Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G639.18 Capsicum annuum HOM05D000095 ORTHO05D115291 7.3e-119 430.6 228 100.0
Solyc09g042677.1 Solanum lycopersicum HOM05D000095 ORTHO05D011502 2.5e-18 96.7 70 61.4
PGSC0003DMG400038019 Solanum tuberosum HOM05D000095 ORTHO05D011502 1.2e-17 94.4 69 60.9
PGSC0003DMG400006209 Solanum tuberosum HOM05D000095 ORTHO05D011502 2.8e-17 93.2 66 60.6
CAN.G888.20 Capsicum annuum HOM05D000095 ORTHO05D011502 3.6e-17 92.8 69 63.8
Sopen09g002440 Solanum pennellii HOM05D000095 ORTHO05D011502 8.1e-17 91.7 69 62.3
CAN.G65.219 Capsicum annuum HOM05D000095 ORTHO05D011502 1.1e-16 91.3 72 59.7
Sopen09g002460 Solanum pennellii HOM05D000095 ORTHO05D011502 5.2e-16 89.0 69 56.5
Sopen09g002480 Solanum pennellii HOM05D000095 ORTHO05D011502 5.2e-16 89.0 69 56.5
PGSC0003DMG400039152 Solanum tuberosum HOM05D000095 ORTHO05D011502 6.8e-16 88.6 69 59.4
Solyc09g007580.3 Solanum lycopersicum HOM05D000095 ORTHO05D011502 8.9e-16 88.2 69 58.0
PGSC0003DMG400001750 Solanum tuberosum HOM05D000095 ORTHO05D011502 1.2e-15 87.8 69 56.5
Solyc09g007570.3 Solanum lycopersicum HOM05D000095 ORTHO05D011502 1.5e-15 87.4 69 60.9
PGSC0003DMG400001749 Solanum tuberosum HOM05D000095 ORTHO05D011502 2.6e-15 86.7 69 59.4
PGSC0003DMG400001751 Solanum tuberosum HOM05D000095 ORTHO05D011502 3.4e-15 86.3 69 55.1
CAN.G65.217 Capsicum annuum HOM05D000095 ORTHO05D011502 2.9e-14 83.2 72 58.3
CAN.G888.21 Capsicum annuum HOM05D000095 ORTHO05D011502 8.3e-14 81.6 69 56.5
PGSC0003DMG400045164 Solanum tuberosum HOM05D000095 ORTHO05D011502 1.4e-13 80.9 66 57.6
PGSC0003DMG400013508 Solanum tuberosum HOM05D000095 ORTHO05D011502 2.1e-12 77.0 70 54.3
Nitab4.5_0002184g0040 Nicotiana tabacum HOM05D000095 ORTHO05D011502 3.3e-10 69.7 72 45.8
PGSC0003DMG401009242 Solanum tuberosum HOM05D000095 ORTHO05D011502 7.3e-10 68.6 69 53.6
Solyc11g071500.3 Solanum lycopersicum HOM05D000095 ORTHO05D016174 1.6e-09 67.4 70 50.0
CAN.G639.10 Capsicum annuum HOM05D012514 ORTHO05D115427 2.1e-09 67.0 55 58.2
Nitab4.5_0000271g0130 Nicotiana tabacum HOM05D000095 ORTHO05D011502 2.1e-09 67.0 69 47.8
Sopen11g029190 Solanum pennellii HOM05D000095 ORTHO05D016174 2.1e-09 67.0 70 51.4
SalBow5G0412 Salvia bowleyana HOM05D000095 ORTHO05D000330 2.8e-09 66.6 69 43.5
CAN.G639.16 Capsicum annuum HOM05D000095 ORTHO05D011502 3.6e-09 66.2 55 58.2
PGSC0003DMG400018702 Solanum tuberosum HOM05D000095 ORTHO05D016174 3.6e-09 66.2 69 49.3
SGA_v2.0_scaffold132G34574 Striga asiatica HOM05D000095 ORTHO05D000330 4.7e-09 65.9 79 44.3
Rhsim10G0191800 Rhododendron simsii HOM05D000095 ORTHO05D015271 6.2e-09 65.5 76 43.4
FAN23G1132 Fragaria x ananassa HOM05D000095 ORTHO05D000330 8.1e-09 65.1 65 43.1
FAN23G2915 Fragaria x ananassa HOM05D000095 ORTHO05D000330 8.1e-09 65.1 65 43.1
FAN26G3092 Fragaria x ananassa HOM05D000095 ORTHO05D000330 8.1e-09 65.1 65 43.1
Dinv19099 Davidia involucrata HOM05D000095 ORTHO05D000330 1.4e-08 64.3 66 47.0
FvH4_1g10080 Fragaria vesca HOM05D000095 ORTHO05D000330 1.4e-08 64.3 65 43.1
FAN19G2914 Fragaria x ananassa HOM05D000095 ORTHO05D000330 1.4e-08 64.3 65 43.1
CAN.G639.6 Capsicum annuum HOM05D000095 ORTHO05D114996 2.3e-08 63.5 55 60.0
Peaxi162Scf00526g00520 Petunia axillaris HOM05D000095 ORTHO05D011502 3.1e-08 63.2 69 46.4
RcHm_v2.0_Chr3g0481941 Rosa chinensis HOM05D000002 ORTHO05D000001 4.0e-08 62.8 51 58.8
RcHm_v2.0_Chr5g0017911 Rosa chinensis HOM05D000002 ORTHO05D000001 4.0e-08 62.8 51 58.8
FvH4_5g31431 Fragaria vesca HOM05D000002 ORTHO05D004433 5.2e-08 62.4 45 64.4
ECA240G0479 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.2e-07 61.2 50 56.0
SalBow6G6783 Salvia bowleyana HOM05D000095 ORTHO05D000330 1.2e-07 61.2 66 45.5
Atru.chr12.1051 Acer truncatum HOM05D000095 ORTHO05D000330 2.0e-07 60.5 78 35.9
MSTRG.24185 Avicennia marina HOM05D000095 ORTHO05D011502 2.0e-07 60.5 67 41.8
PGSC0003DMG400009252 Solanum tuberosum HOM05D000095 ORTHO05D011502 2.0e-07 60.5 54 59.3
Migut.L00854 Erythranthe guttata HOM05D000095 ORTHO05D012712 3.4e-07 59.7 86 36.0
Lalb_Chr10g0095501 Lupinus albus HOM05D000095 ORTHO05D000330 3.4e-07 59.7 85 35.3
GSVIVG01008241001 Vitis vinifera HOM05D000095 ORTHO05D000330 3.4e-07 59.7 65 40.0
C09p68420 Brassica napus HOM05D000095 ORTHO05D000330 5.8e-07 58.9 81 39.5
BolC9t59589H Brassica oleracea HOM05D000095 ORTHO05D000330 5.8e-07 58.9 81 39.5
Dinv28274 Davidia involucrata HOM05D000095 ORTHO05D000330 7.6e-07 58.5 92 35.9
Oeu062427.1 Olea europaea HOM05D000095 ORTHO05D000330 7.6e-07 58.5 65 41.5
SHI16130 Sapria himalayana HOM05D000002 ORTHO05D000001 7.6e-07 58.5 51 47.1
SHI15360 Sapria himalayana HOM05D000002 ORTHO05D000001 9.9e-07 58.2 51 47.1
SHI16963 Sapria himalayana HOM05D000002 ORTHO05D000001 9.9e-07 58.2 53 45.3
SHI21207 Sapria himalayana HOM05D000095 ORTHO05D000330 9.9e-07 58.2 93 34.4
ECA234G3440 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.3e-06 57.8 50 54.0
Nitab4.5_0001183g0050 Nicotiana tabacum HOM05D000095 ORTHO05D016174 1.3e-06 57.8 69 42.0
SHI25865 Sapria himalayana HOM05D000002 ORTHO05D000001 1.3e-06 57.8 55 43.6
A10p28210 Brassica napus HOM05D000095 ORTHO05D000330 1.7e-06 57.4 81 37.0
BraA10t44870Z Brassica rapa HOM05D000095 ORTHO05D000330 1.7e-06 57.4 81 37.0
Glyma.08G290100 Glycine max HOM05D000095 ORTHO05D000330 1.7e-06 57.4 91 35.2
Glyma.18G134200 Glycine max HOM05D000095 ORTHO05D000330 1.7e-06 57.4 91 35.2
Oeu023795.1 Olea europaea HOM05D000095 ORTHO05D000330 1.7e-06 57.4 74 36.5
SHI03413 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-06 57.4 51 45.1
SHI12838 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-06 57.4 51 45.1
SHI40183 Sapria himalayana HOM05D000002 ORTHO05D000001 1.7e-06 57.4 51 45.1
HPP92_022659 Vanilla planifolia HOM05D000095 ORTHO05D000330 1.7e-06 57.4 86 34.9
Cpa.g.sc138.5 Carica papaya HOM05D000095 ORTHO05D000330 2.2e-06 57.0 73 37.0
ECA246G3457 Erigeron canadensis HOM05D000002 ORTHO05D000001 2.2e-06 57.0 50 52.0
Nitab4.5_0010431g0030 Nicotiana tabacum HOM05D000095 ORTHO05D016174 2.2e-06 57.0 69 42.0
SHI14696 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-06 57.0 51 45.1
SHI16531 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-06 57.0 53 43.4
SHI21039 Sapria himalayana HOM05D000002 ORTHO05D000001 2.2e-06 57.0 51 45.1
A03p03880 Brassica napus HOM05D000001 ORTHO05D000003 2.9e-06 56.6 87 39.1
CAN.G439.36 Capsicum annuum HOM05D000095 ORTHO05D016174 2.9e-06 56.6 66 43.9
Lj2g0013619 Lotus japonicus HOM05D000095 ORTHO05D000330 2.9e-06 56.6 91 36.3
Peaxi162Scf00217g00912 Petunia axillaris HOM05D000095 ORTHO05D016174 2.9e-06 56.6 68 39.7
SHI04975 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-06 56.6 51 45.1
SHI06248 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-06 56.6 51 45.1
SHI14592 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-06 56.6 51 45.1
SHI18526 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-06 56.6 55 41.8
SHI27506 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-06 56.6 51 45.1
SHI32397 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-06 56.6 51 45.1
SHI48091 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-06 56.6 51 45.1
SHI49777 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-06 56.6 51 45.1
SHI54566 Sapria himalayana HOM05D000002 ORTHO05D000001 2.9e-06 56.6 51 45.1
CSS0011082 Camellia sinensis var. sinensis HOM05D000095 ORTHO05D000330 3.7e-06 56.2 75 42.7
CSS0017252 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.7e-06 56.2 51 49.0
CSS0041989 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.7e-06 56.2 51 49.0
ECA238G1872 Erigeron canadensis HOM05D000002 ORTHO05D000001 3.7e-06 56.2 45 55.6
SHI01542 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-06 56.2 51 43.1
SHI06057 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-06 56.2 51 45.1
SHI08046 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-06 56.2 51 45.1
SHI11142 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-06 56.2 51 45.1
SHI19184 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-06 56.2 51 45.1
SHI20567 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-06 56.2 51 45.1
SHI51313 Sapria himalayana HOM05D000002 ORTHO05D000001 3.7e-06 56.2 51 47.1
TAR371G0274 Trochodendron aralioides HOM05D000095 ORTHO05D000330 3.7e-06 56.2 91 37.4
HPP92_002423 Vanilla planifolia HOM05D000095 ORTHO05D000330 3.7e-06 56.2 90 33.3
Ah.13g077590 Amaranthus hybridus HOM05D000002 ORTHO05D000001 4.9e-06 55.8 51 49.0
CARHR189900 Cardamine hirsuta HOM05D000095 ORTHO05D012779 4.9e-06 55.8 89 38.2
Lalb_Chr17g0338351 Lupinus albus HOM05D000095 ORTHO05D000330 4.9e-06 55.8 88 34.1
Nitab4.5_0010633g0050 Nicotiana tabacum HOM05D000095 ORTHO05D000330 4.9e-06 55.8 65 40.0
Oeu045744.1 Olea europaea HOM05D000095 ORTHO05D012712 4.9e-06 55.8 81 34.6
SHI16942 Sapria himalayana HOM05D000002 ORTHO05D000001 4.9e-06 55.8 51 45.1
SHI42023 Sapria himalayana HOM05D000002 ORTHO05D000001 4.9e-06 55.8 51 43.1
Aqoxy3G04308 Aquilegia oxysepala HOM05D000095 ORTHO05D000330 6.4e-06 55.5 93 35.5
ECA234G1536 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.4e-06 55.5 50 50.0
ECA234G4334 Erigeron canadensis HOM05D000335 ORTHO05D000001 6.4e-06 55.5 45 55.6
ECA238G2688 Erigeron canadensis HOM05D000002 ORTHO05D000001 6.4e-06 55.5 45 53.3
Oeu026897.1 Olea europaea HOM05D000095 ORTHO05D000330 6.4e-06 55.5 62 41.9
SHI02093 Sapria himalayana HOM05D000002 ORTHO05D000001 6.4e-06 55.5 54 46.3
SHI07321 Sapria himalayana HOM05D000002 ORTHO05D000001 6.4e-06 55.5 51 43.1
SHI15245 Sapria himalayana HOM05D000002 ORTHO05D000001 6.4e-06 55.5 51 45.1
SHI27448 Sapria himalayana HOM05D000002 ORTHO05D000001 6.4e-06 55.5 55 41.8
SHI40163 Sapria himalayana HOM05D000002 ORTHO05D000001 6.4e-06 55.5 53 39.6
SHI45090 Sapria himalayana HOM05D000002 ORTHO05D000001 6.4e-06 55.5 51 43.1
SHI48957 Sapria himalayana HOM05D000002 ORTHO05D000001 6.4e-06 55.5 51 45.1
VMungo0251G3667 Vigna mungo HOM05D000095 ORTHO05D000330 6.4e-06 55.5 91 37.4
C03p04390 Brassica napus HOM05D000001 ORTHO05D000003 8.4e-06 55.1 88 38.6
BolC3t12970H Brassica oleracea HOM05D000001 ORTHO05D000003 8.4e-06 55.1 88 38.6
CSS0020823 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.4e-06 55.1 51 47.1
Lsat_1_v5_gn_3_34521 Lactuca sativa HOM05D000095 ORTHO05D000330 8.4e-06 55.1 86 37.2
Potri.007G064600 Populus trichocarpa HOM05D000095 ORTHO05D000330 8.4e-06 55.1 75 38.7
SHI33784 Sapria himalayana HOM05D000002 ORTHO05D000001 8.4e-06 55.1 51 43.1
Sed0020350 Sechium edule HOM05D000095 ORTHO05D000330 8.4e-06 55.1 62 40.3
TWI74G1277 Tripterygium wilfordii HOM05D000095 ORTHO05D000330 8.4e-06 55.1 88 35.2


User provided reference genes

Program Settings