Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G628.68 Capsicum annuum HOM05D009844 ORTHO05D007252 4.5e-180 634.4 310 100.0
CAN.G1076.9 Capsicum annuum HOM05D009844 ORTHO05D007252 2.5e-69 266.5 188 70.7
PGSC0003DMG400021626 Solanum tuberosum HOM05D009844 ORTHO05D007252 2.3e-51 206.8 188 60.1
Sopen09g036270 Solanum pennellii HOM05D009844 ORTHO05D007252 1.5e-50 204.1 197 55.8
Solyc09g098350.4 Solanum lycopersicum HOM05D009844 ORTHO05D007252 2.0e-50 203.8 203 55.7
Peaxi162Scf00618g10023 Petunia axillaris HOM05D009844 ORTHO05D007252 3.7e-49 199.5 196 54.1
Peaxi162Scf00783g00335 Petunia axillaris HOM05D009844 ORTHO05D007252 6.4e-49 198.7 192 52.6
Peaxi162Scf00185g00710 Petunia axillaris HOM05D009844 ORTHO05D007252 1.0e-46 191.4 187 55.1
Peaxi162Scf00129g01225 Petunia axillaris HOM05D009844 ORTHO05D007252 5.0e-46 189.1 172 58.1
Sopen09g035440 Solanum pennellii HOM05D009844 ORTHO05D007252 1.8e-43 180.6 193 50.3
PGSC0003DMG400036554 Solanum tuberosum HOM05D009844 ORTHO05D007252 1.8e-43 180.6 189 49.2
Solyc09g092540.1 Solanum lycopersicum HOM05D009844 ORTHO05D007252 1.5e-42 177.6 193 49.7
Peaxi162Scf00185g00820 Petunia axillaris HOM05D009844 ORTHO05D007252 3.4e-42 176.4 173 53.8
CAN.G1325.7 Capsicum annuum HOM05D009844 ORTHO05D007252 5.6e-29 132.5 152 49.3
Solyc08g013807.1 Solanum lycopersicum HOM05D009844 ORTHO05D007252 4.7e-28 129.4 132 51.5
Nitab4.5_0000697g0050 Nicotiana tabacum HOM05D009844 ORTHO05D007252 6.2e-20 102.4 102 54.9
Peaxi162Scf00783g00227 Petunia axillaris HOM05D009844 ORTHO05D007252 3.4e-18 96.7 105 52.4
Rhsim07G0245000 Rhododendron simsii HOM05D001026 ORTHO05D007252 1.0e-14 85.1 167 34.1
Rhsim03G0268000 Rhododendron simsii HOM05D000007 ORTHO05D007252 2.3e-14 84.0 167 34.1
Ciclev10033438m.g Citrus clementina HOM05D000007 ORTHO05D007252 5.1e-14 82.8 173 33.5
Dinv21217 Davidia involucrata HOM05D000007 ORTHO05D007252 7.3e-13 79.0 170 32.4
Actinidia38511 Actinidia chinensis HOM05D000007 ORTHO05D007252 1.6e-12 77.8 167 33.5
Dinv18626 Davidia involucrata HOM05D009844 ORTHO05D007252 1.1e-11 75.1 165 32.1
Dinv26242 Davidia involucrata HOM05D009844 ORTHO05D007252 1.1e-11 75.1 165 32.1
Oeu044692.1 Olea europaea HOM05D000007 ORTHO05D007252 1.4e-11 74.7 153 33.3
Hma1.2p1_0022F.1_g014760 Hydrangea macrophylla HOM05D000007 ORTHO05D007252 9.0e-11 72.0 123 38.2
COL.COLO4_10484 Corchorus olitorius HOM05D013022 ORTHO05D007252 1.5e-10 71.2 142 33.1
Migut.J00822 Erythranthe guttata HOM05D000007 ORTHO05D007252 1.5e-10 71.2 132 33.3
Nitab4.5_0007469g0010 Nicotiana tabacum HOM05D000007 ORTHO05D007252 1.5e-10 71.2 152 36.2
Lsat_1_v5_gn_4_143560 Lactuca sativa HOM05D000007 ORTHO05D000017 4.5e-10 69.7 163 28.8
Oeu056889.1 Olea europaea HOM05D000007 ORTHO05D007252 5.8e-10 69.3 166 30.1
TAR624G0698 Trochodendron aralioides HOM05D000007 ORTHO05D003666 5.8e-10 69.3 179 28.5
Nitab4.5_0000157g0100 Nicotiana tabacum HOM05D000007 ORTHO05D007252 1.3e-09 68.2 145 31.7
SGA_v2.0_scaffold31G12737 Striga asiatica HOM05D000007 ORTHO05D007252 1.7e-09 67.8 135 32.6
Nitab4.5_0000157g0070 Nicotiana tabacum HOM05D000007 ORTHO05D007252 2.2e-09 67.4 145 35.2
MBI19_g35552_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000017 3.8e-09 66.6 138 31.2
TAR371G1225 Trochodendron aralioides HOM05D000007 ORTHO05D007252 3.8e-09 66.6 135 31.9
Peaxi162Scf00324g00083 Petunia axillaris HOM05D013374 ORTHO05D013933 4.9e-09 66.2 183 29.5
PGSC0003DMG400008522 Solanum tuberosum HOM05D013374 ORTHO05D013933 4.9e-09 66.2 142 33.1
TAR369G0473 Trochodendron aralioides HOM05D000007 ORTHO05D001644 6.4e-09 65.9 126 35.7
Peaxi162Scf01024g00012 Petunia axillaris HOM05D009844 ORTHO05D007252 1.1e-08 65.1 75 40.0
Hma1.2p1_0084F.1_g043690 Hydrangea macrophylla HOM05D000007 ORTHO05D007252 1.4e-08 64.7 185 30.3
Dinv26455 Davidia involucrata HOM05D000007 ORTHO05D013933 4.2e-08 63.2 126 34.9
Oeu014895.1 Olea europaea HOM05D000007 ORTHO05D007252 4.2e-08 63.2 126 36.5
PGSC0003DMG400008507 Solanum tuberosum HOM05D000007 ORTHO05D007252 4.2e-08 63.2 145 30.3
Actinidia38508 Actinidia chinensis HOM05D000007 ORTHO05D013933 5.4e-08 62.8 183 24.6
CSS0034833 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D003666 9.3e-08 62.0 170 27.1
CSS0040592 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D003666 1.2e-07 61.6 116 31.0
Nitab4.5_0003546g0050 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.2e-07 61.6 191 26.7
Dinv26480 Davidia involucrata HOM05D009844 ORTHO05D007252 2.1e-07 60.8 185 27.0
Nitab4.5_0003898g0010 Nicotiana tabacum HOM05D000007 ORTHO05D007252 2.1e-07 60.8 135 31.1
Nitab4.5_0000762g0110 Nicotiana tabacum HOM05D013374 ORTHO05D013933 2.7e-07 60.5 172 27.9
Migut.J01047 Erythranthe guttata HOM05D000007 ORTHO05D007252 4.6e-07 59.7 159 28.3
TAR375G0745 Trochodendron aralioides HOM05D000007 ORTHO05D007252 6.0e-07 59.3 126 33.3
MBI19_g26732_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 1.0e-06 58.5 218 24.3
ECA232G4348 Erigeron canadensis HOM05D000007 ORTHO05D000017 1.8e-06 57.8 151 27.8
MSTRG.5952 Avicennia marina HOM05D000007 ORTHO05D007252 3.0e-06 57.0 102 34.3
Nitab4.5_0008073g0040 Nicotiana tabacum HOM05D009844 ORTHO05D007252 3.9e-06 56.6 62 46.8
CSS0013400 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 6.7e-06 55.8 113 29.2
CSS0022094 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000521 6.7e-06 55.8 113 29.2


User provided reference genes

Program Settings