Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G628.60 Capsicum annuum HOM05D009197 ORTHO05D010857 8.3e-70 266.9 136 100.0
Solyc06g071220.1 Solanum lycopersicum HOM05D009197 ORTHO05D010857 1.6e-60 236.1 135 88.1
Sopen06g027530 Solanum pennellii HOM05D009197 ORTHO05D010857 1.3e-59 233.0 135 86.7
PGSC0003DMG400033096 Solanum tuberosum HOM05D009197 ORTHO05D010857 6.2e-49 197.6 121 83.5
Nitab4.5_0000003g0200 Nicotiana tabacum HOM05D009197 ORTHO05D010857 6.0e-44 181.0 139 70.5
Nitab4.5_0000758g0060 Nicotiana tabacum HOM05D009197 ORTHO05D010857 1.8e-43 179.5 138 69.6
Peaxi162Scf00689g00559 Petunia axillaris HOM05D000207 ORTHO05D002370 5.5e-37 157.9 139 61.9
Actinidia04946 Actinidia chinensis HOM05D004313 ORTHO05D005036 1.0e-30 137.1 140 52.9
CSS0015959 Camellia sinensis var. sinensis HOM05D009197 ORTHO05D010857 3.9e-27 125.2 139 51.1
Potri.015G068800 Populus trichocarpa HOM05D009197 ORTHO05D010857 9.0e-24 114.0 133 45.9
Sabra15G0093200 Salix brachista HOM05D009197 ORTHO05D010857 1.3e-22 110.2 143 48.3
Potri.012G073800 Populus trichocarpa HOM05D009197 ORTHO05D010857 3.8e-22 108.6 139 46.0
CSS0023152 Camellia sinensis var. sinensis HOM05D009197 ORTHO05D010857 1.1e-21 107.1 130 46.2
Atru.chr9.2375 Acer truncatum HOM05D009197 ORTHO05D010857 1.2e-20 103.6 131 43.5
Thecc.03G071400 Theobroma cacao HOM05D009197 ORTHO05D010857 6.1e-20 101.3 132 47.0
Gohir.D11G031200 Gossypium hirsutum HOM05D009197 ORTHO05D010857 7.9e-20 100.9 129 45.0
Gorai.007G034100 Gossypium raimondii HOM05D009197 ORTHO05D010857 1.0e-19 100.5 129 45.0
Dinv07989 Davidia involucrata HOM05D009197 ORTHO05D010857 1.8e-19 99.8 124 51.6
Aqoxy3G03174 Aquilegia oxysepala HOM05D009197 ORTHO05D010857 1.1e-18 97.1 137 41.6
Gohir.A11G028000 Gossypium hirsutum HOM05D009197 ORTHO05D010857 1.1e-18 97.1 129 45.7
Rhsim08G0163700 Rhododendron simsii HOM05D009197 ORTHO05D010857 3.3e-18 95.5 128 46.1
Manes.14G072000 Manihot esculenta HOM05D009197 ORTHO05D010857 7.4e-18 94.4 145 46.2
Ciclev10022789m.g Citrus clementina HOM05D009197 ORTHO05D010857 8.2e-17 90.9 135 37.8
Haze_07407 Corylus avellana HOM05D009197 ORTHO05D010857 2.0e-15 86.3 132 42.4
Haze_07415 Corylus avellana HOM05D000207 ORTHO05D002370 2.0e-15 86.3 132 42.4
COL.COLO4_07631 Corchorus olitorius HOM05D009197 ORTHO05D010857 2.2e-14 82.8 131 40.5
QL03p067559 Quercus lobata HOM05D009197 ORTHO05D010857 2.2e-14 82.8 110 40.9
QL03p067585 Quercus lobata HOM05D009197 ORTHO05D010857 1.6e-12 76.6 110 41.8
Cfa019040 Carpinus fangiana HOM05D009197 ORTHO05D010857 2.1e-12 76.3 120 43.3
Nn4g22968 Nelumbo nucifera HOM05D009197 ORTHO05D010857 6.1e-12 74.7 138 39.1
QL10p013987 Quercus lobata HOM05D009197 ORTHO05D010857 5.1e-11 71.6 110 44.5
Gohir.D03G089850 Gossypium hirsutum HOM05D009197 ORTHO05D010857 1.3e-09 67.0 131 36.6
Sed0012922 Sechium edule HOM05D022550 ORTHO05D025091 8.2e-09 64.3 138 37.7
Medtr4g107270 Medicago truncatula HOM05D013104 ORTHO05D010857 1.4e-08 63.5 126 36.5
Phvul.003G195600 Phaseolus vulgaris HOM05D013104 ORTHO05D010857 1.8e-08 63.2 122 38.5
TPR.G38456 Trifolium pratense HOM05D013104 ORTHO05D010857 3.1e-08 62.4 134 38.1
TAR371G0864 Trochodendron aralioides HOM05D009197 ORTHO05D010857 3.1e-08 62.4 141 36.2
Lj4g0014795 Lotus japonicus HOM05D013104 ORTHO05D010857 5.3e-08 61.6 130 37.7
Migut.E00128 Erythranthe guttata HOM05D041172 ORTHO05D035185 9.1e-08 60.8 128 37.5
ClCG01G014220 Citrullus lanatus HOM05D022550 ORTHO05D025091 7.7e-07 57.8 149 34.9
Sc04g0008740 Simmondsia chinensis HOM05D017674 ORTHO05D019531 1.0e-06 57.4 173 31.8
arahy.Tifrunner.gnm1.ann1.ABZM2I Arachis hypogaea HOM05D013104 ORTHO05D010857 1.7e-06 56.6 149 32.9
Glyma.05G032100 Glycine max HOM05D013104 ORTHO05D010857 2.2e-06 56.2 126 38.1
MELO3C002227.2 Cucumis melo HOM05D022550 ORTHO05D025091 2.9e-06 55.8 149 35.6
Glyma.17G094600 Glycine max HOM05D013104 ORTHO05D010857 3.8e-06 55.5 126 36.5
Nitab4.5_0011499g0020 Nicotiana tabacum HOM05D041172 ORTHO05D035185 3.8e-06 55.5 132 35.6
Psat4g054920 Pisum sativum HOM05D013104 ORTHO05D010857 3.8e-06 55.5 134 34.3
Hund05938 Selenicereus undatus HOM05D017674 ORTHO05D019531 5.0e-06 55.1 170 30.6
Manes.01G193900 Manihot esculenta HOM05D009197 ORTHO05D250507 6.5e-06 54.7 122 31.1


User provided reference genes

Program Settings