Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G628.86 Capsicum annuum HOM05D007877 ORTHO05D009957 7.5e-203 710.3 357 100.0
CAN.G502.14 Capsicum annuum HOM05D003467 ORTHO05D004220 1.9e-28 131.0 89 76.4
Solyc00g500237.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 9.0e-23 112.1 61 86.9
DCAR_032450 Daucus carota HOM05D007877 ORTHO05D009957 2.0e-22 110.9 56 92.9
Lj2P1225T96 Lonicera japonica HOM05D007877 ORTHO05D009957 2.0e-22 110.9 56 92.9
Solyc00g500168.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 2.0e-22 110.9 56 92.9
Solyc00g500346.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 2.0e-22 110.9 56 92.9
Solyc00g500357.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 2.0e-22 110.9 56 92.9
CANSAT16G0008 Cannabis sativa HOM05D007877 ORTHO05D009957 5.8e-22 109.4 56 91.1
CARHR282940 Cardamine hirsuta HOM05D007877 ORTHO05D009957 5.8e-22 109.4 56 91.1
Gohir.A01G022475 Gossypium hirsutum HOM05D007877 ORTHO05D009957 5.8e-22 109.4 56 91.1
Peaxi162Scf00508g00001 Petunia axillaris HOM05D007877 ORTHO05D009957 7.6e-22 109.0 99 59.6
HanXRQChr00c0055g0571431 Helianthus annuus HOM05D007877 ORTHO05D009957 1.0e-21 108.6 56 91.1
HanXRQChr00c0234g0572751 Helianthus annuus HOM05D007877 ORTHO05D009957 1.0e-21 108.6 56 91.1
HanXRQMTg0579501 Helianthus annuus HOM05D007877 ORTHO05D009957 1.0e-21 108.6 56 91.1
ATMG00570 Arabidopsis thaliana HOM05D007877 ORTHO05D009957 4.9e-21 106.3 56 89.3
CsaV3_UNG208000 Cucumis sativus L. HOM05D007877 ORTHO05D009957 8.4e-21 105.5 56 89.3
RcHm_v2.0_MTg0499111 Rosa chinensis HOM05D007877 ORTHO05D009957 8.4e-21 105.5 55 89.1
Aa31csc239G30 Aethionema arabicum HOM05D007877 ORTHO05D009957 7.1e-20 102.4 56 87.5
C04p19590 Brassica napus HOM05D007877 ORTHO05D009957 1.2e-19 101.7 61 82.0
Zm00001eb436210 Zea mays HOM05D007877 ORTHO05D009957 1.2e-19 101.7 56 85.7
Zm00001eb436260 Zea mays HOM05D007877 ORTHO05D009957 1.2e-19 101.7 56 85.7
Zm00001eb436450 Zea mays HOM05D007877 ORTHO05D009957 1.2e-19 101.7 56 85.7
Zm00001eb436490 Zea mays HOM05D007877 ORTHO05D009957 1.2e-19 101.7 56 85.7
Zm00001eb441030 Zea mays HOM05D007877 ORTHO05D009957 1.2e-19 101.7 56 85.7
TPR.G17000 Trifolium pratense HOM05D007877 ORTHO05D009957 3.5e-19 100.1 56 85.7
HanXRQChr01g0007101 Helianthus annuus HOM05D007877 ORTHO05D009957 4.6e-19 99.8 56 82.1
MD15G1309600 Malus domestica HOM05D007877 ORTHO05D009957 7.9e-19 99.0 55 81.8
arahy.Tifrunner.gnm1.ann1.SK2G41 Arachis hypogaea HOM05D007877 ORTHO05D009957 1.0e-18 98.6 56 83.9
Lalb_Chr00c29g0408181 Lupinus albus HOM05D007877 ORTHO05D009957 1.3e-18 98.2 56 83.9
Lalb_Chr22g0358751 Lupinus albus HOM05D007877 ORTHO05D009957 1.3e-18 98.2 56 83.9
Phvul.005G124700 Phaseolus vulgaris HOM05D007877 ORTHO05D009957 1.3e-18 98.2 56 83.9
SHI55214 Sapria himalayana HOM05D007877 ORTHO05D009957 3.9e-18 96.7 56 80.4
Thhalv10015628m.g Eutrema salsugineum HOM05D007877 ORTHO05D009957 1.5e-17 94.7 56 83.9
Nitab4.5_0001761g0050 Nicotiana tabacum HOM05D008845 ORTHO05D011644 3.3e-17 93.6 50 94.0
Nitab4.5_0007251g0010 Nicotiana tabacum HOM05D008845 ORTHO05D011644 3.3e-17 93.6 50 94.0
Nitab4.5_0016007g0010 Nicotiana tabacum HOM05D008845 ORTHO05D011644 3.3e-17 93.6 50 94.0
Sopen00g001080 Solanum pennellii HOM05D008845 ORTHO05D011644 3.3e-17 93.6 50 94.0
Dinv06664 Davidia involucrata HOM05D008845 ORTHO05D011644 3.7e-16 90.1 47 97.9
Nitab4.5_0000351g0270 Nicotiana tabacum HOM05D008845 ORTHO05D011644 4.8e-16 89.7 48 95.8
Nitab4.5_0010586g0010 Nicotiana tabacum HOM05D008845 ORTHO05D011644 4.8e-16 89.7 87 57.5
Peaxi162Scf00348g00051 Petunia axillaris HOM05D008845 ORTHO05D011644 4.8e-16 89.7 50 92.0
Peaxi162Scf00566g00061 Petunia axillaris HOM05D008845 ORTHO05D011644 4.8e-16 89.7 50 92.0
Nitab4.5_0000206g0080 Nicotiana tabacum HOM05D008845 ORTHO05D011644 1.4e-15 88.2 50 90.0
Nitab4.5_0004300g0050 Nicotiana tabacum HOM05D008845 ORTHO05D011644 1.4e-15 88.2 50 88.0
Nitab4.5_0010333g0070 Nicotiana tabacum HOM05D008845 ORTHO05D011644 1.4e-15 88.2 50 90.0
Nitab4.5_0012599g0010 Nicotiana tabacum HOM05D008845 ORTHO05D011644 1.4e-15 88.2 50 90.0
CAN.G1.1 Capsicum annuum HOM05D008845 ORTHO05D011644 2.4e-15 87.4 50 86.0
Nitab4.5_0000010g0230 Nicotiana tabacum HOM05D007877 ORTHO05D009957 2.4e-15 87.4 53 81.1
Lsat_1_v5_gn_2_125060 Lactuca sativa HOM05D007877 ORTHO05D009957 1.2e-14 85.1 45 95.6
Lsat_1_v5_gn_9_49261 Lactuca sativa HOM05D007877 ORTHO05D009957 1.2e-14 85.1 45 95.6
Nitab4.5_0000866g0180 Nicotiana tabacum HOM05D008845 ORTHO05D011644 1.2e-14 85.1 50 86.0
PSO541G3164 Papaver somniferum HOM05D007877 ORTHO05D009957 1.2e-14 85.1 55 72.7
CAN.G1159.16 Capsicum annuum HOM05D007877 ORTHO05D009957 1.5e-14 84.7 45 95.6
Nitab4.5_0000172g1500 Nicotiana tabacum HOM05D008845 ORTHO05D011644 2.6e-14 84.0 47 89.4
PSO384G0556 Papaver somniferum HOM05D007877 ORTHO05D009957 4.5e-14 83.2 55 70.9
Solyc12g035750.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 5.9e-14 82.8 56 71.4
Dinv06680 Davidia involucrata HOM05D002660 ORTHO05D011644 1.3e-13 81.6 46 89.1
SEGI_25147 Sequoiadendron giganteum HOM05D007877 ORTHO05D009957 1.3e-13 81.6 60 68.3
BolC4t23493H Brassica oleracea HOM05D007877 ORTHO05D009957 2.9e-13 80.5 45 91.1
Nitab4.5_0000172g2240 Nicotiana tabacum HOM05D007877 ORTHO05D009957 5.0e-13 79.7 40 90.0
PSO133G0099 Papaver somniferum HOM05D007877 ORTHO05D009957 5.0e-13 79.7 55 69.1
SEGI_02417 Sequoiadendron giganteum HOM05D007877 ORTHO05D009957 5.0e-13 79.7 92 52.2
Nitab4.5_0013560g0020 Nicotiana tabacum HOM05D008845 ORTHO05D011644 1.4e-12 78.2 50 80.0
Solyc05g023970.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 4.2e-12 76.6 45 86.7
Nitab4.5_0003490g0030 Nicotiana tabacum HOM05D008845 ORTHO05D011644 1.6e-11 74.7 46 80.4
EL10Ac8g19721 Beta vulgaris HOM05D007877 ORTHO05D009957 4.6e-11 73.2 47 78.7
Nitab4.5_0002718g0090 Nicotiana tabacum HOM05D008845 ORTHO05D011644 3.0e-10 70.5 36 94.4
Solyc04g049250.1 Solanum lycopersicum HOM05D007877 ORTHO05D009957 3.0e-10 70.5 45 77.8
LjContig00315g0025322 Lotus japonicus HOM05D007877 ORTHO05D009957 1.1e-09 68.6 56 64.3
CARHR288300 Cardamine hirsuta HOM05D007877 ORTHO05D009957 1.5e-09 68.2 36 94.4
TAR371G0168 Trochodendron aralioides HOM05D007877 ORTHO05D009957 1.5e-09 68.2 36 94.4
Nitab4.5_0008535g0040 Nicotiana tabacum HOM05D008845 ORTHO05D011644 2.5e-09 67.4 34 97.1
Nitab4.5_0000117g0120 Nicotiana tabacum HOM05D008845 ORTHO05D011644 3.3e-09 67.0 38 92.1
BraSC177t45764Z Brassica rapa HOM05D007877 ORTHO05D009957 1.3e-08 65.1 36 91.7
BraSC48t46272Z Brassica rapa HOM05D007877 ORTHO05D009957 1.3e-08 65.1 36 91.7
Nitab4.5_0001034g0050 Nicotiana tabacum HOM05D008845 ORTHO05D016275 1.3e-08 65.1 70 57.1
Nitab4.5_0020764g0010 Nicotiana tabacum HOM05D008845 ORTHO05D011644 1.3e-08 65.1 32 96.9
Gorai.001G166700 Gossypium raimondii HOM05D007877 ORTHO05D009957 2.8e-08 63.9 34 91.2
Dinv06693 Davidia involucrata HOM05D023064 ORTHO05D016182 6.3e-08 62.8 35 85.7
Psat0s1774g0160 Pisum sativum HOM05D007877 ORTHO05D009957 6.3e-08 62.8 36 86.1
Nitab4.5_0000172g1930 Nicotiana tabacum HOM05D008845 ORTHO05D011644 8.2e-08 62.4 31 96.8
Sopen11g020270 Solanum pennellii HOM05D008845 ORTHO05D011644 8.2e-08 62.4 36 88.9
Aqoxy12s004 Aquilegia oxysepala HOM05D007877 ORTHO05D009957 3.4e-06 57.0 35 85.7
Aqoxy1G02979 Aquilegia oxysepala HOM05D007877 ORTHO05D009957 3.4e-06 57.0 35 85.7
Aqoxy38s004 Aquilegia oxysepala HOM05D007877 ORTHO05D009957 3.4e-06 57.0 35 85.7


User provided reference genes

Program Settings