Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G624.23 Capsicum annuum HOM05D007059 ORTHO05D009155 4.5e-129 464.5 223 100.0
Sopen04g004490 Solanum pennellii HOM05D007059 ORTHO05D009155 2.5e-119 432.2 224 93.3
PGSC0003DMG400032539 Solanum tuberosum HOM05D007059 ORTHO05D009155 7.2e-119 430.6 224 94.2
Solyc04g009370.4 Solanum lycopersicum HOM05D007059 ORTHO05D009155 1.2e-118 429.9 224 92.9
Nitab4.5_0007261g0020 Nicotiana tabacum HOM05D007059 ORTHO05D009155 1.9e-116 422.5 223 91.0
Nitab4.5_0002113g0150 Nicotiana tabacum HOM05D007059 ORTHO05D009155 2.8e-115 418.7 223 91.0
Peaxi162Scf01172g00004 Petunia axillaris HOM05D007059 ORTHO05D009155 1.8e-106 389.4 226 84.1
CSS0038027 Camellia sinensis var. sinensis HOM05D007059 ORTHO05D009155 1.5e-76 290.0 227 69.6
CiPaw.05G167400 Carya illinoinensis HOM05D007059 ORTHO05D009155 3.7e-75 285.4 228 66.2
TAR629G1440 Trochodendron aralioides HOM05D007059 ORTHO05D009155 6.3e-75 284.6 227 67.0
Rhsim04G0168700 Rhododendron simsii HOM05D007059 ORTHO05D009155 2.4e-74 282.7 224 66.5
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 4.1e-74 282.0 228 65.8
Lj3A851T65 Lonicera japonica HOM05D007059 ORTHO05D009155 5.4e-74 281.6 247 63.2
Actinidia38411 Actinidia chinensis HOM05D007059 ORTHO05D009155 2.0e-73 279.6 224 65.2
GSVIVG01010187001 Vitis vinifera HOM05D007059 ORTHO05D009155 5.9e-73 278.1 184 75.5
Thecc.02G295400 Theobroma cacao HOM05D007059 ORTHO05D009155 1.0e-72 277.3 234 63.7
Ciclev10033522m.g Citrus clementina HOM05D007059 ORTHO05D009155 3.8e-72 275.4 230 67.4
PSO063G1277 Papaver somniferum HOM05D007059 ORTHO05D009155 3.8e-72 275.4 234 62.8
Atru.chr11.1222 Acer truncatum HOM05D007059 ORTHO05D009155 5.0e-72 275.0 228 64.0
COL.COLO4_16620 Corchorus olitorius HOM05D007059 ORTHO05D009155 1.1e-71 273.9 234 62.8
ECA234G4546 Erigeron canadensis HOM05D007059 ORTHO05D009155 4.3e-71 271.9 217 66.8
Potri.010G169700 Populus trichocarpa HOM05D007059 ORTHO05D009155 4.3e-71 271.9 176 76.7
PSO782G1004 Papaver somniferum HOM05D007059 ORTHO05D009155 5.6e-71 271.6 234 62.0
vmacro08590 Vaccinium macrocarpon HOM05D007059 ORTHO05D009155 7.3e-71 271.2 224 62.9
Sabra10G0129500 Salix brachista HOM05D007059 ORTHO05D009155 9.5e-71 270.8 176 76.1
RcHm_v2.0_Chr4g0446371 Rosa chinensis HOM05D007059 ORTHO05D009155 6.1e-70 268.1 187 72.7
Prupe.1G344600 Prunus persica HOM05D007059 ORTHO05D009155 1.0e-69 267.3 173 78.0
MD16G1006000 Malus domestica HOM05D007059 ORTHO05D009155 3.0e-69 265.8 187 74.3
MBI06_g22349_MAGBIO Magnolia biondii HOM05D007059 ORTHO05D009155 4.0e-69 265.4 226 61.9
Nn4g24915 Nelumbo nucifera HOM05D007059 ORTHO05D009155 4.0e-69 265.4 162 80.9
MSTRG.2053 Avicennia marina HOM05D007059 ORTHO05D009155 5.2e-69 265.0 228 61.0
Phvul.011G032300 Phaseolus vulgaris HOM05D007059 ORTHO05D009155 5.2e-69 265.0 166 81.3
Glyma.12G029100 Glycine max HOM05D007059 ORTHO05D009155 2.6e-68 262.7 168 75.0
Glyma.11G104100 Glycine max HOM05D007059 ORTHO05D009155 3.4e-68 262.3 168 75.6
Cc11_g00200 Coffea canephora HOM05D007059 ORTHO05D009155 7.5e-68 261.2 228 62.7
VMungo1127G1389 Vigna mungo HOM05D007059 ORTHO05D009155 1.3e-67 260.4 168 78.6
FvH4_4g36660 Fragaria vesca HOM05D007059 ORTHO05D009155 2.2e-67 259.6 187 70.6
FAN12G0665 Fragaria x ananassa HOM05D007059 ORTHO05D009155 2.2e-67 259.6 187 70.6
TPR.G21564 Trifolium pratense HOM05D007059 ORTHO05D009155 2.2e-67 259.6 188 70.7
Manes.16G044801 Manihot esculenta HOM05D007059 ORTHO05D009155 4.9e-67 258.5 175 77.1
Lj3g0001367 Lotus japonicus HOM05D007059 ORTHO05D009155 6.4e-67 258.1 177 73.4
Psat7g174240 Pisum sativum HOM05D007059 ORTHO05D009155 1.8e-66 256.5 185 69.7
Eucgr.G02016 Eucalyptus grandis HOM05D007059 ORTHO05D009155 2.4e-66 256.1 226 60.6
FAN07G2854 Fragaria x ananassa HOM05D007059 ORTHO05D009155 2.4e-66 256.1 187 70.1
HanXRQChr01g0028541 Helianthus annuus HOM05D007059 ORTHO05D009155 4.1e-66 255.4 221 64.3
Sc10g0008670 Simmondsia chinensis HOM05D007059 ORTHO05D009155 4.1e-66 255.4 229 60.3
Ca_03042_v3 Cicer arietinum L. HOM05D007059 ORTHO05D009155 5.4e-66 255.0 186 69.9
Gorai.002G167400 Gossypium raimondii HOM05D007059 ORTHO05D009155 5.4e-66 255.0 225 62.7
Lalb_Chr01g0001591 Lupinus albus HOM05D007059 ORTHO05D009155 1.6e-65 253.4 174 73.0
Lsat_1_v5_gn_4_26421 Lactuca sativa HOM05D007059 ORTHO05D009155 2.7e-65 252.7 217 64.1
MELO3C020030.2 Cucumis melo HOM05D007059 ORTHO05D009155 4.6e-65 251.9 173 71.7
Migut.E00704 Erythranthe guttata HOM05D007059 ORTHO05D009155 4.6e-65 251.9 226 60.2
ClCG11G001160 Citrullus lanatus HOM05D007059 ORTHO05D009155 5.9e-65 251.5 216 60.2
Gohir.A01G145900 Gossypium hirsutum HOM05D007059 ORTHO05D009155 5.9e-65 251.5 236 60.2
Gohir.D01G138500 Gossypium hirsutum HOM05D007059 ORTHO05D009155 7.8e-65 251.1 225 62.2
CARHR095430 Cardamine hirsuta HOM05D007059 ORTHO05D009155 3.0e-64 249.2 197 64.0
Sp3g17910 Schrenkiella parvula HOM05D007059 ORTHO05D009155 1.5e-63 246.9 218 61.0
BcaC09g48947 Brassica carinata HOM05D007059 ORTHO05D009155 1.9e-63 246.5 173 69.4
C01p44250 Brassica napus HOM05D007059 ORTHO05D009155 1.9e-63 246.5 173 69.4
BolC1t04385H Brassica oleracea HOM05D007059 ORTHO05D009155 1.9e-63 246.5 173 69.4
Medtr4g074210 Medicago truncatula HOM05D007059 ORTHO05D009155 1.9e-63 246.5 190 68.9
Aqoxy3G04246 Aquilegia oxysepala HOM05D007059 ORTHO05D009155 4.3e-63 245.4 181 70.2
CANSAT35G1437 Cannabis sativa HOM05D007059 ORTHO05D009155 7.3e-63 244.6 144 84.0
arahy.Tifrunner.gnm1.ann1.NRJ0Q8 Arachis hypogaea HOM05D007059 ORTHO05D009155 9.5e-63 244.2 168 73.8
arahy.Tifrunner.gnm1.ann1.PC0HA4 Arachis hypogaea HOM05D007059 ORTHO05D009155 9.5e-63 244.2 168 73.8
Sed0015909 Sechium edule HOM05D007059 ORTHO05D009155 1.2e-62 243.8 156 78.2
unitig_27.g25281 Utricularia gibba HOM05D007059 ORTHO05D009155 1.6e-62 243.4 196 64.8
AL3G33460 Arabidopsis lyrata HOM05D007059 ORTHO05D009155 2.8e-62 242.7 198 63.1
Carub.0003s1980 Capsella rubella HOM05D007059 ORTHO05D009155 2.8e-62 242.7 200 63.5
Thhalv10021482m.g Eutrema salsugineum HOM05D007059 ORTHO05D009155 3.6e-62 242.3 198 63.1
AUR62012864 Chenopodium quinoa HOM05D007059 ORTHO05D009155 6.2e-62 241.5 225 58.2
A01p34850 Brassica napus HOM05D007059 ORTHO05D009155 1.8e-61 240.0 218 60.1
BraA01t03568Z Brassica rapa HOM05D007059 ORTHO05D009155 1.8e-61 240.0 218 60.1
AUR62017646 Chenopodium quinoa HOM05D007059 ORTHO05D009155 5.2e-61 238.4 225 57.3
Haze_11738 Corylus avellana HOM05D007059 ORTHO05D009155 1.2e-60 237.3 207 62.3
HPP92_002544 Vanilla planifolia HOM05D007059 ORTHO05D009155 2.0e-60 236.5 221 56.6
ATR0124G031 Amborella trichopoda HOM05D007059 ORTHO05D009155 2.6e-60 236.1 139 79.1
HPP92_002491 Vanilla planifolia HOM05D007059 ORTHO05D009155 3.4e-60 235.7 221 56.6
TWI77G0260 Tripterygium wilfordii HOM05D007059 ORTHO05D009155 7.5e-60 234.6 195 66.2
EL10Ac9g22903 Beta vulgaris HOM05D007059 ORTHO05D009155 1.7e-59 233.4 149 76.5
Aa31LG8G6740 Aethionema arabicum HOM05D007059 ORTHO05D009155 3.7e-59 232.3 125 88.0
Cpa.g.sc298.2 Carica papaya HOM05D007059 ORTHO05D009155 1.4e-58 230.3 215 58.1
Oeu027905.1 Olea europaea HOM05D007059 ORTHO05D009155 7.0e-58 228.0 149 78.5
Zm00001eb259420 Zea mays HOM05D007059 ORTHO05D009155 1.7e-56 223.4 126 84.1
Duzib251G0490 Durio zibethinus HOM05D007059 ORTHO05D009155 6.6e-56 221.5 236 56.8
Hund08500 Selenicereus undatus HOM05D007059 ORTHO05D009155 1.1e-55 220.7 210 56.7
Pp3c2_14430 Physcomitrium patens HOM05D007059 ORTHO05D009155 1.4e-53 213.8 166 64.5
Pp3c10_16080 Physcomitrium patens HOM05D007059 ORTHO05D009155 1.8e-53 213.4 165 66.1
Migut.E00613 Erythranthe guttata HOM05D007059 ORTHO05D009155 4.0e-53 212.2 212 57.1
AagrBONN_evm.TU.Sc2ySwM_344.1288 Anthoceros agrestis HOM05D007059 ORTHO05D009155 5.2e-53 211.8 152 66.4
SGA_v2.0_scaffold88G27235 Striga asiatica HOM05D007059 ORTHO05D009155 2.6e-52 209.5 217 53.9
SMO114G0039 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 1.3e-51 207.2 125 79.2
THA.LOC104801903 Tarenaya hassleriana HOM05D007059 ORTHO05D009155 7.1e-50 201.4 203 57.1
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 5.1e-48 195.3 111 85.6
Mapoly0055s0010 Marchantia polymorpha HOM05D007059 ORTHO05D009155 2.5e-47 193.0 145 64.1
Dinv01917 Davidia involucrata HOM05D007059 ORTHO05D009155 2.2e-43 179.9 226 49.1
Actinidia13703 Actinidia chinensis HOM05D007059 ORTHO05D009155 4.1e-42 175.6 167 59.9
PGR031G0357 Punica granatum HOM05D007059 ORTHO05D009155 8.1e-38 161.4 211 47.4
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 4.0e-37 159.1 127 66.9
CBR_g48375 Chara braunii HOM05D007059 ORTHO05D009155 1.3e-35 154.1 122 59.8
CsaV3_5G013210 Cucumis sativus L. HOM05D007059 ORTHO05D009155 1.5e-28 130.6 162 45.7
AT3G19900 Arabidopsis thaliana HOM05D007059 ORTHO05D009155 2.5e-23 113.2 144 45.1
Actinidia14379 Actinidia chinensis HOM05D007059 ORTHO05D009155 1.3e-22 110.9 56 91.1
BolC5t33201H Brassica oleracea HOM05D007059 ORTHO05D009155 1.1e-21 107.8 84 67.9
SEGI_27177 Sequoiadendron giganteum HOM05D007059 ORTHO05D009155 1.7e-19 100.5 58 79.3
SMO364G0884 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 4.6e-17 92.4 65 70.8
Cre01.g007050 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D009155 1.3e-16 90.9 141 35.5
Cre03.g197850 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D034487 9.6e-15 84.7 140 32.9
BraA05t21808Z Brassica rapa HOM05D007059 ORTHO05D040342 3.8e-11 72.8 45 80.0
A05p29230 Brassica napus HOM05D007059 ORTHO05D040342 3.2e-10 69.7 45 77.8
MCO14G049 Micromonas commoda HOM05D007059 ORTHO05D009155 1.6e-09 67.4 101 35.6
MCO11G252 Micromonas commoda HOM05D061291 ORTHO05D034487 8.2e-06 55.1 109 32.1


User provided reference genes

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