24 114.4 65 80.0
Sed0004919 Sechium edule HOM05D007303 ORTHO05D009231 3.5e-24 114.4 66 75.8
BcaB04g18583 Brassica carinata HOM05D007303 ORTHO05D009231 4.6e-24 114.0 65 80.0
BcaC05g29598 Brassica carinata HOM05D007303 ORTHO05D009231 4.6e-24 114.0 65 80.0
A05p40170 Brassica napus HOM05D007303 ORTHO05D009231 4.6e-24 114.0 65 80.0
MD04G1177900 Malus domestica HOM05D007303 ORTHO05D009231 4.6e-24 114.0 58 84.5
MD12G1193500 Malus domestica HOM05D007303 ORTHO05D009231 4.6e-24 114.0 58 84.5
BraA01t04340Z Brassica rapa HOM05D007303 ORTHO05D009231 6.0e-24 113.6 65 80.0
Phvul.008G079100 Phaseolus vulgaris HOM05D007303 ORTHO05D009231 7.8e-24 113.2 62 77.4
Hund19736 Selenicereus undatus HOM05D007303 ORTHO05D009231 7.8e-24 113.2 62 80.6
AL3G19590 Arabidopsis lyrata HOM05D007303 ORTHO05D009231 1.0e-23 112.8 65 78.5
C05p59250 Brassica napus HOM05D007303 ORTHO05D009231 1.0e-23 112.8 65 78.5
BolC5t34572H Brassica oleracea HOM05D007303 ORTHO05D009231 1.0e-23 112.8 65 78.5
Medtr8g005360 Medicago truncatula HOM05D007303 ORTHO05D009231 1.0e-23 112.8 62 75.8
BraA03t12812Z Brassica rapa HOM05D007303 ORTHO05D009231 1.3e-23 112.5 65 78.5
Cfa017000 Carpinus fangiana HOM05D007303 ORTHO05D009231 1.3e-23 112.5 62 79.0
Duzib151G0876 Durio zibethinus HOM05D007303 ORTHO05D009231 1.3e-23 112.5 66 74.2
Thhalv10021979m.g Eutrema salsugineum HOM05D007303 ORTHO05D009231 1.3e-23 112.5 65 78.5
TWI74G1491 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 1.3e-23 112.5 65 75.4
BcaC01g04187 Brassica carinata HOM05D007303 ORTHO05D009231 1.7e-23 112.1 65 78.5
BolC3t16676H Brassica oleracea HOM05D007303 ORTHO05D009231 1.7e-23 112.1 65 78.5
CARHR082910 Cardamine hirsuta HOM05D007303 ORTHO05D009231 2.3e-23 111.7 65 78.5
Sc20g0007240 Simmondsia chinensis HOM05D007303 ORTHO05D009231 2.3e-23 111.7 62 79.0
Haze_21228 Corylus avellana HOM05D007303 ORTHO05D009231 3.0e-23 111.3 62 79.0
TWI53G0471 Tripterygium wilfordii HOM05D007303 ORTHO05D009231 3.0e-23 111.3 64 76.6
arahy.Tifrunner.gnm1.ann1.RL3GXR Arachis hypogaea HOM05D007303 ORTHO05D009231 3.9e-23 110.9 65 75.4
arahy.Tifrunner.gnm1.ann1.ZQ7RI8 Arachis hypogaea HOM05D007303 ORTHO05D009231 3.9e-23 110.9 65 75.4
PSO384G4262 Papaver somniferum HOM05D007303 ORTHO05D009231 5.1e-23 110.5 56 85.7
Psat6g005160 Pisum sativum HOM05D007303 ORTHO05D009231 5.1e-23 110.5 62 74.2
Thecc.04G147800 Theobroma cacao HOM05D007303 ORTHO05D009231 5.1e-23 110.5 66 75.8
Oeu035181.1 Olea europaea HOM05D007303 ORTHO05D009231 6.6e-23 110.2 62 77.4
Carub.0003s0774 Capsella rubella HOM05D007303 ORTHO05D009231 8.6e-23 109.8 65 75.4
AUR62006451 Chenopodium quinoa HOM05D007303 ORTHO05D009231 8.6e-23 109.8 59 81.4
Gohir.A10G152200 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.1e-22 109.4 62 77.4
Gohir.A10G152700 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.1e-22 109.4 62 77.4
Gohir.D10G113500 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.1e-22 109.4 62 77.4
Gohir.D10G114000 Gossypium hirsutum HOM05D007303 ORTHO05D009231 1.1e-22 109.4 62 77.4
Gorai.011G125300 Gossypium raimondii HOM05D007303 ORTHO05D009231 1.1e-22 109.4 62 77.4
Gorai.011G125800 Gossypium raimondii HOM05D007303 ORTHO05D009231 1.1e-22 109.4 62 77.4
BcaB04g21249 Brassica carinata HOM05D007303 ORTHO05D009231 1.5e-22 109.0 66 78.8
CiPaw.10G166700 Carya illinoinensis HOM05D007303 ORTHO05D009231 1.5e-22 109.0 62 77.4
Aa31LG5G11350 Aethionema arabicum HOM05D007303 ORTHO05D009231 2.5e-22 108.2 65 73.8
ECA236G3381 Erigeron canadensis HOM05D007303 ORTHO05D009231 2.5e-22 108.2 62 80.6
Lj3g0023771 Lotus japonicus HOM05D007303 ORTHO05D009231 3.3e-22 107.8 67 73.1
GSVIVG01010904001 Vitis vinifera HOM05D007303 ORTHO05D009231 3.3e-22 107.8 60 76.7
Eucgr.K01299 Eucalyptus grandis HOM05D007303 ORTHO05D009231 7.3e-22 106.7 68 72.1
THA.LOC104816152 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 7.3e-22 106.7 58 81.0
Ah.15g089810 Amaranthus hybridus HOM05D007303 ORTHO05D009231 9.6e-22 106.3 59 78.0
Lsat_1_v5_gn_8_109701 Lactuca sativa HOM05D007303 ORTHO05D009231 1.2e-21 105.9 63 73.0
Aa31LG5G18650 Aethionema arabicum HOM05D007303 ORTHO05D009231 2.8e-21 104.8 65 73.8
Sp3g07060 Schrenkiella parvula HOM05D007303 ORTHO05D009231 3.6e-21 104.4 55 85.5
THA.LOC104820511 Tarenaya hassleriana HOM05D007303 ORTHO05D009231 3.6e-21 104.4 57 80.7
Duzib212G0558 Durio zibethinus HOM05D007303 ORTHO05D009231 8.1e-21 103.2 62 74.2
DCAR_023961 Daucus carota HOM05D007303 ORTHO05D009231 3.1e-20 101.3 59 81.4
Os05g0481600 Oryza sativa ssp. japonica HOM05D007303 ORTHO05D009231 3.1e-20 101.3 63 68.3
Potri.016G140900 Populus trichocarpa HOM05D007303 ORTHO05D009231 5.2e-20 100.5 69 72.5
Oeu028466.1 Olea europaea HOM05D007303 ORTHO05D009231 1.3e-18 95.9 67 65.7
SEGI_21984 Sequoiadendron giganteum HOM05D007303 ORTHO05D009231 2.4e-17 91.7 66 65.2
Cc09_g07100 Coffea canephora HOM05D007303 ORTHO05D009231 6.0e-16 87.0 62 66.1
QL07p031324 Quercus lobata HOM05D007303 ORTHO05D009231 7.8e-16 86.7 64 60.9
CiPaw.01G273900 Carya illinoinensis HOM05D007303 ORTHO05D009231 6.6e-15 83.6 58 67.2
Cc00_g04100 Coffea canephora HOM05D007303 ORTHO05D009231 1.1e-14 82.8 60 65.0
Manes.08G168000 Manihot esculenta HOM05D007303 ORTHO05D009231 1.6e-13 79.0 48 72.9
Sabra04G0157400 Salix brachista HOM05D007303 ORTHO05D009231 8.1e-13 76.6 47 72.3
CSS0019093 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 2.6e-11 71.6 36 88.9
MBI15_g31036_MAGBIO Magnolia biondii HOM05D007303 ORTHO05D009231 3.4e-11 71.2 38 81.6
CSS0017493 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 1.7e-10 68.9 36 83.3
CSS0048723 Camellia sinensis var. sinensis HOM05D007303 ORTHO05D009231 1.7e-10 68.9 36 83.3
Mapoly0148s0030 Marchantia polymorpha HOM05D007303 ORTHO05D009231 2.9e-10 68.2 58 51.7
A03p36440 Brassica napus HOM05D007303 ORTHO05D009231 3.8e-10 67.8 36 86.1
Zm00001eb290920 Zea mays HOM05D007303 ORTHO05D009231 6.4e-10 67.0 38 76.3
Cc07_g13470 Coffea canephora HOM05D007303 ORTHO05D009231 1.9e-09 65.5 43 65.1
Pp3c10_5690 Physcomitrium patens HOM05D007303 ORTHO05D009231 9.3e-09 63.2 52 48.1
Pp3c10_5720 Physcomitrium patens HOM05D007303 ORTHO05D009231 9.3e-09 63.2 52 48.1
CBR_g5630 Chara braunii HOM05D007303 ORTHO05D009231 3.5e-08 61.2 53 50.9


User provided reference genes

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