Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G637.31 Capsicum annuum HOM05D008697 ORTHO05D010866 1.7e-229 798.9 386 100.0
Nitab4.5_0000430g0080 Nicotiana tabacum HOM05D008697 ORTHO05D010866 1.8e-85 320.5 401 47.9
Nitab4.5_0003309g0040 Nicotiana tabacum HOM05D008697 ORTHO05D010866 7.8e-81 305.1 398 45.2
Nitab4.5_0005200g0080 Nicotiana tabacum HOM05D008697 ORTHO05D010866 1.8e-77 293.9 387 45.2
Peaxi162Scf00171g00721 Petunia axillaris HOM05D008697 ORTHO05D010866 3.2e-74 283.1 394 45.2
PGSC0003DMG400015217 Solanum tuberosum HOM05D008697 ORTHO05D010866 1.9e-66 257.3 391 41.4
Peaxi162Scf00001g00056 Petunia axillaris HOM05D008697 ORTHO05D010866 2.4e-66 256.9 390 41.3
Peaxi162Scf00171g00630 Petunia axillaris HOM05D008697 ORTHO05D010866 1.2e-65 254.6 411 41.1
Peaxi162Scf00251g00041 Petunia axillaris HOM05D008697 ORTHO05D010866 4.6e-65 252.7 391 40.7
CAN.G1631.9 Capsicum annuum HOM05D008697 ORTHO05D010866 3.7e-62 243.0 393 39.4
CAN.G1631.3 Capsicum annuum HOM05D008697 ORTHO05D010866 2.0e-60 237.3 389 40.9
PGSC0003DMG400015218 Solanum tuberosum HOM05D008697 ORTHO05D010923 3.4e-60 236.5 398 39.2
Sopen03g029630 Solanum pennellii HOM05D008697 ORTHO05D010923 1.1e-58 231.5 398 37.9
CAN.G1631.2 Capsicum annuum HOM05D008697 ORTHO05D010866 2.1e-57 227.3 393 39.2
CAN.G1909.14 Capsicum annuum HOM05D008697 ORTHO05D010866 2.3e-56 223.8 392 41.3
PGSC0003DMG400025633 Solanum tuberosum HOM05D008697 ORTHO05D010866 3.7e-54 216.5 348 42.0
PGSC0003DMG400015282 Solanum tuberosum HOM05D008697 ORTHO05D010866 1.2e-52 211.5 390 39.0
Sopen03g029650 Solanum pennellii HOM05D008697 ORTHO05D010866 2.0e-52 210.7 378 38.4
Peaxi162Scf00171g00817 Petunia axillaris HOM05D008697 ORTHO05D010866 1.3e-51 208.0 403 37.0
PGSC0003DMG400017884 Solanum tuberosum HOM05D008697 ORTHO05D010866 8.5e-51 205.3 396 36.9
PGSC0003DMG400025634 Solanum tuberosum HOM05D008697 ORTHO05D010866 2.7e-49 200.3 385 37.1
CAN.G637.32 Capsicum annuum HOM05D008697 ORTHO05D010866 5.7e-47 192.6 412 32.8
PGSC0003DMG400025631 Solanum tuberosum HOM05D008697 ORTHO05D010866 1.7e-46 191.0 292 42.5
Nitab4.5_0003309g0020 Nicotiana tabacum HOM05D008697 ORTHO05D010866 2.0e-44 184.1 195 51.8
Nitab4.5_0001180g0260 Nicotiana tabacum HOM05D008697 ORTHO05D010866 2.0e-36 157.5 190 45.8
Nitab4.5_0004454g0050 Nicotiana tabacum HOM05D008697 ORTHO05D010866 3.2e-34 150.2 283 34.3
Peaxi162Scf00115g00112 Petunia axillaris HOM05D008697 ORTHO05D010866 5.7e-31 139.4 266 36.5
Sopen03g029100 Solanum pennellii HOM05D008697 ORTHO05D010866 4.8e-30 136.3 250 36.4
Nitab4.5_0004148g0080 Nicotiana tabacum HOM05D008697 ORTHO05D010866 9.1e-29 132.1 293 35.8
Peaxi162Scf00171g00931 Petunia axillaris HOM05D008697 ORTHO05D010866 2.2e-27 127.5 305 28.9
Nitab4.5_0005200g0090 Nicotiana tabacum HOM05D008697 ORTHO05D010866 5.0e-27 126.3 140 49.3
Sopen09g026680 Solanum pennellii HOM05D008697 ORTHO05D010866 5.5e-26 122.9 200 40.0
Actinidia11171 Actinidia chinensis HOM05D008697 ORTHO05D010866 1.5e-23 114.8 368 29.3
Nitab4.5_0000430g0090 Nicotiana tabacum HOM05D008697 ORTHO05D010866 1.5e-23 114.8 167 43.7
Nitab4.5_0003309g0030 Nicotiana tabacum HOM05D008697 ORTHO05D010866 2.6e-23 114.0 209 41.6
CAN.G1631.1 Capsicum annuum HOM05D000021 ORTHO05D000010 3.3e-23 113.6 187 42.8
Sopen09g026700 Solanum pennellii HOM05D008697 ORTHO05D010866 1.8e-21 107.8 190 38.9
Nitab4.5_0000936g0060 Nicotiana tabacum HOM05D004257 ORTHO05D005202 4.5e-20 103.2 169 35.5
QL02p015450 Quercus lobata HOM05D007494 ORTHO05D009621 1.1e-18 98.6 384 27.3
Oeu004534.1 Olea europaea HOM05D008697 ORTHO05D010866 3.2e-18 97.1 361 24.9
Migut.N02976 Erythranthe guttata HOM05D008697 ORTHO05D010866 7.5e-15 85.9 304 28.0
QL03p004281 Quercus lobata HOM05D008697 ORTHO05D010866 1.1e-13 82.0 299 25.8
Peaxi162Scf48310g00001 Petunia axillaris HOM05D008697 ORTHO05D010866 1.8e-13 81.3 94 46.8
Ciclev10006867m.g Citrus clementina HOM05D000664 ORTHO05D000491 8.6e-11 72.4 353 25.8
Rhsim01G0016900 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.5e-10 71.6 281 26.3
THA.LOC104813281 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 3.3e-10 70.5 295 25.1
Duzib041G0294 Durio zibethinus HOM05D007494 ORTHO05D009621 9.5e-10 68.9 382 24.3
THA.LOC104813248 Tarenaya hassleriana HOM05D007494 ORTHO05D009621 1.2e-09 68.6 255 27.1
Rhsim01G0018000 Rhododendron simsii HOM05D000664 ORTHO05D000491 1.6e-09 68.2 332 25.0
HanXRQChr07g0189351 Helianthus annuus HOM05D000171 ORTHO05D009073 4.7e-09 66.6 256 25.4
Lj2g0027921 Lotus japonicus HOM05D000007 ORTHO05D000017 4.7e-09 66.6 293 24.2
ClCG06G012330 Citrullus lanatus HOM05D000759 ORTHO05D000574 8.0e-09 65.9 307 22.5
Nn8g41009 Nelumbo nucifera HOM05D000664 ORTHO05D000491 8.0e-09 65.9 246 26.8
Aa31LG3G18820 Aethionema arabicum HOM05D000664 ORTHO05D000491 1.4e-08 65.1 300 25.3
Ah.01g003730 Amaranthus hybridus HOM05D000007 ORTHO05D000039 1.8e-08 64.7 350 21.4
PSO782G3541 Papaver somniferum HOM05D000007 ORTHO05D000017 1.8e-08 64.7 324 26.2
Thhalv10009430m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 2.3e-08 64.3 278 24.8
Aqoxy3G01316 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 4.0e-08 63.5 320 23.8
Potri.007G037500 Populus trichocarpa HOM05D003814 ORTHO05D004399 5.2e-08 63.2 292 22.9
TAR625G1137 Trochodendron aralioides HOM05D001729 ORTHO05D001155 1.5e-07 61.6 314 24.8
AL1G67140 Arabidopsis lyrata HOM05D007494 ORTHO05D009621 2.0e-07 61.2 288 22.9
Ciclev10005090m.g Citrus clementina HOM05D000664 ORTHO05D000491 3.4e-07 60.5 290 25.2
Thecc.04G270100 Theobroma cacao HOM05D000007 ORTHO05D000017 3.4e-07 60.5 233 25.8
Hma1.2p1_0726F.1_g208920 Hydrangea macrophylla HOM05D000664 ORTHO05D000491 4.4e-07 60.1 289 24.9
Medtr5g046290 Medicago truncatula HOM05D000007 ORTHO05D000017 4.4e-07 60.1 358 25.4
Medtr5g046300 Medicago truncatula HOM05D000007 ORTHO05D000017 4.4e-07 60.1 358 25.4
Glyma.07G187200 Glycine max HOM05D000007 ORTHO05D000017 7.5e-07 59.3 241 22.8
QL11p009377 Quercus lobata HOM05D000007 ORTHO05D000017 7.5e-07 59.3 322 24.2
Ciclev10005086m.g Citrus clementina HOM05D000664 ORTHO05D000491 9.8e-07 58.9 251 25.1
TAR626G1797 Trochodendron aralioides HOM05D000664 ORTHO05D000491 9.8e-07 58.9 295 23.7
MD13G1148700 Malus domestica HOM05D007162 ORTHO05D007631 1.3e-06 58.5 303 22.1
Thhalv10015953m.g Eutrema salsugineum HOM05D007494 ORTHO05D009621 1.7e-06 58.2 173 28.3
SGA_v2.0_scaffold1G00761 Striga asiatica HOM05D001729 ORTHO05D001155 1.7e-06 58.2 331 22.4
TAR626G1239 Trochodendron aralioides HOM05D000664 ORTHO05D000491 1.7e-06 58.2 323 22.0
Aa31LG8G15360 Aethionema arabicum HOM05D007494 ORTHO05D009621 2.8e-06 57.4 246 26.8
Aqoxy4G01072 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 2.8e-06 57.4 173 26.0
Nitab4.5_0003546g0050 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.8e-06 57.4 275 23.6
Aqoxy2G00864 Aquilegia oxysepala HOM05D000007 ORTHO05D000017 3.7e-06 57.0 279 24.7
Aqoxy2G02259 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 3.7e-06 57.0 174 27.0
Aqoxy59s001 Aquilegia oxysepala HOM05D002420 ORTHO05D002422 3.7e-06 57.0 174 27.0
PSO339G2134 Papaver somniferum HOM05D000007 ORTHO05D000017 3.7e-06 57.0 328 22.9
Psat0s430g0080 Pisum sativum HOM05D000007 ORTHO05D000017 3.7e-06 57.0 248 23.4
Thecc.08G063600 Theobroma cacao HOM05D007494 ORTHO05D009621 3.7e-06 57.0 133 28.6
TAR371G0430 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.7e-06 57.0 310 26.5
MELO3C005495.2 Cucumis melo HOM05D000664 ORTHO05D000491 6.3e-06 56.2 293 23.2
FvH4_6g14790 Fragaria vesca HOM05D000007 ORTHO05D000017 6.3e-06 56.2 303 23.8
Lj2g0023053 Lotus japonicus HOM05D000007 ORTHO05D000017 6.3e-06 56.2 234 25.6
Nitab4.5_0002794g0030 Nicotiana tabacum HOM05D000007 ORTHO05D000017 6.3e-06 56.2 230 25.2


User provided reference genes

Program Settings