Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G630.35 Capsicum annuum HOM05D000177 ORTHO05D004733 3.8e-41 171.0 83 100.0
CAN.G1418.1 Capsicum annuum HOM05D000177 ORTHO05D004733 4.7e-15 84.3 49 83.7
Nitab4.5_0000335g0100 Nicotiana tabacum HOM05D000177 ORTHO05D004733 4.7e-15 84.3 49 83.7
Nitab4.5_0000511g0070 Nicotiana tabacum HOM05D000177 ORTHO05D004733 4.7e-15 84.3 49 83.7
Solyc09g005250.3 Solanum lycopersicum HOM05D000177 ORTHO05D004733 4.7e-15 84.3 49 83.7
Sopen09g001220 Solanum pennellii HOM05D000177 ORTHO05D004733 4.7e-15 84.3 49 83.7
PGSC0003DMG400011790 Solanum tuberosum HOM05D000177 ORTHO05D004733 4.7e-15 84.3 49 83.7
VMungo1383G1370 Vigna mungo HOM05D000177 ORTHO05D004733 4.7e-15 84.3 61 67.2
Actinidia20731 Actinidia chinensis HOM05D000177 ORTHO05D004733 6.1e-15 84.0 56 75.0
Ca_04438_v3 Cicer arietinum L. HOM05D000177 ORTHO05D004733 6.1e-15 84.0 57 70.2
Glyma.03G059200 Glycine max HOM05D000177 ORTHO05D004733 6.1e-15 84.0 57 70.2
Migut.J00175 Erythranthe guttata HOM05D000177 ORTHO05D004733 8.0e-15 83.6 49 83.7
Potri.006G099800 Populus trichocarpa HOM05D000177 ORTHO05D004733 8.0e-15 83.6 49 83.7
VMungo0331G0988 Vigna mungo HOM05D000177 ORTHO05D004733 8.0e-15 83.6 57 70.2
Potri.016G115400 Populus trichocarpa HOM05D000177 ORTHO05D004733 1.0e-14 83.2 56 75.0
Actinidia11590 Actinidia chinensis HOM05D000177 ORTHO05D004733 1.4e-14 82.8 49 81.6
Phvul.010G001700 Phaseolus vulgaris HOM05D000177 ORTHO05D004733 1.4e-14 82.8 49 75.5
arahy.Tifrunner.gnm1.ann1.B4YJ7T Arachis hypogaea HOM05D000177 ORTHO05D004733 1.8e-14 82.4 49 77.6
arahy.Tifrunner.gnm1.ann1.PUCN24 Arachis hypogaea HOM05D000177 ORTHO05D004733 1.8e-14 82.4 49 77.6
Phvul.008G104600 Phaseolus vulgaris HOM05D000177 ORTHO05D004733 2.3e-14 82.0 60 66.7
MSTRG.19012 Avicennia marina HOM05D000177 ORTHO05D004733 3.0e-14 81.6 49 79.6
CSS0031537 Camellia sinensis var. sinensis HOM05D000177 ORTHO05D004733 3.0e-14 81.6 49 79.6
Oeu064502.1 Olea europaea HOM05D000177 ORTHO05D004733 3.0e-14 81.6 49 79.6
CSS0025675 Camellia sinensis var. sinensis HOM05D000177 ORTHO05D004733 4.0e-14 81.3 49 79.6
CiPaw.10G156300 Carya illinoinensis HOM05D000177 ORTHO05D004733 4.0e-14 81.3 49 77.6
COL.COLO4_14541 Corchorus olitorius HOM05D007005 ORTHO05D004733 4.0e-14 81.3 49 77.6
Haze_20999 Corylus avellana HOM05D000177 ORTHO05D004733 4.0e-14 81.3 49 77.6
DCAR_024025 Daucus carota HOM05D000177 ORTHO05D004733 5.2e-14 80.9 49 77.6
Glyma.07G149500 Glycine max HOM05D000177 ORTHO05D004733 5.2e-14 80.9 57 68.4
Peaxi162Scf00141g00095 Petunia axillaris HOM05D000177 ORTHO05D004733 5.2e-14 80.9 49 77.6
Aqoxy4G02582 Aquilegia oxysepala HOM05D000177 ORTHO05D004733 6.8e-14 80.5 49 77.6
Ca_07636_v3 Cicer arietinum L. HOM05D000177 ORTHO05D004733 6.8e-14 80.5 57 64.9
ClCG04G007030 Citrullus lanatus HOM05D000177 ORTHO05D004733 6.8e-14 80.5 49 75.5
Lj2A76T76 Lonicera japonica HOM05D000177 ORTHO05D004733 6.8e-14 80.5 49 77.6
MD04G1151500 Malus domestica HOM05D000177 ORTHO05D004733 6.8e-14 80.5 49 77.6
Prupe.6G276700 Prunus persica HOM05D000177 ORTHO05D004733 6.8e-14 80.5 49 77.6
Cpa.g.sc11.156 Carica papaya HOM05D000177 ORTHO05D004733 8.8e-14 80.1 49 75.5
Ciclev10011924m.g Citrus clementina HOM05D000177 ORTHO05D004733 8.8e-14 80.1 49 77.6
FvH4_6g11494 Fragaria vesca HOM05D000177 ORTHO05D004733 8.8e-14 80.1 56 69.6
FAN05G3292 Fragaria x ananassa HOM05D007005 ORTHO05D008799 8.8e-14 80.1 56 69.6
FAN05G3789 Fragaria x ananassa HOM05D007005 ORTHO05D008799 8.8e-14 80.1 56 69.6
Lj1g0014983 Lotus japonicus HOM05D000177 ORTHO05D004733 8.8e-14 80.1 57 64.9
MD12G1165700 Malus domestica HOM05D000177 ORTHO05D004733 8.8e-14 80.1 49 77.6
SGA_v2.0_scaffold85G26739 Striga asiatica HOM05D000177 ORTHO05D004733 8.8e-14 80.1 49 77.6
CANSAT35G1330 Cannabis sativa HOM05D000177 ORTHO05D004733 1.2e-13 79.7 49 77.6
Dinv11074 Davidia involucrata HOM05D000177 ORTHO05D004733 1.2e-13 79.7 49 79.6
Duzib093G0514 Durio zibethinus HOM05D000177 ORTHO05D004733 1.2e-13 79.7 49 75.5
TAR633G0924 Trochodendron aralioides HOM05D000177 ORTHO05D004733 1.2e-13 79.7 49 75.5
arahy.Tifrunner.gnm1.ann1.J8Y09Q Arachis hypogaea HOM05D000177 ORTHO05D004733 1.5e-13 79.3 58 62.1
arahy.Tifrunner.gnm1.ann1.QVT6SX Arachis hypogaea HOM05D000177 ORTHO05D004733 1.5e-13 79.3 58 62.1
ECA236G4005 Erigeron canadensis HOM05D000177 ORTHO05D004733 1.5e-13 79.3 53 75.5
Medtr4g016730 Medicago truncatula HOM05D000177 ORTHO05D004733 1.5e-13 79.3 57 66.7
THA.LOC104827053 Tarenaya hassleriana HOM05D000177 ORTHO05D004733 1.5e-13 79.3 47 78.7
TWI53G0391 Tripterygium wilfordii HOM05D000177 ORTHO05D004733 1.5e-13 79.3 49 75.5
GSVIVG01033963001 Vitis vinifera HOM05D000177 ORTHO05D004733 1.5e-13 79.3 49 77.6
ClCG10G022100 Citrullus lanatus HOM05D000177 ORTHO05D004733 2.0e-13 79.0 56 69.6
MELO3C003295.2 Cucumis melo HOM05D000177 ORTHO05D004733 2.0e-13 79.0 49 73.5
CsaV3_4G026250 Cucumis sativus L. HOM05D000177 ORTHO05D004733 2.0e-13 79.0 49 73.5
FAN09G1008 Fragaria x ananassa HOM05D000872 ORTHO05D004733 2.0e-13 79.0 56 67.9
FAN14G4100 Fragaria x ananassa HOM05D000177 ORTHO05D004733 2.0e-13 79.0 49 75.5
AUR62010464 Chenopodium quinoa HOM05D000177 ORTHO05D004733 2.6e-13 78.6 49 75.5
AUR62030446 Chenopodium quinoa HOM05D000177 ORTHO05D004733 2.6e-13 78.6 49 75.5
Gohir.A04G089900 Gossypium hirsutum HOM05D000177 ORTHO05D004733 2.6e-13 78.6 49 73.5
Gohir.D04G130000 Gossypium hirsutum HOM05D000177 ORTHO05D004733 2.6e-13 78.6 49 73.5
Gorai.012G113500 Gossypium raimondii HOM05D000177 ORTHO05D004733 2.6e-13 78.6 49 73.5
Lalb_Chr07g0193561 Lupinus albus HOM05D000177 ORTHO05D004733 2.6e-13 78.6 60 65.0
Manes.09G103800 Manihot esculenta HOM05D000177 ORTHO05D004733 2.6e-13 78.6 49 77.6
THA.LOC104805860 Tarenaya hassleriana HOM05D000177 ORTHO05D004733 2.6e-13 78.6 49 75.5
TPR.G13324 Trifolium pratense HOM05D000177 ORTHO05D004733 2.6e-13 78.6 57 64.9
Aa31sc318G30 Aethionema arabicum HOM05D000177 ORTHO05D004733 3.4e-13 78.2 50 72.0
Gohir.A01G227600 Gossypium hirsutum HOM05D000177 ORTHO05D004733 3.4e-13 78.2 49 73.5
PGR031G2488 Punica granatum HOM05D000177 ORTHO05D004733 3.4e-13 78.2 49 73.5
CsaV3_3G033820 Cucumis sativus L. HOM05D000177 ORTHO05D004733 4.4e-13 77.8 56 67.9
Psat7g245560 Pisum sativum HOM05D000177 ORTHO05D004733 4.4e-13 77.8 57 64.9
SalBow5G2388 Salvia bowleyana HOM05D000177 ORTHO05D004733 4.4e-13 77.8 47 76.6
Thecc.05G016600 Theobroma cacao HOM05D000177 ORTHO05D004733 4.4e-13 77.8 49 75.5
TAR636G3607 Trochodendron aralioides HOM05D000872 ORTHO05D004733 4.4e-13 77.8 49 73.5
vmacro08872 Vaccinium macrocarpon HOM05D000177 ORTHO05D004733 4.4e-13 77.8 49 77.6
Aqoxy4G02581 Aquilegia oxysepala HOM05D000177 ORTHO05D004733 5.7e-13 77.4 49 73.5
Cc06_g01410 Coffea canephora HOM05D000177 ORTHO05D004733 5.7e-13 77.4 47 78.7
MELO3C009171.2 Cucumis melo HOM05D000177 ORTHO05D004733 5.7e-13 77.4 56 67.9
Lj3g0015490 Lotus japonicus HOM05D000177 ORTHO05D004733 5.7e-13 77.4 56 66.1
Lalb_Chr03g0043311 Lupinus albus HOM05D000177 ORTHO05D004733 5.7e-13 77.4 57 64.9
AT3G51870 Arabidopsis thaliana HOM05D000177 ORTHO05D004733 7.5e-13 77.0 56 66.1
Carub.0005s1822 Capsella rubella HOM05D000177 ORTHO05D004733 7.5e-13 77.0 56 66.1
ECA247G2038 Erigeron canadensis HOM05D003109 ORTHO05D004733 7.5e-13 77.0 46 78.3
HanXRQChr10g0299931 Helianthus annuus HOM05D000177 ORTHO05D004733 7.5e-13 77.0 46 78.3
DCAR_015420 Daucus carota HOM05D000177 ORTHO05D004733 9.8e-13 76.6 49 75.5
Hma1.2p1_0805F.1_g221210 Hydrangea macrophylla HOM05D000177 ORTHO05D004733 9.8e-13 76.6 47 76.6
Lsat_1_v5_gn_8_102200 Lactuca sativa HOM05D000177 ORTHO05D004733 9.8e-13 76.6 47 76.6
Nn2g11476 Nelumbo nucifera HOM05D000177 ORTHO05D004733 9.8e-13 76.6 56 67.9
RcHm_v2.0_Chr3g0463201 Rosa chinensis HOM05D000177 ORTHO05D004733 9.8e-13 76.6 56 67.9
Eucgr.A00503 Eucalyptus grandis HOM05D000177 ORTHO05D004733 1.3e-12 76.3 49 71.4
Hma1.2p1_0362F.1_g136200 Hydrangea macrophylla HOM05D000177 ORTHO05D004733 1.3e-12 76.3 50 72.0
Medtr7g068340 Medicago truncatula HOM05D000177 ORTHO05D004733 1.3e-12 76.3 46 73.9
QL07p035778 Quercus lobata HOM05D000177 ORTHO05D004733 1.3e-12 76.3 48 72.9
Dinv23101 Davidia involucrata HOM05D000177 ORTHO05D004733 1.7e-12 75.9 46 80.4
Thhalv10010447m.g Eutrema salsugineum HOM05D000177 ORTHO05D004733 1.7e-12 75.9 49 71.4
Glyma.18G200367 Glycine max HOM05D000177 ORTHO05D004733 1.7e-12 75.9 58 67.2
Sp5g10400 Schrenkiella parvula HOM05D000177 ORTHO05D004733 1.7e-12 75.9 49 71.4
Sc22g0002440 Simmondsia chinensis HOM05D000177 ORTHO05D004733 1.7e-12 75.9 58 63.8
TPR.G8141 Trifolium pratense HOM05D000177 ORTHO05D004733 1.7e-12 75.9 56 64.3
Aa31LG1G23120 Aethionema arabicum HOM05D000177 ORTHO05D004733 2.2e-12 75.5 49 69.4
Gohir.D01G217400 Gossypium hirsutum HOM05D000177 ORTHO05D004733 2.8e-12 75.1 49 71.4
Gorai.002G263700 Gossypium raimondii HOM05D000177 ORTHO05D004733 2.8e-12 75.1 49 71.4
Lsat_1_v5_gn_9_34521 Lactuca sativa HOM05D000177 ORTHO05D004733 2.8e-12 75.1 46 76.1
Lj3A954G61 Lonicera japonica HOM05D000177 ORTHO05D004733 2.8e-12 75.1 49 73.5
Psat3g128760 Pisum sativum HOM05D000177 ORTHO05D004733 2.8e-12 75.1 46 71.7
BcaB02g08599 Brassica carinata HOM05D000177 ORTHO05D004733 3.7e-12 74.7 56 64.3
BcaC02g09296 Brassica carinata HOM05D000177 ORTHO05D004733 3.7e-12 74.7 56 64.3
A04p07440 Brassica napus HOM05D000177 ORTHO05D004733 3.7e-12 74.7 56 64.3
C04p41090 Brassica napus HOM05D000177 ORTHO05D004733 3.7e-12 74.7 56 64.3
BolC4t25693H Brassica oleracea HOM05D000177 ORTHO05D004733 3.7e-12 74.7 56 64.3
CARHR211860 Cardamine hirsuta HOM05D000177 ORTHO05D004733 3.7e-12 74.7 49 67.3
HanXRQChr11g0331591 Helianthus annuus HOM05D000177 ORTHO05D004733 3.7e-12 74.7 47 74.5
Rhsim04G0128500 Rhododendron simsii HOM05D000177 ORTHO05D004733 3.7e-12 74.7 49 75.5
AL6G10550 Arabidopsis lyrata HOM05D000177 ORTHO05D004733 4.8e-12 74.3 49 67.3
AT5G01500 Arabidopsis thaliana HOM05D000177 ORTHO05D004733 4.8e-12 74.3 49 67.3
CARHR161500 Cardamine hirsuta HOM05D000177 ORTHO05D004733 4.8e-12 74.3 47 72.3
Sed0012294 Sechium edule HOM05D000177 ORTHO05D004733 4.8e-12 74.3 47 74.5
MBI14_g31683_MAGBIO Magnolia biondii HOM05D000177 ORTHO05D004733 6.3e-12 73.9 49 71.4
TAR623G0853 Trochodendron aralioides HOM05D000177 ORTHO05D004733 6.3e-12 73.9 46 78.3
ATR0618G036 Amborella trichopoda HOM05D000177 ORTHO05D004733 1.1e-11 73.2 57 61.4
EL10Ac5g12568 Beta vulgaris HOM05D000177 ORTHO05D004733 1.1e-11 73.2 48 72.9
BraA04t16440Z Brassica rapa HOM05D000177 ORTHO05D004733 1.1e-11 73.2 56 64.3
Carub.0006s0033 Capsella rubella HOM05D000177 ORTHO05D004733 1.1e-11 73.2 49 65.3
Hund11014 Selenicereus undatus HOM05D000177 ORTHO05D004733 1.1e-11 73.2 49 71.4
unitig_699.g19382 Utricularia gibba HOM05D000177 ORTHO05D004733 1.1e-11 73.2 49 71.4
BcaB01g06099 Brassica carinata HOM05D000177 ORTHO05D004733 1.4e-11 72.8 49 65.3
BcaB01g06230 Brassica carinata HOM05D000177 ORTHO05D004733 1.4e-11 72.8 49 65.3
BcaB05g21920 Brassica carinata HOM05D000177 ORTHO05D004733 1.4e-11 72.8 49 65.3
A03p00290 Brassica napus HOM05D000177 ORTHO05D004733 1.4e-11 72.8 49 65.3
C03p00460 Brassica napus HOM05D000177 ORTHO05D004733 1.4e-11 72.8 49 65.3
BolC3t12611H Brassica oleracea HOM05D000177 ORTHO05D004733 1.4e-11 72.8 49 65.3
BraA03t09420Z Brassica rapa HOM05D000177 ORTHO05D004733 1.4e-11 72.8 49 65.3
Thhalv10013664m.g Eutrema salsugineum HOM05D000177 ORTHO05D004733 1.4e-11 72.8 49 65.3
Sp6g40780 Schrenkiella parvula HOM05D000177 ORTHO05D004733 1.4e-11 72.8 49 65.3
Sabra16G0111300 Salix brachista HOM05D000177 ORTHO05D004733 2.4e-11 72.0 74 56.8
SEGI_01149 Sequoiadendron giganteum HOM05D000177 ORTHO05D004733 4.1e-11 71.2 56 64.3
Os01g0265200 Oryza sativa ssp. japonica HOM05D000177 ORTHO05D004733 5.4e-11 70.9 55 63.6
SHI12830 Sapria himalayana HOM05D000872 ORTHO05D004733 5.4e-11 70.9 49 67.3
HPP92_015495 Vanilla planifolia HOM05D000177 ORTHO05D004733 5.4e-11 70.9 49 69.4
CAN.G630.33 Capsicum annuum HOM05D000177 ORTHO05D000004 9.1e-11 70.1 44 79.5
CDE04G0705 Ceratophyllum demersum HOM05D000177 ORTHO05D004733 9.1e-11 70.1 60 61.7
PSO384G1621 Papaver somniferum HOM05D000177 ORTHO05D004733 9.1e-11 70.1 56 60.7
Zm00001eb128220 Zea mays HOM05D000177 ORTHO05D004733 1.2e-10 69.7 55 65.5
PSO339G5288 Papaver somniferum HOM05D000177 ORTHO05D004733 1.6e-10 69.3 46 69.6
SMO169G0209 Selaginella moellendorffii HOM05D000177 ORTHO05D004733 2.7e-10 68.6 56 60.7
Zm00001eb168940 Zea mays HOM05D000493 ORTHO05D004733 2.7e-10 68.6 55 65.5
AagrBONN_evm.TU.Sc2ySwM_344.1635 Anthoceros agrestis HOM05D000177 ORTHO05D004733 5.9e-10 67.4 57 56.1
HanXRQChr06g0167761 Helianthus annuus HOM05D000177 ORTHO05D004733 5.9e-10 67.4 44 72.7
Pp3c13_8750 Physcomitrium patens HOM05D000177 ORTHO05D004733 1.3e-09 66.2 55 58.2
Sabra06G0076700 Salix brachista HOM05D000177 ORTHO05D004733 1.7e-09 65.9 80 48.8
Pp3c12_8850 Physcomitrium patens HOM05D000177 ORTHO05D004733 2.2e-09 65.5 54 59.3
C03p11660 Brassica napus HOM05D000177 ORTHO05D004733 1.5e-08 62.8 47 63.8
Lj3g0001169 Lotus japonicus HOM05D000177 ORTHO05D004733 4.2e-08 61.2 44 70.5
BolC3t13637H Brassica oleracea HOM05D000177 ORTHO05D004733 3.6e-07 58.2 45 62.2
Mapoly0080s0069 Marchantia polymorpha HOM05D000177 ORTHO05D004733 3.0e-06 55.1 48 52.1


User provided reference genes

Program Settings