Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G637.32 Capsicum annuum HOM05D008697 ORTHO05D010866 5.1e-301 1036.9 517 100.0
Peaxi162Scf00171g00817 Petunia axillaris HOM05D008697 ORTHO05D010866 9.4e-114 414.8 414 56.3
Nitab4.5_0004454g0050 Nicotiana tabacum HOM05D008697 ORTHO05D010866 1.2e-95 354.8 300 60.7
Nitab4.5_0000430g0080 Nicotiana tabacum HOM05D008697 ORTHO05D010866 1.5e-71 274.6 412 41.0
Nitab4.5_0005200g0080 Nicotiana tabacum HOM05D008697 ORTHO05D010866 1.9e-69 267.7 407 42.3
Nitab4.5_0003309g0040 Nicotiana tabacum HOM05D008697 ORTHO05D010866 4.1e-69 266.5 413 39.5
Peaxi162Scf00171g00931 Petunia axillaris HOM05D008697 ORTHO05D010866 1.1e-64 251.9 325 45.5
Peaxi162Scf00171g00721 Petunia axillaris HOM05D008697 ORTHO05D010866 4.9e-62 243.0 409 42.1
Peaxi162Scf00171g00630 Petunia axillaris HOM05D008697 ORTHO05D010866 1.4e-56 224.9 419 36.8
Peaxi162Scf00251g00041 Petunia axillaris HOM05D008697 ORTHO05D010866 2.4e-56 224.2 413 37.5
Peaxi162Scf00001g00056 Petunia axillaris HOM05D008697 ORTHO05D010866 9.0e-56 222.2 413 37.3
CAN.G1909.14 Capsicum annuum HOM05D008697 ORTHO05D010866 1.4e-53 214.9 413 38.0
CAN.G1631.3 Capsicum annuum HOM05D008697 ORTHO05D010866 1.1e-50 205.3 420 36.0
Nitab4.5_0000936g0060 Nicotiana tabacum HOM05D004257 ORTHO05D005202 5.6e-50 203.0 172 66.3
CAN.G1631.2 Capsicum annuum HOM05D008697 ORTHO05D010866 2.4e-48 197.6 418 36.6
CAN.G637.31 Capsicum annuum HOM05D008697 ORTHO05D010866 2.0e-47 194.5 412 32.8
CAN.G1631.9 Capsicum annuum HOM05D008697 ORTHO05D010866 7.1e-45 186.0 409 33.3
PGSC0003DMG400015218 Solanum tuberosum HOM05D008697 ORTHO05D010923 1.2e-44 185.3 414 35.3
PGSC0003DMG400017884 Solanum tuberosum HOM05D008697 ORTHO05D010866 2.1e-44 184.5 414 33.3
PGSC0003DMG400015217 Solanum tuberosum HOM05D008697 ORTHO05D010866 4.6e-44 183.3 408 33.6
PGSC0003DMG400025633 Solanum tuberosum HOM05D008697 ORTHO05D010866 1.8e-43 181.4 372 37.9
Sopen03g029630 Solanum pennellii HOM05D008697 ORTHO05D010923 1.9e-42 177.9 413 34.4
PGSC0003DMG400015282 Solanum tuberosum HOM05D008697 ORTHO05D010866 1.9e-42 177.9 380 35.0
Sopen03g029650 Solanum pennellii HOM05D008697 ORTHO05D010866 1.5e-39 168.3 386 33.9
PGSC0003DMG400025634 Solanum tuberosum HOM05D008697 ORTHO05D010866 2.6e-39 167.5 413 33.4
PGSC0003DMG400025631 Solanum tuberosum HOM05D008697 ORTHO05D010866 1.1e-34 152.1 296 37.8
Nitab4.5_0001180g0260 Nicotiana tabacum HOM05D008697 ORTHO05D010866 2.5e-34 151.0 197 46.2
Nitab4.5_0003309g0020 Nicotiana tabacum HOM05D008697 ORTHO05D010866 1.6e-28 131.7 198 41.4
Sopen03g029100 Solanum pennellii HOM05D008697 ORTHO05D010866 1.8e-27 128.3 269 35.3
Nitab4.5_0000430g0090 Nicotiana tabacum HOM05D008697 ORTHO05D010866 1.5e-26 125.2 181 43.1
CAN.G1631.1 Capsicum annuum HOM05D000021 ORTHO05D000010 6.3e-25 119.8 213 36.2
Oeu004534.1 Olea europaea HOM05D008697 ORTHO05D010866 6.3e-25 119.8 394 29.7
Nitab4.5_0004148g0080 Nicotiana tabacum HOM05D008697 ORTHO05D010866 9.0e-24 115.9 304 31.6
Nitab4.5_0000936g0070 Nicotiana tabacum HOM05D008697 ORTHO05D010866 7.7e-23 112.8 159 47.2
Nitab4.5_0003309g0030 Nicotiana tabacum HOM05D008697 ORTHO05D010866 2.2e-22 111.3 221 40.3
Nitab4.5_0000430g0160 Nicotiana tabacum HOM05D008697 ORTHO05D010866 3.8e-22 110.5 132 46.2
Peaxi162Scf00115g00112 Petunia axillaris HOM05D008697 ORTHO05D010866 3.8e-22 110.5 295 31.2
Nitab4.5_0005200g0090 Nicotiana tabacum HOM05D008697 ORTHO05D010866 4.6e-20 103.6 166 41.6
Sopen09g026680 Solanum pennellii HOM05D008697 ORTHO05D010866 1.3e-17 95.5 201 36.8
QL02p015450 Quercus lobata HOM05D007494 ORTHO05D009621 3.7e-17 94.0 442 25.1
Actinidia11171 Actinidia chinensis HOM05D008697 ORTHO05D010866 8.2e-17 92.8 395 25.6
Oeu008441.1 Olea europaea HOM05D008697 ORTHO05D010866 2.4e-16 91.3 209 30.1
Migut.N02976 Erythranthe guttata HOM05D008697 ORTHO05D010866 1.4e-13 82.0 325 25.2
Sopen09g026700 Solanum pennellii HOM05D008697 ORTHO05D010866 2.1e-12 78.2 191 35.6
QL03p004281 Quercus lobata HOM05D008697 ORTHO05D010866 2.7e-12 77.8 319 26.0
Peaxi162Scf48310g00001 Petunia axillaris HOM05D008697 ORTHO05D010866 5.7e-10 70.1 88 44.3
Potri.005G254500 Populus trichocarpa HOM05D000664 ORTHO05D010866 5.7e-10 70.1 406 24.9
Potri.005G254633 Populus trichocarpa HOM05D000664 ORTHO05D010866 1.7e-09 68.6 398 25.4
THA.LOC104813281 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 3.7e-09 67.4 377 22.3
Prupe.1G170100 Prunus persica HOM05D000007 ORTHO05D000521 1.1e-08 65.9 368 25.0
AL5G30530 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 1.4e-08 65.5 307 22.1
Duzib041G0294 Durio zibethinus HOM05D007494 ORTHO05D009621 4.1e-08 63.9 305 24.3
PSO541G6060 Papaver somniferum HOM05D000007 ORTHO05D000676 7.0e-08 63.2 229 23.1
RcHm_v2.0_Chr4g0412861 Rosa chinensis HOM05D000007 ORTHO05D000521 9.1e-08 62.8 309 23.9
Atru.chr6.3331 Acer truncatum HOM05D000007 ORTHO05D000521 1.2e-07 62.4 333 23.4
PSO081G0128 Papaver somniferum HOM05D000007 ORTHO05D000676 5.9e-07 60.1 250 24.0
RcHm_v2.0_Chr4g0398061 Rosa chinensis HOM05D000664 ORTHO05D000491 1.0e-06 59.3 241 26.1
PGSC0003DMG400013272 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.0e-06 59.3 169 28.4
ClCG06G012330 Citrullus lanatus HOM05D000759 ORTHO05D000574 1.3e-06 58.9 307 22.5
Cc06_g22260 Coffea canephora HOM05D000007 ORTHO05D000521 1.3e-06 58.9 234 26.1
Medtr3g024110 Medicago truncatula HOM05D000007 ORTHO05D000017 1.3e-06 58.9 223 25.1
PSO339G4005 Papaver somniferum HOM05D000007 ORTHO05D000676 2.2e-06 58.2 283 22.3
Nitab4.5_0013676g0010 Nicotiana tabacum HOM05D000664 ORTHO05D000491 3.8e-06 57.4 145 29.0
PSO339G5184 Papaver somniferum HOM05D000007 ORTHO05D000676 3.8e-06 57.4 240 24.6
Manes.07G065200 Manihot esculenta HOM05D000007 ORTHO05D000017 5.0e-06 57.0 225 26.2
PSO732G0636 Papaver somniferum HOM05D000007 ORTHO05D000676 5.0e-06 57.0 239 24.7
Sopen04g027220 Solanum pennellii HOM05D000173 ORTHO05D000316 8.5e-06 56.2 246 23.2


User provided reference genes

Program Settings