Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G630.3 Capsicum annuum HOM05D009680 ORTHO05D010443 5.8e-51 203.8 91 100.0
CAN.G630.4 Capsicum annuum HOM05D009680 ORTHO05D010443 1.6e-45 185.7 90 91.1
Solyc08g080020.1 Solanum lycopersicum HOM05D009680 ORTHO05D010443 2.4e-36 155.2 90 75.6
Sopen08g028370 Solanum pennellii HOM05D000015 ORTHO05D000803 1.5e-35 152.5 86 77.9
Peaxi162Scf00620g00054 Petunia axillaris HOM05D009680 ORTHO05D010443 1.3e-31 139.4 91 67.0
Nitab4.5_0000014g0490 Nicotiana tabacum HOM05D009680 ORTHO05D010443 9.6e-30 133.3 85 68.2
PGSC0003DMG400026953 Solanum tuberosum HOM05D009680 ORTHO05D010443 4.8e-29 131.0 90 62.2
Nitab4.5_0006484g0030 Nicotiana tabacum HOM05D009680 ORTHO05D000653 5.3e-28 127.5 87 58.6
CAN.G630.2 Capsicum annuum HOM05D009680 ORTHO05D000653 1.2e-27 126.3 87 67.8
CAN.G630.1 Capsicum annuum HOM05D009680 ORTHO05D010443 2.0e-27 125.6 94 64.9
Peaxi162Scf00690g00221 Petunia axillaris HOM05D009680 ORTHO05D010443 7.6e-27 123.6 87 62.1
CAN.G1513.6 Capsicum annuum HOM05D009680 ORTHO05D010443 3.8e-26 121.3 88 60.2
PGSC0003DMG400026952 Solanum tuberosum HOM05D009680 ORTHO05D010443 1.1e-25 119.8 92 58.7
CAN.G630.39 Capsicum annuum HOM05D009680 ORTHO05D010443 4.2e-25 117.9 93 62.4
CAN.G630.38 Capsicum annuum HOM05D009680 ORTHO05D010443 1.0e-23 113.2 93 62.4
Peaxi162Scf01517g00130 Petunia axillaris HOM05D009680 ORTHO05D010443 1.8e-23 112.5 87 59.8
Peaxi162Scf00620g00517 Petunia axillaris HOM05D009680 ORTHO05D010443 5.1e-23 110.9 86 59.3
PGSC0003DMG400005142 Solanum tuberosum HOM05D009680 ORTHO05D010443 1.7e-18 95.9 86 48.8
Sopen11g002970 Solanum pennellii HOM05D009680 ORTHO05D000653 1.0e-15 86.7 92 47.8
Solyc11g007050.1 Solanum lycopersicum HOM05D009680 ORTHO05D000653 1.8e-15 85.9 92 46.7
Nitab4.5_0010303g0010 Nicotiana tabacum HOM05D009680 ORTHO05D010443 2.2e-13 79.0 51 68.6
Peaxi162Scf00897g00013 Petunia axillaris HOM05D008628 ORTHO05D010443 1.1e-12 76.6 94 41.5
MD15G1392900 Malus domestica HOM05D001004 ORTHO05D000653 1.4e-12 76.3 86 44.2
Nitab4.5_0000881g0060 Nicotiana tabacum HOM05D008628 ORTHO05D010443 2.4e-12 75.5 94 42.6
Nitab4.5_0009740g0010 Nicotiana tabacum HOM05D008628 ORTHO05D010443 2.4e-12 75.5 94 42.6
Hma1.2p1_2755F.1_g327950 Hydrangea macrophylla HOM05D008628 ORTHO05D010443 1.2e-11 73.2 95 41.1
Oeu030752.1 Olea europaea HOM05D008628 ORTHO05D000653 2.6e-11 72.0 87 43.7
TAR376G1036 Trochodendron aralioides HOM05D001004 ORTHO05D000653 2.6e-11 72.0 86 46.5
Thhalv10011055m.g Eutrema salsugineum HOM05D001004 ORTHO05D000653 4.5e-11 71.2 88 40.9
Oeu017833.1 Olea europaea HOM05D001004 ORTHO05D000653 1.0e-10 70.1 87 44.8
Oeu017841.1 Olea europaea HOM05D001004 ORTHO05D000653 1.0e-10 70.1 87 43.7
TAR376G0093 Trochodendron aralioides HOM05D001004 ORTHO05D000653 1.0e-10 70.1 88 42.0
AT3G46860 Arabidopsis thaliana HOM05D001004 ORTHO05D000653 1.3e-10 69.7 87 41.4
MELO3C000685.2 Cucumis melo HOM05D001004 ORTHO05D000653 5.0e-10 67.8 86 37.2
PGSC0003DMG400034659 Solanum tuberosum HOM05D009680 ORTHO05D010443 9.4e-09 63.5 92 39.1
Eucgr.F04168 Eucalyptus grandis HOM05D001004 ORTHO05D000653 1.2e-08 63.2 88 40.9
Carub.0008s0288 Capsella rubella HOM05D008628 ORTHO05D010443 1.6e-08 62.8 93 41.9
Sp2g10200 Schrenkiella parvula HOM05D008628 ORTHO05D010443 1.6e-08 62.8 92 39.1
Duzib114G0002 Durio zibethinus HOM05D001004 ORTHO05D000653 2.1e-08 62.4 87 37.9
Actinidia05828 Actinidia chinensis HOM05D008628 ORTHO05D010443 3.6e-08 61.6 96 39.6
FAN28G2625 Fragaria x ananassa HOM05D001004 ORTHO05D000653 3.6e-08 61.6 73 38.4
Gohir.A05G281700 Gossypium hirsutum HOM05D001004 ORTHO05D000653 6.1e-08 60.8 87 37.9
Gorai.009G297300 Gossypium raimondii HOM05D001004 ORTHO05D000653 6.1e-08 60.8 87 37.9
Eucgr.B01872 Eucalyptus grandis HOM05D001004 ORTHO05D000653 7.9e-08 60.5 93 36.6
Gohir.A05G281800 Gossypium hirsutum HOM05D001004 ORTHO05D000653 7.9e-08 60.5 87 37.9
Aqoxy117s001 Aquilegia oxysepala HOM05D001004 ORTHO05D000653 1.0e-07 60.1 81 39.5
Aqoxy3G01749 Aquilegia oxysepala HOM05D001004 ORTHO05D000653 1.0e-07 60.1 81 39.5
Thhalv10010855m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 1.0e-07 60.1 90 37.8
Gohir.D05G283088 Gossypium hirsutum HOM05D001004 ORTHO05D000653 1.4e-07 59.7 87 36.8
Gorai.009G297200 Gossypium raimondii HOM05D001004 ORTHO05D000653 1.4e-07 59.7 87 36.8
Gorai.009G297400 Gossypium raimondii HOM05D001004 ORTHO05D000653 1.4e-07 59.7 87 36.8
Migut.C00655 Erythranthe guttata HOM05D009680 ORTHO05D000653 1.8e-07 59.3 86 37.2
Migut.C00658 Erythranthe guttata HOM05D001004 ORTHO05D000653 3.0e-07 58.5 86 37.2
Thhalv10001145m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 3.0e-07 58.5 92 39.1
Thhalv10011127m.g Eutrema salsugineum HOM05D001004 ORTHO05D000653 3.0e-07 58.5 72 44.4
AL8G13560 Arabidopsis lyrata HOM05D008628 ORTHO05D010443 3.9e-07 58.2 88 36.4
Carub.0003s2826 Capsella rubella HOM05D001004 ORTHO05D000653 5.1e-07 57.8 86 38.4
Eucgr.H02107 Eucalyptus grandis HOM05D001004 ORTHO05D000653 5.1e-07 57.8 61 45.9
Thhalv10001147m.g Eutrema salsugineum HOM05D008628 ORTHO05D010443 5.1e-07 57.8 92 39.1
Nn1g09270 Nelumbo nucifera HOM05D008628 ORTHO05D000653 5.1e-07 57.8 87 39.1
Peaxi162Scf00897g00113 Petunia axillaris HOM05D000048 ORTHO05D000207 5.1e-07 57.8 78 38.5
C07p28310 Brassica napus HOM05D008628 ORTHO05D010443 8.8e-07 57.0 91 37.4
BolC7t43371H Brassica oleracea HOM05D008628 ORTHO05D010443 8.8e-07 57.0 91 37.4
MELO3C034586.2 Cucumis melo HOM05D001004 ORTHO05D000653 8.8e-07 57.0 86 36.0
Eucgr.B01966 Eucalyptus grandis HOM05D001004 ORTHO05D000653 8.8e-07 57.0 93 34.4
Cfa010162 Carpinus fangiana HOM05D009680 ORTHO05D000653 1.1e-06 56.6 86 34.9
Eucgr.H05147 Eucalyptus grandis HOM05D001004 ORTHO05D000653 1.1e-06 56.6 89 40.4
Carub.0005s1637 Capsella rubella HOM05D008628 ORTHO05D010443 1.5e-06 56.2 87 41.4
CARHR155530 Cardamine hirsuta HOM05D009680 ORTHO05D000653 1.5e-06 56.2 69 44.9
Eucgr.F00211 Eucalyptus grandis HOM05D001004 ORTHO05D000653 1.5e-06 56.2 61 42.6
RcHm_v2.0_Chr2g0105871 Rosa chinensis HOM05D001004 ORTHO05D000653 1.5e-06 56.2 90 37.8
A06p46700 Brassica napus HOM05D008628 ORTHO05D010443 2.0e-06 55.8 89 36.0
Sp2g10210 Schrenkiella parvula HOM05D008628 ORTHO05D010443 2.0e-06 55.8 86 38.4
Peaxi162Scf79264g00001 Petunia axillaris HOM05D008628 ORTHO05D010443 2.6e-06 55.5 63 42.9
THA.LOC109116389 Tarenaya hassleriana HOM05D008628 ORTHO05D010443 3.3e-06 55.1 92 38.0
BraA06t27542Z Brassica rapa HOM05D008628 ORTHO05D010443 4.4e-06 54.7 89 36.0
Eucgr.H05126 Eucalyptus grandis HOM05D001004 ORTHO05D000653 4.4e-06 54.7 61 39.3
ClCG02G012910 Citrullus lanatus HOM05D001004 ORTHO05D000653 5.7e-06 54.3 86 36.0
Dinv43966 Davidia involucrata HOM05D008628 ORTHO05D010443 5.7e-06 54.3 64 40.6
Migut.A00977 Erythranthe guttata HOM05D001004 ORTHO05D000653 5.7e-06 54.3 61 41.0
Gohir.A05G281850 Gossypium hirsutum HOM05D001004 ORTHO05D000653 5.7e-06 54.3 61 42.6
Eucgr.I00166 Eucalyptus grandis HOM05D001004 ORTHO05D000653 7.4e-06 53.9 61 41.0
Oeu017850.1 Olea europaea HOM05D001004 ORTHO05D000653 7.4e-06 53.9 87 36.8
COL.COLO4_35913 Corchorus olitorius HOM05D001004 ORTHO05D000653 9.7e-06 53.5 86 36.0
Eucgr.I00167 Eucalyptus grandis HOM05D001004 ORTHO05D000653 9.7e-06 53.5 61 41.0


User provided reference genes

Program Settings