Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G645.29 Capsicum annuum HOM05D006196 ORTHO05D007758 8.1e-188 660.2 325 100.0
Solyc11g006830.2 Solanum lycopersicum HOM05D006196 ORTHO05D007758 3.2e-168 595.1 327 86.9
Sopen11g002750 Solanum pennellii HOM05D006196 ORTHO05D007758 3.2e-168 595.1 327 86.9
PGSC0003DMG400023969 Solanum tuberosum HOM05D006196 ORTHO05D007758 1.0e-166 590.1 327 85.6
Nitab4.5_0003590g0020 Nicotiana tabacum HOM05D006196 ORTHO05D007758 1.1e-163 580.1 330 86.1
Nitab4.5_0002586g0080 Nicotiana tabacum HOM05D006196 ORTHO05D007758 1.7e-161 572.8 330 85.5
Oeu026604.1 Olea europaea HOM05D006196 ORTHO05D007758 5.7e-125 451.4 326 67.5
Peaxi162Scf00173g00018 Petunia axillaris HOM05D006196 ORTHO05D007758 2.2e-124 449.5 278 79.1
Actinidia18628 Actinidia chinensis HOM05D006196 ORTHO05D007758 9.1e-123 444.1 321 66.7
CSS0023098 Camellia sinensis var. sinensis HOM05D006196 ORTHO05D007758 2.0e-122 443.0 327 64.5
Cc02_g09600 Coffea canephora HOM05D006196 ORTHO05D007758 2.3e-118 429.5 329 63.8
Lj2C33T17 Lonicera japonica HOM05D006196 ORTHO05D007758 5.2e-118 428.3 333 64.0
MSTRG.9056 Avicennia marina HOM05D006196 ORTHO05D007758 4.8e-116 421.8 329 63.5
SalBow6G5730 Salvia bowleyana HOM05D006196 ORTHO05D007758 5.4e-115 418.3 328 61.6
Migut.F00871 Erythranthe guttata HOM05D006196 ORTHO05D007758 9.1e-115 417.5 328 62.2
Rhsim03G0097800 Rhododendron simsii HOM05D006196 ORTHO05D007758 4.5e-114 415.2 335 62.4
MSTRG.27569 Avicennia marina HOM05D006196 ORTHO05D007758 3.8e-113 412.1 328 60.4
SGA_v2.0_scaffold13G06435 Striga asiatica HOM05D006196 ORTHO05D007758 6.1e-111 404.8 374 56.1
Manes.07G086900 Manihot esculenta HOM05D006196 ORTHO05D007758 2.3e-110 402.9 325 60.6
TAR623G1022 Trochodendron aralioides HOM05D006196 ORTHO05D007758 3.0e-110 402.5 329 60.5
Hma1.2p1_0457F.1_g156990 Hydrangea macrophylla HOM05D006196 ORTHO05D007758 9.8e-109 397.5 302 63.6
Manes.10G062200 Manihot esculenta HOM05D006196 ORTHO05D007758 3.5e-106 389.0 322 60.2
Haze_03294 Corylus avellana HOM05D006196 ORTHO05D007758 1.0e-105 387.5 328 59.1
unitig_37.g12349 Utricularia gibba HOM05D006196 ORTHO05D007758 2.9e-105 386.0 328 58.2
HanXRQChr11g0342081 Helianthus annuus HOM05D006196 ORTHO05D007758 1.6e-103 380.2 302 59.6
QL04p046737 Quercus lobata HOM05D006196 ORTHO05D007758 6.1e-103 378.3 346 55.5
Lsat_1_v5_gn_2_104380 Lactuca sativa HOM05D006196 ORTHO05D007758 1.0e-102 377.5 314 58.6
MBI01_g16486_MAGBIO Magnolia biondii HOM05D006196 ORTHO05D007758 5.2e-102 375.2 330 57.0
Potri.010G239700 Populus trichocarpa HOM05D006196 ORTHO05D007758 5.2e-102 375.2 322 56.2
Atru.chr12.1044 Acer truncatum HOM05D006196 ORTHO05D007758 6.8e-102 374.8 323 58.2
Thecc.10G115000 Theobroma cacao HOM05D006196 ORTHO05D007758 2.0e-101 373.2 331 55.0
Sabra10G0187700 Salix brachista HOM05D006196 ORTHO05D007758 9.8e-101 370.9 322 56.8
COL.COLO4_29746 Corchorus olitorius HOM05D006196 ORTHO05D007758 6.4e-100 368.2 334 55.1
Lj5g0013601 Lotus japonicus HOM05D006196 ORTHO05D007758 1.4e-99 367.1 326 56.4
CiPaw.13G040700 Carya illinoinensis HOM05D006196 ORTHO05D007758 5.4e-99 365.2 331 57.1
Duzib114G0383 Durio zibethinus HOM05D006196 ORTHO05D007758 7.0e-99 364.8 332 53.9
ECA238G1493 Erigeron canadensis HOM05D006196 ORTHO05D007758 9.2e-99 364.4 314 55.7
HanXRQChr07g0194291 Helianthus annuus HOM05D006196 ORTHO05D007758 4.6e-98 362.1 304 57.2
Medtr1g111960 Medicago truncatula HOM05D006196 ORTHO05D007758 2.3e-97 359.8 333 54.7
Glyma.20G111300 Glycine max HOM05D006196 ORTHO05D007758 5.0e-97 358.6 331 53.8
Cpa.g.sc56.1 Carica papaya HOM05D006196 ORTHO05D007758 6.6e-97 358.2 335 53.7
Glyma.10G278400 Glycine max HOM05D006196 ORTHO05D007758 1.5e-96 357.1 330 53.6
CANSAT56G0980 Cannabis sativa HOM05D006196 ORTHO05D007758 9.5e-96 354.4 318 57.5
VMungo0720G0291 Vigna mungo HOM05D006196 ORTHO05D007758 9.5e-96 354.4 328 53.0
Sabra08G0013000 Salix brachista HOM05D006196 ORTHO05D007758 1.2e-95 354.0 319 55.5
ClCG08G008290 Citrullus lanatus HOM05D006196 ORTHO05D007758 1.6e-95 353.6 335 56.1
Ca_25660_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 2.8e-95 352.8 332 53.6
Potri.008G019700 Populus trichocarpa HOM05D006196 ORTHO05D007758 2.8e-95 352.8 319 54.9
CsaV3_6G004260 Cucumis sativus L. HOM05D006196 ORTHO05D007758 4.7e-95 352.1 338 54.7
Psat0s1903g0040 Pisum sativum HOM05D006196 ORTHO05D007758 6.2e-95 351.7 333 53.2
THA.LOC104811342 Tarenaya hassleriana HOM05D006196 ORTHO05D007758 1.8e-94 350.1 356 50.8
Lalb_Chr06g0166391 Lupinus albus HOM05D006196 ORTHO05D007758 6.8e-94 348.2 332 51.5
Sed0008038 Sechium edule HOM05D006196 ORTHO05D007758 1.2e-93 347.4 331 56.5
MELO3C019897.2 Cucumis melo HOM05D006196 ORTHO05D007758 1.5e-93 347.1 338 54.1
Phvul.007G023000 Phaseolus vulgaris HOM05D006196 ORTHO05D007758 2.6e-93 346.3 328 52.7
GSVIVG01010724001 Vitis vinifera HOM05D006196 ORTHO05D007758 9.8e-93 344.4 260 64.2
DCAR_019003 Daucus carota HOM05D006196 ORTHO05D007758 3.7e-92 342.4 334 53.6
AT3G54290 Arabidopsis thaliana HOM05D006196 ORTHO05D007758 4.9e-92 342.0 346 51.4
arahy.Tifrunner.gnm1.ann1.EL78PJ Arachis hypogaea HOM05D006196 ORTHO05D007758 6.4e-92 341.7 333 50.8
Sp5g08100 Schrenkiella parvula HOM05D006196 ORTHO05D007758 1.4e-91 340.5 349 51.0
Sed0021157 Sechium edule HOM05D006196 ORTHO05D007758 1.9e-91 340.1 348 52.3
AL5G35330 Arabidopsis lyrata HOM05D006196 ORTHO05D007758 2.4e-91 339.7 349 51.6
TWI38G1704 Tripterygium wilfordii HOM05D006196 ORTHO05D007758 4.1e-91 339.0 334 54.2
Gorai.012G020000 Gossypium raimondii HOM05D006196 ORTHO05D007758 5.4e-91 338.6 326 51.2
arahy.Tifrunner.gnm1.ann1.N25XM0 Arachis hypogaea HOM05D006196 ORTHO05D007758 7.0e-91 338.2 333 50.8
Carub.0005s2088 Capsella rubella HOM05D006196 ORTHO05D007758 7.0e-91 338.2 353 51.3
BcaC02g09075 Brassica carinata HOM05D006196 ORTHO05D007758 2.7e-90 336.3 320 53.1
Gohir.D04G017300 Gossypium hirsutum HOM05D006196 ORTHO05D007758 2.7e-90 336.3 326 51.2
CARHR164220 Cardamine hirsuta HOM05D006196 ORTHO05D007758 4.6e-90 335.5 352 49.4
PSO801G0620 Papaver somniferum HOM05D006196 ORTHO05D007758 4.6e-90 335.5 335 51.9
Gohir.A05G398600 Gossypium hirsutum HOM05D006196 ORTHO05D007758 7.8e-90 334.7 326 50.6
TPR.G2427 Trifolium pratense HOM05D006196 ORTHO05D007758 6.6e-89 331.6 333 53.2
BcaB02g08483 Brassica carinata HOM05D006196 ORTHO05D007758 1.1e-88 330.9 329 52.0
PSO339G1429 Papaver somniferum HOM05D006196 ORTHO05D007758 1.1e-88 330.9 338 50.6
Aa31sc392G30 Aethionema arabicum HOM05D006196 ORTHO05D007758 1.5e-88 330.5 341 48.7
Thhalv10010495m.g Eutrema salsugineum HOM05D006196 ORTHO05D007758 3.3e-88 329.3 353 49.9
BraA04t16248Z Brassica rapa HOM05D006196 ORTHO05D007758 4.3e-88 328.9 321 53.3
A04p05460 Brassica napus HOM05D006196 ORTHO05D007758 7.3e-88 328.2 321 52.6
Medtr1g050385 Medicago truncatula HOM05D006196 ORTHO05D007758 9.5e-88 327.8 348 49.1
Dinv10931 Davidia involucrata HOM05D006196 ORTHO05D007758 4.7e-87 325.5 255 62.4
Hund06787 Selenicereus undatus HOM05D006196 ORTHO05D007758 1.8e-86 323.6 328 51.8
A09p47290 Brassica napus HOM05D006196 ORTHO05D007758 4.0e-86 322.4 367 48.0
C08p29520 Brassica napus HOM05D006196 ORTHO05D007758 6.8e-86 321.6 365 47.7
TPR.G10627 Trifolium pratense HOM05D006196 ORTHO05D007758 8.9e-86 321.2 350 48.6
BraA09t40190Z Brassica rapa HOM05D006196 ORTHO05D007758 1.5e-85 320.5 367 46.9
BolC8t50558H Brassica oleracea HOM05D006196 ORTHO05D007758 3.4e-85 319.3 365 47.4
C04p38140 Brassica napus HOM05D006196 ORTHO05D007758 8.3e-84 314.7 328 50.9
Prupe.2G067800 Prunus persica HOM05D006196 ORTHO05D007758 2.4e-83 313.2 350 49.4
Ah.13g074540 Amaranthus hybridus HOM05D006196 ORTHO05D007758 3.2e-83 312.8 311 51.1
Sc09g0005310 Simmondsia chinensis HOM05D006196 ORTHO05D007758 3.2e-83 312.8 318 50.9
Lj6g0028083 Lotus japonicus HOM05D006196 ORTHO05D007758 1.6e-82 310.5 342 47.4
CDE08G0664 Ceratophyllum demersum HOM05D006196 ORTHO05D007758 7.8e-82 308.1 313 49.5
Glyma.10G111100 Glycine max HOM05D006196 ORTHO05D007758 8.6e-81 304.7 344 47.7
Ah.06g186650 Amaranthus hybridus HOM05D006196 ORTHO05D007758 4.3e-80 302.4 336 47.6
Lalb_Chr01g0010431 Lupinus albus HOM05D006196 ORTHO05D007758 7.3e-80 301.6 375 43.2
MD07G1059000 Malus domestica HOM05D006196 ORTHO05D007758 2.3e-78 296.6 355 46.8
Psat6g093840 Pisum sativum HOM05D006196 ORTHO05D007758 2.0e-77 293.5 340 45.0
MD07G1059300 Malus domestica HOM05D006196 ORTHO05D007758 5.8e-77 292.0 361 45.4
Ciclev10015947m.g Citrus clementina HOM05D006196 ORTHO05D007758 8.4e-68 261.5 317 47.6
ATR0820G221 Amborella trichopoda HOM05D006196 ORTHO05D007758 5.4e-67 258.8 279 48.0
BcaB01g00209 Brassica carinata HOM05D006196 ORTHO05D007758 3.1e-62 243.0 365 40.0
BolC4t25389H Brassica oleracea HOM05D006196 ORTHO05D007758 8.7e-57 224.9 208 55.3
unitig_46.g18638 Utricularia gibba HOM05D006196 ORTHO05D007758 2.5e-56 223.4 178 62.9
Os01g0861700 Oryza sativa ssp. japonica HOM05D006196 ORTHO05D007758 1.9e-48 197.2 333 36.9
HPP92_026086 Vanilla planifolia HOM05D006196 ORTHO05D007758 5.6e-48 195.7 341 36.7
HPP92_025137 Vanilla planifolia HOM05D006196 ORTHO05D007758 1.1e-46 191.4 341 36.1
SMO146G0289 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 1.2e-45 188.0 246 38.2
Zm00001eb147080 Zea mays HOM05D006196 ORTHO05D007758 5.8e-45 185.7 339 35.4
Mapoly0016s0155 Marchantia polymorpha HOM05D006196 ORTHO05D007758 4.6e-42 176.0 217 40.6
Ca_20266_v3 Cicer arietinum L. HOM05D006196 ORTHO05D007758 2.6e-37 160.2 210 41.4
AagrBONN_evm.TU.Sc2ySwM_228.4853 Anthoceros agrestis HOM05D006196 ORTHO05D007758 1.0e-36 158.3 221 38.0
Pp3c13_16840 Physcomitrium patens HOM05D006196 ORTHO05D007758 5.0e-36 156.0 222 39.6
Pp3c16_23080 Physcomitrium patens HOM05D006196 ORTHO05D007758 8.5e-36 155.2 231 37.7
SMO198G0051 Selaginella moellendorffii HOM05D006196 ORTHO05D007758 1.4e-35 154.5 227 40.1
Pp3c25_11830 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.5e-35 153.7 231 37.2
Pp3c12_15440 Physcomitrium patens HOM05D006196 ORTHO05D007758 7.9e-34 148.7 203 38.9
Pp3c6_4750 Physcomitrium patens HOM05D006196 ORTHO05D007758 3.9e-33 146.4 232 33.6
Pp3c3_21020 Physcomitrium patens HOM05D006196 ORTHO05D007758 9.7e-32 141.7 215 38.6
Pp3c16_23090 Physcomitrium patens HOM05D006196 ORTHO05D007758 1.3e-31 141.4 208 34.6
Pp3c25_11860 Physcomitrium patens HOM05D006196 ORTHO05D007758 2.2e-31 140.6 360 28.9
arahy.Tifrunner.gnm1.ann1.5GK804 Arachis hypogaea HOM05D006196 ORTHO05D007758 7.2e-27 125.6 120 50.8
Actinidia02755 Actinidia chinensis HOM05D006196 ORTHO05D007758 2.1e-26 124.0 85 69.4
arahy.Tifrunner.gnm1.ann1.K1D1LI Arachis hypogaea HOM05D006196 ORTHO05D007758 1.3e-23 114.8 117 49.6
Zm00001eb366830 Zea mays HOM05D006196 ORTHO05D007758 4.1e-22 109.8 131 44.3
CBR_g31351 Chara braunii HOM05D006196 ORTHO05D007758 9.1e-22 108.6 162 34.0
unitig_46.g18639 Utricularia gibba HOM05D006196 ORTHO05D007758 1.1e-19 101.7 92 54.3


User provided reference genes

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