Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G630.39 Capsicum annuum HOM05D009680 ORTHO05D010443 2.9e-50 201.4 92 100.0
CAN.G630.38 Capsicum annuum HOM05D009680 ORTHO05D010443 8.8e-39 163.3 92 81.5
PGSC0003DMG400026952 Solanum tuberosum HOM05D009680 ORTHO05D010443 1.1e-28 129.8 92 63.0
PGSC0003DMG400026953 Solanum tuberosum HOM05D009680 ORTHO05D010443 2.7e-27 125.2 89 61.8
CAN.G630.4 Capsicum annuum HOM05D009680 ORTHO05D010443 4.5e-27 124.4 92 64.1
CAN.G630.3 Capsicum annuum HOM05D009680 ORTHO05D010443 1.1e-25 119.8 93 62.4
Peaxi162Scf00620g00054 Petunia axillaris HOM05D009680 ORTHO05D010443 9.4e-25 116.7 89 62.9
Sopen08g028370 Solanum pennellii HOM05D000015 ORTHO05D000803 4.7e-24 114.4 92 60.9
Solyc08g080020.1 Solanum lycopersicum HOM05D009680 ORTHO05D010443 8.0e-24 113.6 89 61.8
Nitab4.5_0000014g0490 Nicotiana tabacum HOM05D009680 ORTHO05D010443 4.4e-22 107.8 86 58.1
CAN.G630.1 Capsicum annuum HOM05D009680 ORTHO05D010443 8.3e-21 103.6 87 55.2
Peaxi162Scf01517g00130 Petunia axillaris HOM05D009680 ORTHO05D010443 2.4e-20 102.1 87 52.9
Peaxi162Scf00620g00517 Petunia axillaris HOM05D009680 ORTHO05D010443 7.0e-20 100.5 86 52.3
CAN.G1513.6 Capsicum annuum HOM05D009680 ORTHO05D010443 9.1e-20 100.1 87 51.7
CAN.G630.2 Capsicum annuum HOM05D009680 ORTHO05D000653 1.2e-19 99.8 87 55.2
Nitab4.5_0006484g0030 Nicotiana tabacum HOM05D009680 ORTHO05D000653 1.2e-19 99.8 88 47.7
Peaxi162Scf00690g00221 Petunia axillaris HOM05D009680 ORTHO05D010443 2.0e-19 99.0 90 50.0
PGSC0003DMG400005142 Solanum tuberosum HOM05D009680 ORTHO05D010443 1.0e-15 86.7 86 45.3
Nitab4.5_0010303g0010 Nicotiana tabacum HOM05D009680 ORTHO05D010443 5.7e-14 80.9 50 66.0
CARHR176870 Cardamine hirsuta HOM05D008628 ORTHO05D010443 1.6e-11 72.8 90 42.2
Peaxi162Scf00897g00013 Petunia axillaris HOM05D008628 ORTHO05D010443 1.6e-11 72.8 95 42.1
Nitab4.5_0000881g0060 Nicotiana tabacum HOM05D008628 ORTHO05D010443 2.0e-11 72.4 95 41.1
Nitab4.5_0009740g0010 Nicotiana tabacum HOM05D008628 ORTHO05D010443 2.0e-11 72.4 95 41.1
Solyc11g007050.1 Solanum lycopersicum HOM05D009680 ORTHO05D000653 5.9e-11 70.9 87 42.5
Sopen11g002970 Solanum pennellii HOM05D009680 ORTHO05D000653 1.3e-10 69.7 89 41.6
Hma1.2p1_2755F.1_g327950 Hydrangea macrophylla HOM05D008628 ORTHO05D010443 6.6e-10 67.4 96 40.6
THA.LOC109116389 Tarenaya hassleriana HOM05D008628 ORTHO05D010443 2.5e-09 65.5 90 38.9
Sp2g10200 Schrenkiella parvula HOM05D008628 ORTHO05D010443 4.3e-09 64.7 90 41.1
MD15G1392900 Malus domestica HOM05D001004 ORTHO05D000653 7.3e-09 63.9 87 39.1
Oeu017841.1 Olea europaea HOM05D001004 ORTHO05D000653 1.2e-08 63.2 88 39.8
Oeu017833.1 Olea europaea HOM05D001004 ORTHO05D000653 1.6e-08 62.8 88 38.6
Oeu030752.1 Olea europaea HOM05D008628 ORTHO05D000653 3.6e-08 61.6 88 36.4
Sp2g10210 Schrenkiella parvula HOM05D008628 ORTHO05D010443 1.4e-07 59.7 91 38.5
Migut.L00816 Erythranthe guttata HOM05D001004 ORTHO05D000653 8.9e-07 57.0 89 39.3
Actinidia05828 Actinidia chinensis HOM05D008628 ORTHO05D010443 2.0e-06 55.8 85 36.5
Eucgr.B01872 Eucalyptus grandis HOM05D001004 ORTHO05D000653 2.0e-06 55.8 94 36.2
Cc07_g18340 Coffea canephora HOM05D001004 ORTHO05D000653 2.6e-06 55.5 87 39.1
Eucgr.F04168 Eucalyptus grandis HOM05D001004 ORTHO05D000653 2.6e-06 55.5 95 35.8
AT3G46860 Arabidopsis thaliana HOM05D001004 ORTHO05D000653 5.7e-06 54.3 89 32.6
Duzib114G0002 Durio zibethinus HOM05D001004 ORTHO05D000653 5.7e-06 54.3 88 37.5
Cfa005539 Carpinus fangiana HOM05D001004 ORTHO05D000653 7.5e-06 53.9 91 36.3
Migut.H02350 Erythranthe guttata HOM05D009680 ORTHO05D000653 7.5e-06 53.9 88 36.4
Eucgr.C02276 Eucalyptus grandis HOM05D001004 ORTHO05D000653 7.5e-06 53.9 91 37.4
Thhalv10010855m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 7.5e-06 53.9 69 37.7
AUR62006912 Chenopodium quinoa HOM05D001004 ORTHO05D000653 9.8e-06 53.5 89 39.3
Peaxi162Scf00897g00113 Petunia axillaris HOM05D000048 ORTHO05D000207 9.8e-06 53.5 80 40.0


User provided reference genes

Program Settings