Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G64.12 Capsicum annuum HOM05D000361 ORTHO05D031626 1.3e-48 196.1 99 100.0
CAN.G809.9 Capsicum annuum HOM05D000361 ORTHO05D008294 7.2e-39 163.7 90 91.1
Solyc02g082180.3 Solanum lycopersicum HOM05D000361 ORTHO05D008294 2.4e-34 148.7 88 86.4
Sopen02g026840 Solanum pennellii HOM05D000361 ORTHO05D008294 2.4e-34 148.7 88 86.4
PGSC0003DMG400013633 Solanum tuberosum HOM05D000361 ORTHO05D008294 2.4e-34 148.7 88 86.4
Nitab4.5_0001815g0090 Nicotiana tabacum HOM05D000361 ORTHO05D008294 4.1e-34 147.9 88 84.1
Nitab4.5_0007687g0010 Nicotiana tabacum HOM05D000361 ORTHO05D008294 4.1e-34 147.9 88 84.1
Peaxi162Scf00036g00321 Petunia axillaris HOM05D000361 ORTHO05D008294 5.9e-33 144.1 87 82.8
Lj6g0011881 Lotus japonicus HOM05D000361 ORTHO05D008294 1.0e-32 143.3 90 77.8
Ciclev10014269m.g Citrus clementina HOM05D000361 ORTHO05D008294 5.6e-31 137.5 87 75.9
DCAR_003731 Daucus carota HOM05D000361 ORTHO05D008294 7.3e-31 137.1 93 74.2
GSVIVG01003253001 Vitis vinifera HOM05D000361 ORTHO05D008294 9.5e-31 136.7 91 76.9
Sc24g0002810 Simmondsia chinensis HOM05D000361 ORTHO05D008294 1.2e-30 136.3 90 73.3
Dinv07937 Davidia involucrata HOM05D000361 ORTHO05D008294 1.6e-30 136.0 91 74.7
Dinv18416 Davidia involucrata HOM05D000361 ORTHO05D008294 1.6e-30 136.0 91 74.7
Rhsim13G0136200 Rhododendron simsii HOM05D000361 ORTHO05D008294 2.8e-30 135.2 92 76.1
CiPaw.09G140700 Carya illinoinensis HOM05D000361 ORTHO05D008294 3.6e-30 134.8 91 75.8
PGR044G0817 Punica granatum HOM05D000361 ORTHO05D008294 3.6e-30 134.8 88 77.3
CSS0044464 Camellia sinensis var. sinensis HOM05D000361 ORTHO05D008294 6.1e-30 134.0 95 70.5
Nn1g09868 Nelumbo nucifera HOM05D000361 ORTHO05D008294 8.0e-30 133.7 88 73.9
SalBow6G3398 Salvia bowleyana HOM05D000361 ORTHO05D008294 1.0e-29 133.3 88 76.1
VMungo1309G2334 Vigna mungo HOM05D000361 ORTHO05D008294 1.0e-29 133.3 89 71.9
CANSAT35G1399 Cannabis sativa HOM05D000361 ORTHO05D008294 1.4e-29 132.9 91 70.3
Phvul.009G245600 Phaseolus vulgaris HOM05D000361 ORTHO05D008294 1.4e-29 132.9 87 73.6
vmacro03573 Vaccinium macrocarpon HOM05D000361 ORTHO05D008294 1.8e-29 132.5 94 73.4
Cfa001165 Carpinus fangiana HOM05D000361 ORTHO05D008294 3.0e-29 131.7 91 71.4
Cc09_g04600 Coffea canephora HOM05D000361 ORTHO05D008294 3.0e-29 131.7 90 76.7
Haze_05186 Corylus avellana HOM05D000361 ORTHO05D008294 3.0e-29 131.7 91 71.4
FAN25G0043 Fragaria x ananassa HOM05D000361 ORTHO05D008294 4.0e-29 131.3 91 72.5
FAN25G0195 Fragaria x ananassa HOM05D000361 ORTHO05D008294 4.0e-29 131.3 91 72.5
RcHm_v2.0_Chr5g0022071 Rosa chinensis HOM05D000361 ORTHO05D008294 5.2e-29 131.0 91 72.5
FvH4_3g13360 Fragaria vesca HOM05D000361 ORTHO05D008294 2.0e-28 129.0 91 71.4
FAN11G3268 Fragaria x ananassa HOM05D000361 ORTHO05D008294 2.0e-28 129.0 91 71.4
FAN16G0385 Fragaria x ananassa HOM05D000361 ORTHO05D008294 2.0e-28 129.0 91 71.4
FAN21G0569 Fragaria x ananassa HOM05D000361 ORTHO05D008294 2.0e-28 129.0 91 71.4
Ca_17753_v3 Cicer arietinum L. HOM05D000361 ORTHO05D008294 3.4e-28 128.3 92 68.5
QL11p010760 Quercus lobata HOM05D000361 ORTHO05D008294 7.5e-28 127.1 93 67.7
Lj1C1152G4 Lonicera japonica HOM05D000361 ORTHO05D008294 2.2e-27 125.6 89 71.9
SGA_v2.0_scaffold341G49368 Striga asiatica HOM05D000361 ORTHO05D008294 3.7e-27 124.8 88 69.3
Lsat_1_v5_gn_9_100181 Lactuca sativa HOM05D000361 ORTHO05D008294 6.4e-27 124.0 87 70.1
TAR627G0013 Trochodendron aralioides HOM05D000361 ORTHO05D008294 6.4e-27 124.0 92 69.6
Prupe.4G121000 Prunus persica HOM05D000361 ORTHO05D008294 1.1e-26 123.2 96 67.7
Glyma.09G047300 Glycine max HOM05D000361 ORTHO05D008294 3.2e-26 121.7 89 68.5
TWI63G1117 Tripterygium wilfordii HOM05D000361 ORTHO05D008294 3.2e-26 121.7 88 64.8
Oeu039911.1 Olea europaea HOM05D000361 ORTHO05D008294 4.1e-26 121.3 83 72.3
arahy.Tifrunner.gnm1.ann1.76Y6MV Arachis hypogaea HOM05D000361 ORTHO05D008294 5.4e-26 120.9 89 66.3
arahy.Tifrunner.gnm1.ann1.QR0DXW Arachis hypogaea HOM05D000361 ORTHO05D008294 5.4e-26 120.9 89 66.3
Medtr8g090000 Medicago truncatula HOM05D000361 ORTHO05D008294 7.0e-26 120.6 92 63.0
Lalb_Chr18g0051851 Lupinus albus HOM05D000361 ORTHO05D008294 9.2e-26 120.2 92 65.2
MSTRG.13294 Avicennia marina HOM05D000361 ORTHO05D008294 1.2e-25 119.8 90 68.9
Manes.16G060200 Manihot esculenta HOM05D000361 ORTHO05D008294 1.2e-25 119.8 90 68.9
Psat7g056760 Pisum sativum HOM05D000361 ORTHO05D008294 2.0e-25 119.0 92 65.2
ECA240G0581 Erigeron canadensis HOM05D000361 ORTHO05D008294 2.7e-25 118.6 91 63.7
PSO675G8445 Papaver somniferum HOM05D000361 ORTHO05D008294 4.6e-25 117.9 87 69.0
Glyma.15G154900 Glycine max HOM05D000361 ORTHO05D008294 7.8e-25 117.1 89 65.2
PSO541G2719 Papaver somniferum HOM05D000361 ORTHO05D008294 7.8e-25 117.1 87 69.0
PSO541G6368 Papaver somniferum HOM05D000361 ORTHO05D008294 7.8e-25 117.1 87 69.0
Aqoxy1G01354 Aquilegia oxysepala HOM05D000361 ORTHO05D008294 1.3e-24 116.3 87 66.7
Cpa.g.sc30.68 Carica papaya HOM05D000361 ORTHO05D008294 3.9e-24 114.8 87 63.2
MELO3C006995.2 Cucumis melo HOM05D000361 ORTHO05D008294 6.6e-24 114.0 91 65.9
SalBow6G5453 Salvia bowleyana HOM05D000361 ORTHO05D008294 6.6e-24 114.0 127 52.8
Sabra01G0052300 Salix brachista HOM05D000361 ORTHO05D008294 8.6e-24 113.6 90 67.8
Potri.001G074000 Populus trichocarpa HOM05D000361 ORTHO05D008294 1.1e-23 113.2 90 66.7
HanXRQChr07g0187741 Helianthus annuus HOM05D000361 ORTHO05D008294 4.3e-23 111.3 90 62.2
ClCG01G025960 Citrullus lanatus HOM05D000361 ORTHO05D008294 5.6e-23 110.9 91 63.7
Duzib132G1205 Durio zibethinus HOM05D000361 ORTHO05D008294 9.5e-23 110.2 86 59.3
EL10Ac7g17302 Beta vulgaris HOM05D000361 ORTHO05D008294 1.2e-22 109.8 92 64.1
CsaV3_6G053180 Cucumis sativus L. HOM05D000361 ORTHO05D008294 1.2e-22 109.8 91 63.7
Gohir.A03G218100 Gossypium hirsutum HOM05D000361 ORTHO05D008294 3.6e-22 108.2 87 59.8
Gohir.D02G240100 Gossypium hirsutum HOM05D000361 ORTHO05D008294 3.6e-22 108.2 87 59.8
unitig_37.g13054 Utricularia gibba HOM05D000361 ORTHO05D008294 3.6e-22 108.2 89 66.3
Ah.15g091830 Amaranthus hybridus HOM05D000361 ORTHO05D008294 6.2e-22 107.5 94 63.8
AUR62042103 Chenopodium quinoa HOM05D000361 ORTHO05D008294 6.2e-22 107.5 92 63.0
TPR.G6256 Trifolium pratense HOM05D000361 ORTHO05D008294 8.0e-22 107.1 92 57.6
COL.COLO4_25023 Corchorus olitorius HOM05D000361 ORTHO05D008294 1.4e-21 106.3 86 58.1
Medtr2g437540 Medicago truncatula HOM05D000361 ORTHO05D008294 1.4e-21 106.3 88 59.1
Atru.chr10.231 Acer truncatum HOM05D000361 ORTHO05D008294 1.8e-21 105.9 66 75.8
Sed0009371 Sechium edule HOM05D000361 ORTHO05D008294 2.3e-21 105.5 87 63.2
Thecc.02G000800 Theobroma cacao HOM05D000361 ORTHO05D008294 2.3e-21 105.5 86 55.8
SHI08119 Sapria himalayana HOM05D000361 ORTHO05D008294 6.8e-21 104.0 87 57.5
Hund20134 Selenicereus undatus HOM05D000361 ORTHO05D008294 6.8e-21 104.0 92 60.9
MBI06_g04183_MAGBIO Magnolia biondii HOM05D000361 ORTHO05D031626 8.9e-21 103.6 95 56.8
MBI06_g26561_MAGBIO Magnolia biondii HOM05D000361 ORTHO05D008294 8.9e-21 103.6 95 56.8
AUR62040986 Chenopodium quinoa HOM05D000361 ORTHO05D008294 1.5e-20 102.8 92 60.9
Eucgr.D00002 Eucalyptus grandis HOM05D000361 ORTHO05D008294 1.5e-20 102.8 89 59.6
MD05G1242400 Malus domestica HOM05D000361 ORTHO05D008294 4.4e-20 101.3 107 52.3
CDE10G0589 Ceratophyllum demersum HOM05D000361 ORTHO05D008294 1.3e-19 99.8 92 57.6
ATR0737G139 Amborella trichopoda HOM05D000361 ORTHO05D008294 1.7e-19 99.4 88 55.7
HPP92_000506 Vanilla planifolia HOM05D000361 ORTHO05D008294 1.7e-19 99.4 95 53.7
MD10G1224200 Malus domestica HOM05D000361 ORTHO05D008294 3.7e-19 98.2 104 50.0
Zm00001eb284360 Zea mays HOM05D000361 ORTHO05D008294 4.1e-18 94.7 88 54.5
Zm00001eb350340 Zea mays HOM05D000361 ORTHO05D008294 7.0e-18 94.0 90 56.7
Aa31LG9G8530 Aethionema arabicum HOM05D000361 ORTHO05D008294 1.2e-17 93.2 87 51.7
BcaC06g34528 Brassica carinata HOM05D000361 ORTHO05D008294 1.2e-17 93.2 85 54.1
C07p27530 Brassica napus HOM05D000361 ORTHO05D008294 1.2e-17 93.2 85 54.1
BolC7t43284H Brassica oleracea HOM05D000361 ORTHO05D008294 1.2e-17 93.2 85 54.1
BcaC06g31601 Brassica carinata HOM05D000361 ORTHO05D008294 1.6e-17 92.8 85 52.9
A06p47040 Brassica napus HOM05D000361 ORTHO05D008294 3.5e-17 91.7 85 54.1
BraA06t27577Z Brassica rapa HOM05D000361 ORTHO05D008294 3.5e-17 91.7 85 54.1
Thhalv10000779m.g Eutrema salsugineum HOM05D000361 ORTHO05D008294 6.0e-17 90.9 87 50.6
Os05g0235800 Oryza sativa ssp. japonica HOM05D000361 ORTHO05D008294 6.0e-17 90.9 91 51.6
Sp2g09450 Schrenkiella parvula HOM05D000361 ORTHO05D008294 6.0e-17 90.9 87 50.6
AL8G14990 Arabidopsis lyrata HOM05D000361 ORTHO05D008294 1.7e-16 89.4 87 49.4
Carub.0008s0363 Capsella rubella HOM05D000361 ORTHO05D008294 1.7e-16 89.4 87 50.6
AT5G44635 Arabidopsis thaliana HOM05D000361 ORTHO05D008294 3.9e-16 88.2 88 47.7
CAN.G1862.3 Capsicum annuum HOM05D000361 ORTHO05D000137 8.6e-16 87.0 50 88.0
SMO364G0539 Selaginella moellendorffii HOM05D000361 ORTHO05D008294 1.1e-15 86.7 97 45.4
BcaC03g16683 Brassica carinata HOM05D000361 ORTHO05D008294 2.5e-15 85.5 88 47.7
C02p45220 Brassica napus HOM05D000361 ORTHO05D008294 2.5e-15 85.5 88 47.7
CARHR178260 Cardamine hirsuta HOM05D000361 ORTHO05D008294 7.3e-15 84.0 93 45.2
BolC2t10553H Brassica oleracea HOM05D000361 ORTHO05D008294 1.6e-14 82.8 88 46.6
TPR.G31384 Trifolium pratense HOM05D000002 ORTHO05D000001 1.6e-14 82.8 91 49.5
SEGI_18737 Sequoiadendron giganteum HOM05D000361 ORTHO05D008294 1.5e-12 76.3 90 46.7
CBR_g12702 Chara braunii HOM05D000361 ORTHO05D008294 1.4e-10 69.7 112 36.6
Mapoly0119s0016 Marchantia polymorpha HOM05D000361 ORTHO05D008294 5.4e-10 67.8 108 38.0
Pp3c23_390 Physcomitrium patens HOM05D000361 ORTHO05D008294 2.7e-09 65.5 104 35.6
arahy.Tifrunner.gnm1.ann1.CFQ5KB Arachis hypogaea HOM05D000361 ORTHO05D031626 7.8e-09 63.9 44 68.2
arahy.Tifrunner.gnm1.ann1.PX7MES Arachis hypogaea HOM05D004117 ORTHO05D004520 3.0e-08 62.0 75 42.7
BcaB07g30509 Brassica carinata HOM05D000361 ORTHO05D008294 1.1e-07 60.1 73 42.5
AagrBONN_evm.TU.Sc2ySwM_368.1744 Anthoceros agrestis HOM05D000361 ORTHO05D008294 7.3e-07 57.4 95 35.8


User provided reference genes

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