Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G625.3 Capsicum annuum HOM05D003845 ORTHO05D004161 3.5e-92 341.7 177 100.0
Sopen02g030490 Solanum pennellii HOM05D003845 ORTHO05D004161 3.5e-76 288.5 160 93.8
Solyc02g085810.3 Solanum lycopersicum HOM05D003845 ORTHO05D004161 4.5e-76 288.1 160 93.1
Nitab4.5_0001569g0050 Nicotiana tabacum HOM05D003845 ORTHO05D004161 1.0e-75 287.0 160 93.8
Nitab4.5_0002288g0020 Nicotiana tabacum HOM05D003845 ORTHO05D004161 1.0e-75 287.0 160 93.8
Cc07_g08900 Coffea canephora HOM05D003845 ORTHO05D004161 4.1e-69 265.0 160 85.0
Oeu052985.1 Olea europaea HOM05D003845 ORTHO05D004161 4.1e-69 265.0 160 85.0
Actinidia36313 Actinidia chinensis HOM05D003845 ORTHO05D004161 1.2e-68 263.5 160 84.4
Dinv33933 Davidia involucrata HOM05D003845 ORTHO05D004161 1.2e-68 263.5 160 84.4
Hma1.2p1_0136F.1_g062170 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 1.2e-68 263.5 160 84.4
Hma1.2p1_0136F.1_g062180 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 1.2e-68 263.5 160 84.4
vmacro05567 Vaccinium macrocarpon HOM05D003845 ORTHO05D004161 1.2e-68 263.5 160 85.0
CSS0012709 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 4.6e-68 261.5 160 84.4
CSS0018407 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 4.6e-68 261.5 160 84.4
Manes.02G067500 Manihot esculenta HOM05D003845 ORTHO05D004161 4.6e-68 261.5 160 83.1
CiPaw.04G040900 Carya illinoinensis HOM05D003845 ORTHO05D004161 6.0e-68 261.2 160 83.1
Thecc.04G136100 Theobroma cacao HOM05D003845 ORTHO05D004161 1.0e-67 260.4 158 83.5
PGR004G1392 Punica granatum HOM05D003845 ORTHO05D004161 1.3e-67 260.0 160 81.2
Duzib133G1200 Durio zibethinus HOM05D003845 ORTHO05D004161 5.0e-67 258.1 158 83.5
Ciclev10011943m.g Citrus clementina HOM05D003845 ORTHO05D004161 8.6e-67 257.3 160 80.6
Eucgr.F02484 Eucalyptus grandis HOM05D003845 ORTHO05D004161 1.9e-66 256.1 160 81.9
Atru.chr8.887 Acer truncatum HOM05D003845 ORTHO05D004161 2.5e-66 255.8 160 80.0
A07p33800 Brassica napus HOM05D003845 ORTHO05D004161 2.5e-66 255.8 160 80.6
C06p43130 Brassica napus HOM05D003845 ORTHO05D004161 2.5e-66 255.8 160 80.6
BolC6t39126H Brassica oleracea HOM05D003845 ORTHO05D004161 2.5e-66 255.8 160 80.6
BraA07t31006Z Brassica rapa HOM05D003845 ORTHO05D004161 2.5e-66 255.8 160 80.6
Thhalv10017993m.g Eutrema salsugineum HOM05D003845 ORTHO05D004161 2.5e-66 255.8 160 81.2
Migut.H00208 Erythranthe guttata HOM05D003845 ORTHO05D004161 4.3e-66 255.0 160 82.5
Gohir.A07G071701 Gossypium hirsutum HOM05D003845 ORTHO05D004161 4.3e-66 255.0 156 82.7
Gorai.001G080300 Gossypium raimondii HOM05D003845 ORTHO05D004161 4.3e-66 255.0 156 82.7
Sp5g22090 Schrenkiella parvula HOM05D003845 ORTHO05D004161 4.3e-66 255.0 160 81.2
RcHm_v2.0_Chr2g0162941 Rosa chinensis HOM05D003845 ORTHO05D004161 7.3e-66 254.2 161 81.4
GSVIVG01031064001 Vitis vinifera HOM05D003845 ORTHO05D004161 7.3e-66 254.2 160 81.2
Aa31LG2G3530 Aethionema arabicum HOM05D003845 ORTHO05D004161 1.2e-65 253.4 160 80.0
MD14G1001900 Malus domestica HOM05D003845 ORTHO05D004161 2.1e-65 252.7 161 80.7
TWI53G0876 Tripterygium wilfordii HOM05D003845 ORTHO05D004161 2.1e-65 252.7 160 81.2
Lj2C445T15 Lonicera japonica HOM05D003845 ORTHO05D004161 3.6e-65 251.9 161 82.0
Sc23g0006880 Simmondsia chinensis HOM05D003845 ORTHO05D004161 3.6e-65 251.9 158 83.5
AT1G67140 Arabidopsis thaliana HOM05D003845 ORTHO05D004161 4.7e-65 251.5 160 78.1
Gohir.D07G076100 Gossypium hirsutum HOM05D003845 ORTHO05D004161 4.7e-65 251.5 156 82.1
AL2G25520 Arabidopsis lyrata HOM05D003845 ORTHO05D004161 6.2e-65 251.1 160 78.8
MD12G1002400 Malus domestica HOM05D003845 ORTHO05D004161 8.0e-65 250.8 161 79.5
Hund16134 Selenicereus undatus HOM05D003845 ORTHO05D004161 8.0e-65 250.8 158 80.4
Carub.0002s1343 Capsella rubella HOM05D003845 ORTHO05D004161 1.1e-64 250.4 160 79.4
Lj1g0009000 Lotus japonicus HOM05D003845 ORTHO05D004161 2.3e-64 249.2 150 83.3
Sed0012635 Sechium edule HOM05D003845 ORTHO05D004161 2.3e-64 249.2 160 78.8
MELO3C022095.2 Cucumis melo HOM05D003845 ORTHO05D004161 3.1e-64 248.8 160 77.5
CsaV3_5G039200 Cucumis sativus L. HOM05D003845 ORTHO05D004161 4.0e-64 248.4 160 78.1
Prupe.7G002300 Prunus persica HOM05D003845 ORTHO05D004161 5.2e-64 248.1 160 78.1
THA.LOC104805559 Tarenaya hassleriana HOM05D003845 ORTHO05D004161 6.8e-64 247.7 160 78.1
Aqoxy3G03940 Aquilegia oxysepala HOM05D003845 ORTHO05D004161 8.9e-64 247.3 161 78.9
CANSAT64G2814 Cannabis sativa HOM05D003845 ORTHO05D004161 8.9e-64 247.3 160 78.1
FvH4_6g45230 Fragaria vesca HOM05D003845 ORTHO05D004161 1.2e-63 246.9 162 80.2
FAN02G2813 Fragaria x ananassa HOM05D003845 ORTHO05D004161 1.2e-63 246.9 162 80.2
FAN14G4373 Fragaria x ananassa HOM05D003845 ORTHO05D004161 1.2e-63 246.9 162 80.2
PSO063G7466 Papaver somniferum HOM05D003845 ORTHO05D004161 1.2e-63 246.9 160 79.4
Phvul.008G004700 Phaseolus vulgaris HOM05D003845 ORTHO05D004161 1.2e-63 246.9 150 82.0
SGA_v2.0_scaffold33G13453 Striga asiatica HOM05D003845 ORTHO05D004161 1.2e-63 246.9 160 79.4
arahy.Tifrunner.gnm1.ann1.4V7WUF Arachis hypogaea HOM05D003845 ORTHO05D004161 1.5e-63 246.5 153 80.4
arahy.Tifrunner.gnm1.ann1.UJVA95 Arachis hypogaea HOM05D003845 ORTHO05D004161 1.5e-63 246.5 153 80.4
VMungo1383G2489 Vigna mungo HOM05D003845 ORTHO05D004161 1.5e-63 246.5 162 77.8
ECA232G1957 Erigeron canadensis HOM05D003845 ORTHO05D004161 2.6e-63 245.7 160 77.5
HanXRQChr14g0438731 Helianthus annuus HOM05D003845 ORTHO05D004161 3.4e-63 245.4 160 78.1
Lsat_1_v5_gn_4_153700 Lactuca sativa HOM05D003845 ORTHO05D004161 9.8e-63 243.8 160 77.5
PSO782G1231 Papaver somniferum HOM05D003845 ORTHO05D004161 1.3e-62 243.4 160 78.1
TAR629G0674 Trochodendron aralioides HOM05D003845 ORTHO05D004161 2.2e-62 242.7 160 78.8
Ca_03194_v3 Cicer arietinum L. HOM05D003845 ORTHO05D003700 2.9e-62 242.3 150 79.3
Potri.004G101250 Populus trichocarpa HOM05D003845 ORTHO05D004161 2.9e-62 242.3 160 77.5
Medtr7g406950 Medicago truncatula HOM05D003845 ORTHO05D004161 4.9e-62 241.5 150 80.0
Lalb_Chr21g0317871 Lupinus albus HOM05D003845 ORTHO05D004161 6.4e-62 241.1 167 74.9
Glyma.18G297900 Glycine max HOM05D003845 ORTHO05D004161 8.3e-62 240.7 150 81.3
Nn4g23790 Nelumbo nucifera HOM05D003845 ORTHO05D004161 9.2e-61 237.3 160 75.6
EL10Ac2g04592 Beta vulgaris HOM05D003845 ORTHO05D004161 2.7e-60 235.7 162 75.9
AUR62014525 Chenopodium quinoa HOM05D003845 ORTHO05D004161 3.5e-60 235.3 162 73.5
SalBow3G0178 Salvia bowleyana HOM05D003845 ORTHO05D004161 6.0e-60 234.6 177 71.2
unitig_899.g14510 Utricularia gibba HOM05D003845 ORTHO05D004161 3.3e-58 228.8 160 75.0
SHI17842 Sapria himalayana HOM05D003845 ORTHO05D004161 8.3e-54 214.2 160 69.4
ATR0564G289 Amborella trichopoda HOM05D003845 ORTHO05D004161 3.5e-52 208.8 150 70.7
CDE02G4394 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 3.0e-51 205.7 157 65.6
HPP92_003934 Vanilla planifolia HOM05D003845 ORTHO05D004161 6.6e-51 204.5 160 65.6
HPP92_003935 Vanilla planifolia HOM05D003845 ORTHO05D004161 6.6e-51 204.5 160 65.6
SEGI_40473 Sequoiadendron giganteum HOM05D003845 ORTHO05D004161 5.6e-50 201.4 162 62.3
Zm00001eb382690 Zea mays HOM05D003845 ORTHO05D004161 2.8e-49 199.1 153 67.3
QL02p051676 Quercus lobata HOM05D003845 ORTHO05D004161 3.6e-49 198.7 125 83.2
Cpa.g.sc179.9 Carica papaya HOM05D003845 ORTHO05D004161 4.7e-49 198.4 129 77.5
Dinv34837 Davidia involucrata HOM05D003845 ORTHO05D004161 1.8e-48 196.4 126 81.0
Peaxi162Scf00814g00242 Petunia axillaris HOM05D003845 ORTHO05D004161 6.8e-48 194.5 105 95.2
Mapoly0101s0033 Marchantia polymorpha HOM05D003845 ORTHO05D004161 3.4e-47 192.2 152 64.5
Actinidia15875 Actinidia chinensis HOM05D003845 ORTHO05D004161 1.2e-44 183.7 119 80.7
AUR62008978 Chenopodium quinoa HOM05D003845 ORTHO05D004161 3.5e-44 182.2 126 76.2
Ah.10g037590 Amaranthus hybridus HOM05D003845 ORTHO05D004161 6.0e-44 181.4 155 65.8
Pp3c15_3000 Physcomitrium patens HOM05D003845 ORTHO05D004161 1.9e-42 176.4 165 60.0
SMO239G0031 Selaginella moellendorffii HOM05D003845 ORTHO05D004161 9.6e-42 174.1 163 56.4
ClCG11G005430 Citrullus lanatus HOM05D003845 ORTHO05D004161 3.1e-40 169.1 106 77.4
AagrBONN_evm.TU.Sc2ySwM_368.2329__2330 Anthoceros agrestis HOM05D003845 ORTHO05D004161 3.3e-34 149.1 131 60.3
CBR_g31193 Chara braunii HOM05D003845 ORTHO05D004161 1.2e-31 140.6 150 48.7
Os06g0505302 Oryza sativa ssp. japonica HOM05D003845 ORTHO05D004161 5.7e-18 95.1 72 59.7
COL.COLO4_16180 Corchorus olitorius HOM05D003845 ORTHO05D004161 1.5e-15 87.0 53 81.1
Actinidia17345 Actinidia chinensis HOM05D003845 ORTHO05D004161 2.2e-14 83.2 54 75.9
Actinidia17348 Actinidia chinensis HOM05D003226 ORTHO05D015784 2.2e-14 83.2 54 75.9
arahy.Tifrunner.gnm1.ann1.57NG5G Arachis hypogaea HOM05D003845 ORTHO05D004161 1.4e-13 80.5 72 63.9
arahy.Tifrunner.gnm1.ann1.395ZIT Arachis hypogaea HOM05D003845 ORTHO05D004161 9.3e-13 77.8 58 69.0
Cre16.g684100 Chlamydomonas reinhardtii HOM05D003845 ORTHO05D004161 2.1e-12 76.6 151 31.1
QL02p051715 Quercus lobata HOM05D003845 ORTHO05D004161 2.4e-08 63.2 66 47.0
ClCG11G005420 Citrullus lanatus HOM05D003845 ORTHO05D004161 3.1e-08 62.8 50 68.0
arahy.Tifrunner.gnm1.ann1.MNN8Y6 Arachis hypogaea HOM05D003845 ORTHO05D004161 1.2e-07 60.8 63 57.1
Rhsim09G0080700 Rhododendron simsii HOM05D003845 ORTHO05D004161 5.0e-06 55.5 36 77.8


User provided reference genes

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