Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G630.88 Capsicum annuum HOM05D004993 ORTHO05D008532 1.0e-193 679.9 340 100.0
Nitab4.5_0000582g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 1.2e-160 570.1 343 85.4
PGSC0003DMG402001731 Solanum tuberosum HOM05D004993 ORTHO05D008532 1.5e-136 490.0 346 76.0
Solyc03g111700.3 Solanum lycopersicum HOM05D004993 ORTHO05D008532 3.4e-136 488.8 351 74.9
Sopen03g030820 Solanum pennellii HOM05D004993 ORTHO05D008532 4.4e-136 488.4 349 75.1
Hma1.2p1_0862F.1_g229950 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 5.8e-136 488.0 344 70.9
MSTRG.7682 Avicennia marina HOM05D004993 ORTHO05D008532 6.0e-133 478.0 337 72.1
Lsat_1_v5_gn_4_20101 Lactuca sativa HOM05D004993 ORTHO05D008532 3.0e-132 475.7 339 71.7
Nitab4.5_0004719g0040 Nicotiana tabacum HOM05D004993 ORTHO05D008532 3.0e-132 475.7 341 75.1
Gohir.D12G173500 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.5e-131 473.4 340 71.2
Gorai.008G185400 Gossypium raimondii HOM05D004993 ORTHO05D008532 4.3e-131 471.9 336 71.4
Lj3A1018T65 Lonicera japonica HOM05D004993 ORTHO05D008532 4.3e-131 471.9 281 81.1
Gohir.D12G172900 Gossypium hirsutum HOM05D004993 ORTHO05D008532 9.5e-131 470.7 336 71.1
Gorai.008G186000 Gossypium raimondii HOM05D004993 ORTHO05D008532 1.2e-130 470.3 340 70.6
CSS0044433 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 2.1e-130 469.5 340 71.8
GSVIVG01011941001 Vitis vinifera HOM05D004993 ORTHO05D008532 2.1e-130 469.5 338 70.1
Gohir.A12G170200 Gossypium hirsutum HOM05D004993 ORTHO05D008532 1.1e-129 467.2 340 70.3
CiPaw.16G003600 Carya illinoinensis HOM05D004993 ORTHO05D008532 1.4e-129 466.8 333 70.9
Gohir.A12G169600 Gossypium hirsutum HOM05D004993 ORTHO05D008532 4.0e-129 465.3 336 70.5
Cfa018620 Carpinus fangiana HOM05D004993 ORTHO05D008532 8.9e-129 464.2 336 71.1
TAR371G0197 Trochodendron aralioides HOM05D004993 ORTHO05D008532 4.4e-128 461.8 337 69.7
Thecc.02G359900 Theobroma cacao HOM05D004993 ORTHO05D008532 9.8e-128 460.7 340 68.8
Prupe.1G306400 Prunus persica HOM05D004993 ORTHO05D008532 1.3e-127 460.3 329 71.1
Cc11_g10510 Coffea canephora HOM05D004993 ORTHO05D008532 8.3e-127 457.6 331 71.0
COL.COLO4_07879 Corchorus olitorius HOM05D004993 ORTHO05D008532 1.1e-126 457.2 340 68.8
MD16G1046900 Malus domestica HOM05D004993 ORTHO05D008532 1.4e-126 456.8 304 75.0
Manes.14G098500 Manihot esculenta HOM05D004993 ORTHO05D008532 2.4e-126 456.1 340 68.5
Peaxi162Scf00004g01611 Petunia axillaris HOM05D004993 ORTHO05D008532 2.4e-126 456.1 285 81.1
Duzib251G0893 Durio zibethinus HOM05D004993 ORTHO05D008532 9.2e-126 454.1 351 67.0
Phvul.003G028100 Phaseolus vulgaris HOM05D004993 ORTHO05D008532 4.6e-125 451.8 281 78.6
CANSAT64G2606 Cannabis sativa HOM05D004993 ORTHO05D008532 6.0e-125 451.4 313 73.5
HanXRQChr17g0567931 Helianthus annuus HOM05D004993 ORTHO05D008532 1.7e-124 449.9 343 66.8
SalBow8G3546 Salvia bowleyana HOM05D004993 ORTHO05D008532 1.7e-124 449.9 339 67.6
Dinv16501 Davidia involucrata HOM05D004993 ORTHO05D008532 2.3e-124 449.5 314 73.6
VMungo1215G2957 Vigna mungo HOM05D004993 ORTHO05D008532 5.1e-124 448.4 281 78.6
Potri.008G117600 Populus trichocarpa HOM05D004993 ORTHO05D008532 8.6e-124 447.6 325 70.8
Nn3g17764 Nelumbo nucifera HOM05D004993 ORTHO05D008532 1.9e-123 446.4 338 67.8
Lj2g0001269 Lotus japonicus HOM05D004993 ORTHO05D008532 2.5e-123 446.0 281 75.8
TWI31G0395 Tripterygium wilfordii HOM05D004993 ORTHO05D008532 3.3e-123 445.7 303 73.3
Sc04g0006640 Simmondsia chinensis HOM05D004993 ORTHO05D008532 4.3e-123 445.3 341 67.7
Lalb_Chr17g0341941 Lupinus albus HOM05D004993 ORTHO05D008532 5.6e-123 444.9 281 75.8
Glyma.02G098700 Glycine max HOM05D004993 ORTHO05D008532 2.1e-122 443.0 302 71.9
Haze_17449 Corylus avellana HOM05D004993 ORTHO05D008532 2.8e-122 442.6 390 61.8
Ciclev10031998m.g Citrus clementina HOM05D004993 ORTHO05D008532 6.2e-122 441.4 339 66.7
FvH4_4g27971 Fragaria vesca HOM05D004993 ORTHO05D008532 1.1e-121 440.7 281 77.2
QL01p044817 Quercus lobata HOM05D004993 ORTHO05D008532 4.0e-121 438.7 310 71.3
arahy.Tifrunner.gnm1.ann1.VJ59XU Arachis hypogaea HOM05D004993 ORTHO05D008532 8.9e-121 437.6 311 71.7
RhsimUnG0136600 Rhododendron simsii HOM05D004993 ORTHO05D008532 1.5e-120 436.8 339 65.5
CsaV3_5G034030 Cucumis sativus L. HOM05D004993 ORTHO05D008532 2.0e-120 436.4 338 68.6
SGA_v2.0_scaffold209G42027 Striga asiatica HOM05D004993 ORTHO05D008532 2.0e-120 436.4 366 64.2
FAN07G2608 Fragaria x ananassa HOM05D004993 ORTHO05D008532 2.6e-120 436.0 281 76.2
arahy.Tifrunner.gnm1.ann1.5ZE4QE Arachis hypogaea HOM05D004993 ORTHO05D008532 3.4e-120 435.6 298 73.2
Migut.O00833 Erythranthe guttata HOM05D004993 ORTHO05D008532 3.4e-120 435.6 286 74.5
FAN17G0685 Fragaria x ananassa HOM05D004993 ORTHO05D008532 1.3e-119 433.7 281 76.5
PSO063G3032 Papaver somniferum HOM05D004993 ORTHO05D008532 1.7e-119 433.3 281 75.1
THA.LOC104808209 Tarenaya hassleriana HOM05D004993 ORTHO05D008532 2.2e-119 433.0 294 71.4
RcHm_v2.0_Chr4g0435691 Rosa chinensis HOM05D004993 ORTHO05D008532 2.9e-119 432.6 281 76.2
CSS0008970 Camellia sinensis var. sinensis HOM05D004993 ORTHO05D008532 4.9e-119 431.8 346 66.5
MBI16_g25106_MAGBIO Magnolia biondii HOM05D004993 ORTHO05D008532 4.9e-119 431.8 283 73.1
PGR102G1294 Punica granatum HOM05D004993 ORTHO05D008532 4.9e-119 431.8 326 68.4
EL10Ac6g14467 Beta vulgaris HOM05D004993 ORTHO05D008532 6.4e-119 431.4 353 64.3
MELO3C012219.2 Cucumis melo HOM05D004993 ORTHO05D008532 1.1e-118 430.6 337 67.4
unitig_8.g3446 Utricularia gibba HOM05D004993 ORTHO05D008532 2.4e-118 429.5 288 74.0
TPR.G38312 Trifolium pratense HOM05D004993 ORTHO05D008532 1.2e-117 427.2 289 73.4
vmacro01368 Vaccinium macrocarpon HOM05D004993 ORTHO05D008532 7.8e-117 424.5 387 59.7
Atru.chr11.1340 Acer truncatum HOM05D004993 ORTHO05D008532 1.0e-116 424.1 273 76.9
AUR62002913 Chenopodium quinoa HOM05D004993 ORTHO05D008532 1.0e-116 424.1 345 63.8
Aqoxy3G03926 Aquilegia oxysepala HOM05D004993 ORTHO05D008532 1.3e-116 423.7 280 73.2
Aa31LG6G5980 Aethionema arabicum HOM05D004993 ORTHO05D008532 1.1e-115 420.6 280 72.5
Sp1g25580 Schrenkiella parvula HOM05D004993 ORTHO05D008532 1.1e-115 420.6 336 63.4
ECA234G2629 Erigeron canadensis HOM05D004993 ORTHO05D008532 3.3e-115 419.1 283 72.8
AUR62035273 Chenopodium quinoa HOM05D004993 ORTHO05D008532 5.6e-115 418.3 282 72.7
A08p24930 Brassica napus HOM05D004993 ORTHO05D008532 2.8e-114 416.0 337 63.2
AT1G29700 Arabidopsis thaliana HOM05D004993 ORTHO05D008532 4.7e-114 415.2 338 63.3
AL1G43530 Arabidopsis lyrata HOM05D004993 ORTHO05D008532 8.1e-114 414.5 336 63.1
BcaB03g12171 Brassica carinata HOM05D004993 ORTHO05D008532 3.1e-113 412.5 295 69.2
BraA08t34448Z Brassica rapa HOM05D004993 ORTHO05D008532 4.0e-113 412.1 337 62.9
C03p76040 Brassica napus HOM05D004993 ORTHO05D008532 8.9e-113 411.0 298 68.8
BolC3t19860H Brassica oleracea HOM05D004993 ORTHO05D008532 1.5e-112 410.2 298 68.5
CARHR029050 Cardamine hirsuta HOM05D004993 ORTHO05D008532 3.4e-112 409.1 338 61.5
Carub.0001s2791 Capsella rubella HOM05D004993 ORTHO05D008532 7.6e-112 407.9 292 67.8
Sabra08G0089200 Salix brachista HOM05D004993 ORTHO05D008532 7.6e-112 407.9 334 64.4
Sed0024124 Sechium edule HOM05D004993 ORTHO05D008532 7.6e-112 407.9 316 67.4
BcaC01g00125 Brassica carinata HOM05D004993 ORTHO05D008532 1.3e-111 407.1 298 68.1
Eucgr.B03043 Eucalyptus grandis HOM05D004993 ORTHO05D008532 6.4e-111 404.8 315 65.7
Medtr5g054360 Medicago truncatula HOM05D004993 ORTHO05D008532 1.0e-108 397.5 268 73.9
Hund05759 Selenicereus undatus HOM05D000924 ORTHO05D001209 4.8e-106 388.7 459 49.7
CDE04G2310 Ceratophyllum demersum HOM05D004993 ORTHO05D008532 6.2e-106 388.3 297 66.7
ATR0681G095 Amborella trichopoda HOM05D004993 ORTHO05D008532 1.2e-104 384.0 351 58.7
PSO782G1223 Papaver somniferum HOM05D004993 ORTHO05D008532 3.8e-103 379.0 326 61.7
HPP92_005309 Vanilla planifolia HOM05D004993 ORTHO05D008532 3.8e-103 379.0 264 67.8
Thhalv10009499m.g Eutrema salsugineum HOM05D004993 ORTHO05D008532 2.2e-95 353.2 308 59.7
Mapoly0053s0088 Marchantia polymorpha HOM05D004993 ORTHO05D008532 1.0e-92 344.4 269 59.9
SMO361G0287 Selaginella moellendorffii HOM05D004993 ORTHO05D008532 2.3e-92 343.2 313 54.0
Ah.02g127080 Amaranthus hybridus HOM05D004993 ORTHO05D008532 1.8e-89 333.6 227 74.0
CiPaw.15G004200 Carya illinoinensis HOM05D004993 ORTHO05D008532 4.0e-89 332.4 318 57.9
MD13G1045600 Malus domestica HOM05D004993 ORTHO05D008532 1.4e-86 323.9 321 57.0
Pp3c15_25860 Physcomitrium patens HOM05D004993 ORTHO05D008532 1.1e-83 314.3 271 55.0
Os12g0641300 Oryza sativa ssp. japonica HOM05D004993 ORTHO05D008532 2.1e-82 310.1 275 57.8
AagrBONN_evm.TU.Sc2ySwM_344.778 Anthoceros agrestis HOM05D004993 ORTHO05D008532 5.3e-81 305.4 238 60.5
Zm00001eb133920 Zea mays HOM05D004993 ORTHO05D008532 3.5e-77 292.7 282 55.7
Migut.L01091 Erythranthe guttata HOM05D004993 ORTHO05D008532 1.0e-71 274.6 160 79.4
Psat2g091800 Pisum sativum HOM05D004993 ORTHO05D008532 3.9e-68 262.7 174 72.4
Actinidia38387 Actinidia chinensis HOM05D004993 ORTHO05D008532 4.5e-64 249.2 149 80.5
Hma1.2p1_0862F.1_g229960 Hydrangea macrophylla HOM05D004993 ORTHO05D008532 4.4e-59 232.6 165 72.1
CBR_g46806 Chara braunii HOM05D004993 ORTHO05D008532 5.9e-56 222.2 340 38.8
Ca_20419_v3 Cicer arietinum L. HOM05D004993 ORTHO05D008532 2.2e-55 220.3 137 79.6
Cpa.g.c35723 Carica papaya HOM05D004993 ORTHO05D008532 4.2e-54 216.1 136 75.7
ECA248G2500 Erigeron canadensis HOM05D004993 ORTHO05D008532 2.2e-50 203.8 254 46.9
SEGI_28994 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 2.1e-45 187.2 136 64.7
Actinidia13671 Actinidia chinensis HOM05D004993 ORTHO05D008532 1.6e-40 171.0 98 83.7
Cre10.g442950 Chlamydomonas reinhardtii HOM05D004993 ORTHO05D008532 1.8e-28 131.0 313 30.4
MCO14G082 Micromonas commoda HOM05D004993 ORTHO05D008532 1.2e-27 128.3 284 34.9
Pp3c27_8380 Physcomitrium patens HOM05D004993 ORTHO05D008532 4.4e-27 126.3 248 33.9
SEGI_13194 Sequoiadendron giganteum HOM05D004993 ORTHO05D008532 2.5e-14 84.0 51 70.6
CARHR029040 Cardamine hirsuta HOM05D004993 ORTHO05D008532 5.6e-14 82.8 97 48.5
Migut.G01033 Erythranthe guttata HOM05D004993 ORTHO05D008532 2.6e-11 73.9 49 65.3


User provided reference genes

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