Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G636.4 Capsicum annuum HOM05D005510 ORTHO05D006750 1.6e-100 369.4 188 100.0
PGSC0003DMG400008133 Solanum tuberosum HOM05D005510 ORTHO05D006750 1.2e-47 193.7 235 52.8
Sopen10g030080 Solanum pennellii HOM05D005510 ORTHO05D006750 3.6e-47 192.2 235 52.3
Solyc10g079440.2 Solanum lycopersicum HOM05D005510 ORTHO05D006750 1.8e-46 189.9 235 51.5
Nitab4.5_0000646g0280 Nicotiana tabacum HOM05D005510 ORTHO05D006750 5.2e-46 188.3 253 47.8
Nitab4.5_0002805g0080 Nicotiana tabacum HOM05D005510 ORTHO05D006750 8.3e-44 181.0 253 45.8
Peaxi162Scf00002g00419 Petunia axillaris HOM05D005510 ORTHO05D006750 8.6e-41 171.0 235 46.8
Rhsim13G0197800 Rhododendron simsii HOM05D005510 ORTHO05D006750 1.6e-34 150.2 235 40.9
Dinv14542 Davidia involucrata HOM05D005510 ORTHO05D006750 1.9e-32 143.3 235 41.7
CAN.G641.38 Capsicum annuum HOM05D005510 ORTHO05D006750 1.6e-31 140.2 81 85.2
CSS0010239 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 8.1e-31 137.9 235 38.7
Cfa019896 Carpinus fangiana HOM05D005510 ORTHO05D006750 1.8e-30 136.7 235 39.6
Cc06_g18550 Coffea canephora HOM05D005510 ORTHO05D006750 1.8e-30 136.7 235 39.1
Duzib093G0795 Durio zibethinus HOM05D005510 ORTHO05D006750 5.2e-30 135.2 242 37.6
Oeu008195.1 Olea europaea HOM05D005510 ORTHO05D006750 1.2e-29 134.0 235 37.9
arahy.Tifrunner.gnm1.ann1.T4STFC Arachis hypogaea HOM05D005510 ORTHO05D006750 1.5e-29 133.7 199 40.7
Prupe.7G023400 Prunus persica HOM05D005510 ORTHO05D006750 5.8e-29 131.7 235 37.0
Atru.chr8.924 Acer truncatum HOM05D005510 ORTHO05D006750 9.9e-29 131.0 235 38.7
Actinidia38200 Actinidia chinensis HOM05D005510 ORTHO05D006750 9.9e-29 131.0 245 35.9
Haze_20353 Corylus avellana HOM05D005510 ORTHO05D006750 9.9e-29 131.0 250 37.2
Medtr6g026730 Medicago truncatula HOM05D005510 ORTHO05D006750 9.9e-29 131.0 235 37.9
PGSC0003DMG400012053 Solanum tuberosum HOM05D005510 ORTHO05D006750 9.9e-29 131.0 81 80.2
Gorai.002G222700 Gossypium raimondii HOM05D005510 ORTHO05D006750 1.3e-28 130.6 235 37.4
Manes.10G072300 Manihot esculenta HOM05D005510 ORTHO05D006750 1.7e-28 130.2 235 37.4
MD14G1100100 Malus domestica HOM05D005510 ORTHO05D006750 2.2e-28 129.8 235 38.7
Ciclev10011846m.g Citrus clementina HOM05D005510 ORTHO05D006750 2.9e-28 129.4 235 38.3
Gohir.D01G179900 Gossypium hirsutum HOM05D005510 ORTHO05D006750 2.9e-28 129.4 235 37.0
QL07p015480 Quercus lobata HOM05D005510 ORTHO05D006750 4.9e-28 128.6 235 37.4
DCAR_020612 Daucus carota HOM05D005510 ORTHO05D006750 6.4e-28 128.3 235 36.2
FAN26G2114 Fragaria x ananassa HOM05D005510 ORTHO05D006750 1.1e-27 127.5 235 37.4
FvH4_1g29380 Fragaria vesca HOM05D005510 ORTHO05D006750 1.4e-27 127.1 235 37.4
Lsat_1_v5_gn_5_40140 Lactuca sativa HOM05D005510 ORTHO05D006750 1.9e-27 126.7 235 36.2
Potri.006G026100 Populus trichocarpa HOM05D005510 ORTHO05D006750 2.4e-27 126.3 235 37.0
Psat1g087480 Pisum sativum HOM05D005510 ORTHO05D006750 3.2e-27 125.9 235 37.0
SalBow6G2337 Salvia bowleyana HOM05D005510 ORTHO05D006750 9.2e-27 124.4 235 36.2
SalBow6G2820 Salvia bowleyana HOM05D005510 ORTHO05D006750 9.2e-27 124.4 235 36.2
Ca_04447_v3 Cicer arietinum L. HOM05D002043 ORTHO05D002207 1.2e-26 124.0 235 36.2
Lj1C1070G2 Lonicera japonica HOM05D005510 ORTHO05D006750 1.2e-26 124.0 235 36.6
RcHm_v2.0_Chr3g0495031 Rosa chinensis HOM05D005510 ORTHO05D006750 1.2e-26 124.0 235 36.2
Thecc.05G124100 Theobroma cacao HOM05D005510 ORTHO05D006750 2.1e-26 123.2 235 36.6
Cpa.g.sc33.180 Carica papaya HOM05D005510 ORTHO05D006750 2.7e-26 122.9 235 37.4
PSO384G1661 Papaver somniferum HOM05D005510 ORTHO05D006750 3.5e-26 122.5 235 39.1
ClCG04G005050 Citrullus lanatus HOM05D005510 ORTHO05D006750 4.6e-26 122.1 213 38.0
Glyma.05G079900 Glycine max HOM05D005510 ORTHO05D006750 4.6e-26 122.1 235 35.7
Gohir.A01G189700 Gossypium hirsutum HOM05D005510 ORTHO05D006750 4.6e-26 122.1 235 36.2
CsaV3_4G029010 Cucumis sativus L. HOM05D005510 ORTHO05D006750 6.0e-26 121.7 235 37.9
Hma1.2p1_1327F.1_g275890 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 6.0e-26 121.7 235 37.0
Hma1.2p1_1327F.1_g275900 Hydrangea macrophylla HOM05D005510 ORTHO05D006750 6.0e-26 121.7 235 37.0
Sed0017548 Sechium edule HOM05D005510 ORTHO05D006750 6.0e-26 121.7 235 37.0
Hund24472 Selenicereus undatus HOM05D005510 ORTHO05D006750 1.3e-25 120.6 235 35.7
GSVIVG01025858001 Vitis vinifera HOM05D005510 ORTHO05D006750 1.3e-25 120.6 235 36.6
TWI74G1137 Tripterygium wilfordii HOM05D005510 ORTHO05D006750 3.0e-25 119.4 235 34.0
Phvul.004G053400 Phaseolus vulgaris HOM05D005510 ORTHO05D006750 6.6e-25 118.2 235 35.7
arahy.Tifrunner.gnm1.ann1.RHHN50 Arachis hypogaea HOM05D005510 ORTHO05D006750 8.6e-25 117.9 256 33.2
MBI13_g44207_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 8.6e-25 117.9 235 36.2
MELO3C019166.2 Cucumis melo HOM05D005510 ORTHO05D006750 1.1e-24 117.5 235 36.6
Nn7g37230 Nelumbo nucifera HOM05D005510 ORTHO05D006750 1.5e-24 117.1 235 36.6
COL.COLO4_37568 Corchorus olitorius HOM05D005510 ORTHO05D006750 2.5e-24 116.3 239 34.3
arahy.Tifrunner.gnm1.ann1.VC24PE Arachis hypogaea HOM05D005510 ORTHO05D006750 3.3e-24 115.9 256 33.6
Lj5g0015267 Lotus japonicus HOM05D005510 ORTHO05D006750 4.3e-24 115.5 235 34.9
Sc13g0000690 Simmondsia chinensis HOM05D005510 ORTHO05D006750 4.3e-24 115.5 244 35.7
Aqoxy3G03066 Aquilegia oxysepala HOM05D005510 ORTHO05D006750 5.6e-24 115.2 235 36.2
THA.LOC104803249 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 7.3e-24 114.8 237 35.0
CAN.G248.49 Capsicum annuum HOM05D005510 ORTHO05D006750 2.1e-23 113.2 70 78.6
Migut.J01685 Erythranthe guttata HOM05D005510 ORTHO05D006750 4.7e-23 112.1 237 35.9
HanXRQChr02g0047171 Helianthus annuus HOM05D005510 ORTHO05D006750 4.7e-23 112.1 235 33.2
AUR62020963 Chenopodium quinoa HOM05D005510 ORTHO05D006750 6.2e-23 111.7 235 34.9
CDE08G0225 Ceratophyllum demersum HOM05D005510 ORTHO05D006750 8.1e-23 111.3 235 35.7
Sabra06G0019200 Salix brachista HOM05D005510 ORTHO05D006750 1.8e-22 110.2 263 31.9
SGA_v2.0_scaffold69G23139 Striga asiatica HOM05D005510 ORTHO05D006750 1.8e-22 110.2 237 35.4
PSO339G1815 Papaver somniferum HOM05D005510 ORTHO05D006750 4.0e-22 109.0 236 37.3
CANSAT11G0391 Cannabis sativa HOM05D005510 ORTHO05D006750 9.0e-22 107.8 246 32.9
Lalb_Chr02g0157631 Lupinus albus HOM05D005510 ORTHO05D006750 9.0e-22 107.8 256 32.4
EL10Ac3g07380 Beta vulgaris HOM05D005510 ORTHO05D006750 1.5e-21 107.1 235 34.5
Os01g0809900 Oryza sativa ssp. japonica HOM05D005510 ORTHO05D006750 3.4e-21 105.9 246 33.3
TPR.G23234 Trifolium pratense HOM05D005510 ORTHO05D006750 5.8e-21 105.1 80 57.5
Eucgr.A02173 Eucalyptus grandis HOM05D005510 ORTHO05D006750 9.9e-21 104.4 245 34.3
HPP92_018208 Vanilla planifolia HOM05D005510 ORTHO05D006750 2.9e-20 102.8 235 33.2
CSS0041188 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 3.8e-20 102.4 91 52.7
PGR042G2248 Punica granatum HOM05D005510 ORTHO05D006750 3.8e-20 102.4 235 33.6
EL10Ac3g07382 Beta vulgaris HOM05D005510 ORTHO05D006750 4.9e-20 102.1 269 31.6
CSS0036939 Camellia sinensis var. sinensis HOM05D005510 ORTHO05D006750 4.9e-20 102.1 81 56.8
Carub.0005s2357 Capsella rubella HOM05D005510 ORTHO05D006750 7.1e-19 98.2 235 32.8
Aa31LG10G11690 Aethionema arabicum HOM05D005510 ORTHO05D006750 2.1e-18 96.7 235 31.1
AT3G56840 Arabidopsis thaliana HOM05D005510 ORTHO05D006750 2.7e-18 96.3 235 31.9
VMungo0464G0325 Vigna mungo HOM05D005510 ORTHO05D006750 2.7e-18 96.3 81 53.1
A09p49660 Brassica napus HOM05D005510 ORTHO05D006750 6.0e-18 95.1 236 34.3
BolC8t50825H Brassica oleracea HOM05D005510 ORTHO05D006750 6.0e-18 95.1 236 33.5
BraA09t40419Z Brassica rapa HOM05D005510 ORTHO05D006750 6.0e-18 95.1 236 34.3
ATR1096G068 Amborella trichopoda HOM05D005510 ORTHO05D006750 1.0e-17 94.4 235 33.2
C08p32070 Brassica napus HOM05D005510 ORTHO05D006750 1.7e-17 93.6 236 33.1
CiPaw.09G161300 Carya illinoinensis HOM05D005510 ORTHO05D006750 1.7e-17 93.6 90 51.1
AL5G38220 Arabidopsis lyrata HOM05D005510 ORTHO05D006750 5.1e-17 92.0 235 31.5
BcaC07g40115 Brassica carinata HOM05D005510 ORTHO05D006750 6.6e-17 91.7 236 32.6
THA.LOC104803303 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 6.6e-17 91.7 83 51.8
Sp5g05750 Schrenkiella parvula HOM05D005510 ORTHO05D006750 1.1e-16 90.9 235 31.5
Thhalv10005964m.g Eutrema salsugineum HOM05D005510 ORTHO05D006750 1.9e-16 90.1 253 30.0
AUR62018456 Chenopodium quinoa HOM05D005510 ORTHO05D006750 2.5e-16 89.7 80 51.2
MBI13_g43864_MAGBIO Magnolia biondii HOM05D005510 ORTHO05D006750 3.3e-16 89.4 84 51.2
unitig_749.g14152 Utricularia gibba HOM05D005510 ORTHO05D006750 9.6e-16 87.8 239 31.4
Zm00001eb150290 Zea mays HOM05D005510 ORTHO05D006750 1.3e-15 87.4 92 44.6
BcaC07g39994 Brassica carinata HOM05D005510 ORTHO05D006750 6.9e-14 81.6 222 32.4
TAR623G1399 Trochodendron aralioides HOM05D005510 ORTHO05D006750 5.8e-13 78.6 204 32.8
Mapoly0011s0121 Marchantia polymorpha HOM05D005510 ORTHO05D006750 7.6e-13 78.2 235 28.1
CAN.G641.39 Capsicum annuum HOM05D005510 ORTHO05D006750 9.9e-13 77.8 56 73.2
Pp3c12_4730 Physcomitrium patens HOM05D005510 ORTHO05D006750 9.9e-13 77.8 235 28.1
MSTRG.19825 Avicennia marina HOM05D005510 ORTHO05D006750 3.8e-12 75.9 53 67.9
arahy.Tifrunner.gnm1.ann1.MR8QPJ Arachis hypogaea HOM05D005510 ORTHO05D006750 6.4e-12 75.1 77 48.1
ECA246G1668 Erigeron canadensis HOM05D005510 ORTHO05D006750 8.4e-12 74.7 184 32.6
CARHR166990 Cardamine hirsuta HOM05D005510 ORTHO05D006750 1.6e-10 70.5 81 44.4
A09p49680 Brassica napus HOM05D005510 ORTHO05D006750 7.9e-10 68.2 82 46.3
BraA09t40424Z Brassica rapa HOM05D005510 ORTHO05D006750 7.9e-10 68.2 82 46.3
AagrBONN_evm.TU.Sc2ySwM_344.4799 Anthoceros agrestis HOM05D005510 ORTHO05D000746 1.3e-09 67.4 235 27.2
AUR62018455 Chenopodium quinoa HOM05D005510 ORTHO05D006750 2.3e-09 66.6 52 67.3
MD14G1091600 Malus domestica HOM05D005510 ORTHO05D006750 7.4e-08 61.6 53 60.4
SMO116G0325 Selaginella moellendorffii HOM05D005510 ORTHO05D006750 9.6e-08 61.2 257 26.8
TPR.G942 Trifolium pratense HOM05D005510 ORTHO05D006750 9.6e-08 61.2 52 59.6
Manes.07G109500 Manihot esculenta HOM05D005510 ORTHO05D006750 4.8e-07 58.9 52 59.6
SEGI_04748 Sequoiadendron giganteum HOM05D005510 ORTHO05D006750 6.2e-07 58.5 53 58.5
SalBow7G3561 Salvia bowleyana HOM05D005510 ORTHO05D006750 4.0e-06 55.8 37 73.0
Manes.05G099066 Manihot esculenta HOM05D005510 ORTHO05D006750 5.3e-06 55.5 52 59.6
THA.LOC104803301 Tarenaya hassleriana HOM05D005510 ORTHO05D006750 6.9e-06 55.1 42 59.5
Zm00001eb341880 Zea mays HOM05D005510 ORTHO05D006750 6.9e-06 55.1 53 43.4


User provided reference genes

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