Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G65.101 Capsicum annuum HOM05D004923 ORTHO05D005940 1.4e-73 279.6 152 100.0
Sopen01g053000 Solanum pennellii HOM05D004923 ORTHO05D005940 1.4e-54 216.5 152 82.2
Solyc01g110960.4 Solanum lycopersicum HOM05D004923 ORTHO05D005940 2.7e-53 212.2 151 80.8
PGSC0003DMG400001646 Solanum tuberosum HOM05D004923 ORTHO05D005940 1.3e-31 140.2 152 61.2
Nitab4.5_0008768g0010 Nicotiana tabacum HOM05D004923 ORTHO05D005940 9.4e-30 134.0 96 78.1
Nitab4.5_0000003g0420 Nicotiana tabacum HOM05D004923 ORTHO05D005940 2.6e-27 125.9 91 76.9
CAN.G1329.24 Capsicum annuum HOM05D004923 ORTHO05D005940 4.4e-27 125.2 69 95.7
CAN.G652.6 Capsicum annuum HOM05D004923 ORTHO05D005940 4.5e-24 115.2 74 83.8
CAN.G909.12 Capsicum annuum HOM05D004923 ORTHO05D005940 8.5e-23 110.9 131 55.7
CSS0000935 Camellia sinensis var. sinensis HOM05D004923 ORTHO05D005940 1.2e-19 100.5 155 42.6
Oeu019603.1 Olea europaea HOM05D004923 ORTHO05D005940 3.5e-16 89.0 154 39.0
Peaxi162Scf00016g10236 Petunia axillaris HOM05D004923 ORTHO05D005940 7.8e-16 87.8 70 70.0
Oeu020434.1 Olea europaea HOM05D004923 ORTHO05D005940 2.3e-15 86.3 148 41.2
Cc02_g32730 Coffea canephora HOM05D004923 ORTHO05D005940 4.3e-14 82.0 149 38.3
Dinv40234 Davidia involucrata HOM05D004923 ORTHO05D005940 5.6e-14 81.6 154 37.7
Potri.013G028600 Populus trichocarpa HOM05D004923 ORTHO05D005940 6.1e-13 78.2 151 33.8
Manes.09G161700 Manihot esculenta HOM05D004923 ORTHO05D005940 1.0e-12 77.4 151 34.4
MSTRG.12109 Avicennia marina HOM05D004923 ORTHO05D005940 3.0e-12 75.9 146 36.3
Sabra05G0039600 Salix brachista HOM05D004923 ORTHO05D005940 8.9e-12 74.3 151 35.8
Actinidia19810 Actinidia chinensis HOM05D004923 ORTHO05D005940 1.5e-11 73.6 154 38.3
Lj9P678T27 Lonicera japonica HOM05D004923 ORTHO05D005940 1.5e-11 73.6 152 36.8
Rhsim05G0146200 Rhododendron simsii HOM05D004923 ORTHO05D005940 4.4e-11 72.0 155 38.7
Cpa.g.sc84.119 Carica papaya HOM05D004923 ORTHO05D005940 2.2e-10 69.7 154 31.8
Peaxi162Scf00413g00516 Petunia axillaris HOM05D004923 ORTHO05D005940 4.9e-10 68.6 103 46.6
Gohir.A11G260600 Gossypium hirsutum HOM05D004923 ORTHO05D005940 1.4e-09 67.0 148 29.1
Sabra13G0028900 Salix brachista HOM05D004923 ORTHO05D005940 1.4e-09 67.0 151 33.1
FAN02G0211 Fragaria x ananassa HOM05D004923 ORTHO05D005940 1.8e-09 66.6 116 35.3
FAN05G5260 Fragaria x ananassa HOM05D004923 ORTHO05D005940 1.8e-09 66.6 125 36.0
FAN09G1938 Fragaria x ananassa HOM05D004923 ORTHO05D005940 1.8e-09 66.6 116 35.3
FvH4_6g04961 Fragaria vesca HOM05D004923 ORTHO05D005940 2.4e-09 66.2 116 35.3
FAN05G2617 Fragaria x ananassa HOM05D004923 ORTHO05D005940 2.4e-09 66.2 116 34.5
DCAR_029454 Daucus carota HOM05D004923 ORTHO05D005940 4.1e-09 65.5 135 37.8
Gorai.007G291400 Gossypium raimondii HOM05D004923 ORTHO05D005940 4.1e-09 65.5 148 28.4
QL03p002854 Quercus lobata HOM05D004923 ORTHO05D005940 4.1e-09 65.5 150 34.0
SGA_v2.0_scaffold104G30165 Striga asiatica HOM05D004923 ORTHO05D005940 4.1e-09 65.5 151 34.4
CiPaw.07G012700 Carya illinoinensis HOM05D004923 ORTHO05D005940 7.0e-09 64.7 155 32.3
CANSAT54G1324 Cannabis sativa HOM05D004923 ORTHO05D005940 1.6e-08 63.5 157 33.8
Gohir.D11G270900 Gossypium hirsutum HOM05D004923 ORTHO05D005940 1.6e-08 63.5 148 27.7
RcHm_v2.0_Chr3g0453461 Rosa chinensis HOM05D004923 ORTHO05D005940 1.6e-08 63.5 127 29.9
FAN14G0846 Fragaria x ananassa HOM05D004923 ORTHO05D005940 2.0e-08 63.2 116 33.6
TAR362G1085 Trochodendron aralioides HOM05D004923 ORTHO05D005940 2.0e-08 63.2 151 33.1
arahy.Tifrunner.gnm1.ann1.96LETV Arachis hypogaea HOM05D004923 ORTHO05D005940 2.7e-08 62.8 152 29.6
Duzib177G0588 Durio zibethinus HOM05D004923 ORTHO05D005940 4.6e-08 62.0 150 29.3
Hma1.2p1_0702F.1_g206060 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 7.8e-08 61.2 148 29.7
Hma1.2p1_2453F.1_g322410 Hydrangea macrophylla HOM05D004923 ORTHO05D005940 7.8e-08 61.2 148 29.7
Thecc.05G297900 Theobroma cacao HOM05D004923 ORTHO05D005940 7.8e-08 61.2 149 28.9
Cfa006523 Carpinus fangiana HOM05D004923 ORTHO05D005940 5.0e-07 58.5 154 31.8
Glyma.10G157900 Glycine max HOM05D004923 ORTHO05D005940 1.1e-06 57.4 152 31.6
CARHR185930 Cardamine hirsuta HOM05D004923 ORTHO05D005940 3.3e-06 55.8 150 33.3
COL.COLO4_13559 Corchorus olitorius HOM05D004923 ORTHO05D005940 4.3e-06 55.5 150 28.0
Gohir.A08G212800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 4.3e-06 55.5 152 26.3
Gohir.D08G229800 Gossypium hirsutum HOM05D004923 ORTHO05D005940 4.3e-06 55.5 152 26.3
Gorai.004G244000 Gossypium raimondii HOM05D004923 ORTHO05D005940 4.3e-06 55.5 152 26.3
arahy.Tifrunner.gnm1.ann1.S9CKM7 Arachis hypogaea HOM05D004923 ORTHO05D005940 7.3e-06 54.7 107 32.7


User provided reference genes

Program Settings