Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G624.10 Capsicum annuum HOM05D003623 ORTHO05D004335 3.7e-82 308.1 155 100.0
CAN.G2073.3 Capsicum annuum HOM05D003623 ORTHO05D004335 1.9e-49 199.5 116 87.9
Sopen09g035770 Solanum pennellii HOM05D003623 ORTHO05D004335 4.2e-49 198.4 116 87.1
Nitab4.5_0000309g0320 Nicotiana tabacum HOM05D003623 ORTHO05D004335 1.2e-48 196.8 116 86.2
Peaxi162Scf00286g00829 Petunia axillaris HOM05D003623 ORTHO05D004335 1.2e-48 196.8 116 87.1
Solyc09g097830.4 Solanum lycopersicum HOM05D003623 ORTHO05D004335 3.5e-48 195.3 116 86.2
Nitab4.5_0002260g0250 Nicotiana tabacum HOM05D003623 ORTHO05D004335 1.3e-47 193.4 116 85.3
Nitab4.5_0003358g0040 Nicotiana tabacum HOM05D003623 ORTHO05D004335 1.3e-47 193.4 116 85.3
Potri.013G051400 Populus trichocarpa HOM05D003623 ORTHO05D004335 5.1e-47 191.4 115 82.6
Solyc05g053835.2 Solanum lycopersicum HOM05D003623 ORTHO05D004335 1.9e-46 189.5 116 82.8
Sopen05g032310 Solanum pennellii HOM05D003623 ORTHO05D004335 1.9e-46 189.5 116 82.8
PGSC0003DMG400015752 Solanum tuberosum HOM05D003623 ORTHO05D004335 1.9e-46 189.5 116 82.8
DCAR_026670 Daucus carota HOM05D003623 ORTHO05D004335 3.3e-46 188.7 115 82.6
Peaxi162Scf00423g00724 Petunia axillaris HOM05D003623 ORTHO05D004335 3.3e-46 188.7 116 82.8
Potri.019G025600 Populus trichocarpa HOM05D003623 ORTHO05D004335 3.3e-46 188.7 115 80.9
Sabra13G0046700 Salix brachista HOM05D003623 ORTHO05D004335 3.3e-46 188.7 111 84.7
CANSAT54G1818 Cannabis sativa HOM05D003623 ORTHO05D004335 4.3e-46 188.3 115 81.7
MSTRG.4272 Avicennia marina HOM05D003623 ORTHO05D004335 5.6e-46 188.0 115 82.6
Lj5g0011380 Lotus japonicus HOM05D003623 ORTHO05D004335 5.6e-46 188.0 111 84.7
QL06p027597 Quercus lobata HOM05D003623 ORTHO05D004335 5.6e-46 188.0 115 82.6
Sabra19G0035000 Salix brachista HOM05D003623 ORTHO05D004335 5.6e-46 188.0 115 82.6
GSVIVG01026359001 Vitis vinifera HOM05D003623 ORTHO05D004335 7.3e-46 187.6 115 81.7
Sabra19G0038000 Salix brachista HOM05D003623 ORTHO05D004335 9.6e-46 187.2 115 81.7
SalBow2G2507 Salvia bowleyana HOM05D003623 ORTHO05D004335 9.6e-46 187.2 115 82.6
MSTRG.9774 Avicennia marina HOM05D003623 ORTHO05D004335 1.3e-45 186.8 116 81.9
CAN.G1310.13 Capsicum annuum HOM05D003623 ORTHO05D004335 1.6e-45 186.4 116 81.0
Cfa008669 Carpinus fangiana HOM05D003623 ORTHO05D004335 1.6e-45 186.4 115 81.7
MELO3C010102.2 Cucumis melo HOM05D003623 ORTHO05D004335 1.6e-45 186.4 111 84.7
CsaV3_1G045020 Cucumis sativus L. HOM05D003623 ORTHO05D004335 1.6e-45 186.4 111 84.7
Glyma.10G168700 Glycine max HOM05D003623 ORTHO05D004335 1.6e-45 186.4 115 80.9
CSS0050373 Camellia sinensis var. sinensis HOM05D003623 ORTHO05D004335 2.1e-45 186.0 117 82.1
Sabra19G0038200 Salix brachista HOM05D003623 ORTHO05D004335 2.1e-45 186.0 115 81.7
VMungo0720G0796 Vigna mungo HOM05D003623 ORTHO05D004335 2.1e-45 186.0 115 80.9
Cpa.g.sc51.46 Carica papaya HOM05D003623 ORTHO05D004335 2.8e-45 185.7 115 80.9
Cc03_g09530 Coffea canephora HOM05D003623 ORTHO05D004335 2.8e-45 185.7 115 80.9
Thecc.05G264600 Theobroma cacao HOM05D003623 ORTHO05D004335 2.8e-45 185.7 115 80.9
ClCG03G011450 Citrullus lanatus HOM05D003623 ORTHO05D004335 3.6e-45 185.3 111 83.8
Manes.09G145400 Manihot esculenta HOM05D003623 ORTHO05D004335 3.6e-45 185.3 111 82.9
Aqoxy2G03998 Aquilegia oxysepala HOM05D003623 ORTHO05D004335 6.2e-45 184.5 115 80.9
Duzib177G0921 Durio zibethinus HOM05D003623 ORTHO05D004335 6.2e-45 184.5 115 80.0
Sed0012930 Sechium edule HOM05D003623 ORTHO05D004335 6.2e-45 184.5 111 82.9
TWI34G1961 Tripterygium wilfordii HOM05D003623 ORTHO05D004335 6.2e-45 184.5 115 80.0
Actinidia20848 Actinidia chinensis HOM05D003623 ORTHO05D004335 8.1e-45 184.1 117 79.5
Gohir.A10G130700 Gossypium hirsutum HOM05D003623 ORTHO05D004335 8.1e-45 184.1 115 79.1
Gohir.D10G135700 Gossypium hirsutum HOM05D003623 ORTHO05D004335 8.1e-45 184.1 115 79.1
Gorai.011G150500 Gossypium raimondii HOM05D003623 ORTHO05D004335 8.1e-45 184.1 115 79.1
TAR362G0319 Trochodendron aralioides HOM05D003623 ORTHO05D004335 8.1e-45 184.1 115 80.0
Phvul.L002532 Phaseolus vulgaris HOM05D003623 ORTHO05D004335 1.1e-44 183.7 109 84.4
TAR633G0333 Trochodendron aralioides HOM05D003623 ORTHO05D004335 1.1e-44 183.7 115 81.7
unitig_37.g12000 Utricularia gibba HOM05D003623 ORTHO05D004335 1.1e-44 183.7 116 80.2
Ciclev10018711m.g Citrus clementina HOM05D003623 ORTHO05D004335 1.4e-44 183.3 115 80.9
TWI60G1592 Tripterygium wilfordii HOM05D003623 ORTHO05D004335 1.4e-44 183.3 115 79.1
Ca_09980_v3 Cicer arietinum L. HOM05D003623 ORTHO05D004335 1.8e-44 183.0 111 82.0
Glyma.20G221000 Glycine max HOM05D003623 ORTHO05D004335 1.8e-44 183.0 111 82.0
arahy.Tifrunner.gnm1.ann1.3CZ4H2 Arachis hypogaea HOM05D003623 ORTHO05D004335 2.4e-44 182.6 111 82.9
arahy.Tifrunner.gnm1.ann1.97NMUU Arachis hypogaea HOM05D003623 ORTHO05D004335 2.4e-44 182.6 111 82.9
Oeu002933.1 Olea europaea HOM05D003623 ORTHO05D004335 2.4e-44 182.6 115 80.9
TPR.G31601 Trifolium pratense HOM05D003623 ORTHO05D004335 2.4e-44 182.6 111 82.0
CSS0034552 Camellia sinensis var. sinensis HOM05D003623 ORTHO05D004335 3.1e-44 182.2 117 78.6
Gohir.A11G243000 Gossypium hirsutum HOM05D003623 ORTHO05D004335 3.1e-44 182.2 115 80.0
Eucgr.L00641 Eucalyptus grandis HOM05D003623 ORTHO05D004335 4.0e-44 181.8 115 78.3
Psat6g140680 Pisum sativum HOM05D003623 ORTHO05D004335 4.0e-44 181.8 111 81.1
Actinidia35820 Actinidia chinensis HOM05D003623 ORTHO05D004335 5.3e-44 181.4 117 77.8
FvH4_6g01310 Fragaria vesca HOM05D003623 ORTHO05D004335 5.3e-44 181.4 111 83.8
FAN02G2773 Fragaria x ananassa HOM05D003623 ORTHO05D004335 5.3e-44 181.4 111 83.8
Medtr1g079510 Medicago truncatula HOM05D003623 ORTHO05D004335 5.3e-44 181.4 115 78.3
Thecc.04G190700 Theobroma cacao HOM05D003623 ORTHO05D004335 5.3e-44 181.4 112 80.4
CANSAT78G1699 Cannabis sativa HOM05D003623 ORTHO05D004335 6.9e-44 181.0 115 77.4
CiPaw.01G112500 Carya illinoinensis HOM05D003623 ORTHO05D004335 6.9e-44 181.0 117 78.6
AUR62018537 Chenopodium quinoa HOM05D003623 ORTHO05D004335 6.9e-44 181.0 115 79.1
COL.COLO4_35966 Corchorus olitorius HOM05D003623 ORTHO05D004335 9.0e-44 180.6 110 81.8
Duzib128G0757 Durio zibethinus HOM05D003623 ORTHO05D004335 9.0e-44 180.6 115 79.1
MD12G1253100 Malus domestica HOM05D003623 ORTHO05D004335 9.0e-44 180.6 115 80.0
ECA238G2410 Erigeron canadensis HOM05D003623 ORTHO05D004335 1.2e-43 180.3 115 79.1
Lalb_Chr21g0311321 Lupinus albus HOM05D003623 ORTHO05D004335 1.2e-43 180.3 111 82.0
MBI07_g12178_MAGBIO Magnolia biondii HOM05D003623 ORTHO05D004335 1.2e-43 180.3 111 82.0
Rhsim04G0132100 Rhododendron simsii HOM05D003623 ORTHO05D004335 1.2e-43 180.3 117 78.6
MD04G1235300 Malus domestica HOM05D003623 ORTHO05D004335 1.5e-43 179.9 115 79.1
Manes.08G142800 Manihot esculenta HOM05D003623 ORTHO05D004335 1.5e-43 179.9 111 80.2
Dinv10856 Davidia involucrata HOM05D003623 ORTHO05D004335 2.0e-43 179.5 115 77.4
Migut.G00821 Erythranthe guttata HOM05D003623 ORTHO05D004335 2.0e-43 179.5 151 64.2
Hma1.2p1_0984F.1_g244260 Hydrangea macrophylla HOM05D003623 ORTHO05D004335 2.0e-43 179.5 115 78.3
RcHm_v2.0_Chr3g0448861 Rosa chinensis HOM05D003623 ORTHO05D004335 2.6e-43 179.1 113 82.3
FAN05G1824 Fragaria x ananassa HOM05D003623 ORTHO05D004335 4.4e-43 178.3 111 82.9
FAN05G2056 Fragaria x ananassa HOM05D003623 ORTHO05D004335 4.4e-43 178.3 111 82.9
Gohir.D11G252600 Gossypium hirsutum HOM05D003623 ORTHO05D004335 4.4e-43 178.3 115 79.1
Gorai.007G271100 Gossypium raimondii HOM05D003623 ORTHO05D004335 4.4e-43 178.3 115 79.1
Manes.08G146600 Manihot esculenta HOM05D003623 ORTHO05D004335 4.4e-43 178.3 111 79.3
Atru.chr2.1140 Acer truncatum HOM05D003623 ORTHO05D004335 5.8e-43 177.9 115 77.4
AUR62020880 Chenopodium quinoa HOM05D003623 ORTHO05D004335 5.8e-43 177.9 115 78.3
Migut.G01152 Erythranthe guttata HOM05D003623 ORTHO05D004335 5.8e-43 177.9 151 63.6
PSO017G5742 Papaver somniferum HOM05D003623 ORTHO05D004335 5.8e-43 177.9 115 77.4
Duzib151G0791 Durio zibethinus HOM05D003623 ORTHO05D004335 7.6e-43 177.6 117 76.9
PSO675G4779 Papaver somniferum HOM05D003623 ORTHO05D004335 7.6e-43 177.6 115 78.3
THA.LOC104821603 Tarenaya hassleriana HOM05D003623 ORTHO05D004335 7.6e-43 177.6 115 78.3
Aa31LG2G2050 Aethionema arabicum HOM05D003623 ORTHO05D004335 9.9e-43 177.2 110 80.9
HanXRQChr14g0436771 Helianthus annuus HOM05D003623 ORTHO05D004335 9.9e-43 177.2 115 77.4
Prupe.6G355200 Prunus persica HOM05D003623 ORTHO05D004335 9.9e-43 177.2 115 78.3
Gohir.A13G162400 Gossypium hirsutum HOM05D003623 ORTHO05D004335 1.3e-42 176.8 115 77.4
TWI34G1660 Tripterygium wilfordii HOM05D003623 ORTHO05D004335 1.3e-42 176.8 115 76.5
QL03p033428 Quercus lobata HOM05D003623 ORTHO05D004335 2.9e-42 175.6 111 81.1
Gorai.013G189100 Gossypium raimondii HOM05D003623 ORTHO05D004335 3.8e-42 175.3 115 76.5
Gohir.D13G171700 Gossypium hirsutum HOM05D003623 ORTHO05D004335 4.9e-42 174.9 115 76.5
HanXRQChr01g0021981 Helianthus annuus HOM05D003623 ORTHO05D004335 6.4e-42 174.5 115 77.4
EL10Ac4g09791 Beta vulgaris HOM05D003623 ORTHO05D004335 1.1e-41 173.7 115 75.7
Nn8g41257 Nelumbo nucifera HOM05D003623 ORTHO05D004335 1.1e-41 173.7 115 76.5
Hund19026 Selenicereus undatus HOM05D003623 ORTHO05D004335 1.4e-41 173.3 115 76.5
CARHR078390 Cardamine hirsuta HOM05D003623 ORTHO05D004335 1.9e-41 172.9 117 75.2
Lsat_1_v5_gn_2_49120 Lactuca sativa HOM05D003623 ORTHO05D004335 1.9e-41 172.9 115 75.7
CDE05G1163 Ceratophyllum demersum HOM05D003623 ORTHO05D004335 2.4e-41 172.6 115 73.0
Sp3g03150 Schrenkiella parvula HOM05D003623 ORTHO05D004335 2.4e-41 172.6 117 75.2
Ah.13g077780 Amaranthus hybridus HOM05D003623 ORTHO05D004335 4.2e-41 171.8 115 73.9
Duzib268G0561 Durio zibethinus HOM05D003623 ORTHO05D004335 4.2e-41 171.8 115 75.7
CDE05G0087 Ceratophyllum demersum HOM05D003623 ORTHO05D004335 5.4e-41 171.4 115 73.0
ATR0561G246 Amborella trichopoda HOM05D003623 ORTHO05D004335 7.1e-41 171.0 115 74.8
EL10Ac3g07439 Beta vulgaris HOM05D003623 ORTHO05D004335 9.3e-41 170.6 115 73.0
Carub.0003s0346 Capsella rubella HOM05D003623 ORTHO05D004335 9.3e-41 170.6 117 73.5
Aa31LG5G14720 Aethionema arabicum HOM05D003623 ORTHO05D004335 1.2e-40 170.2 115 74.8
AT3G04240 Arabidopsis thaliana HOM05D003623 ORTHO05D004335 1.2e-40 170.2 117 74.4
A01p40930 Brassica napus HOM05D003623 ORTHO05D004335 1.2e-40 170.2 115 74.8
BNapus_Darmor_BZH_scaffold_78p00780 Brassica napus HOM05D003623 ORTHO05D004335 1.2e-40 170.2 115 74.8
BraA01t04529Z Brassica rapa HOM05D003623 ORTHO05D004335 1.2e-40 170.2 115 74.8
Thhalv10019996m.g Eutrema salsugineum HOM05D003623 ORTHO05D004335 1.2e-40 170.2 117 74.4
AL3G14190 Arabidopsis lyrata HOM05D003623 ORTHO05D004335 1.6e-40 169.9 117 74.4
Hund07163 Selenicereus undatus HOM05D003623 ORTHO05D004335 1.6e-40 169.9 115 75.7
Sc16g0010040 Simmondsia chinensis HOM05D003623 ORTHO05D004335 1.6e-40 169.9 115 73.9
BolC1t05759H Brassica oleracea HOM05D003623 ORTHO05D004335 2.1e-40 169.5 115 73.9
HanXRQChr09g0260781 Helianthus annuus HOM05D003623 ORTHO05D004335 2.1e-40 169.5 115 74.8
THA.LOC104820750 Tarenaya hassleriana HOM05D003623 ORTHO05D004335 2.1e-40 169.5 115 73.0
FAN09G2957 Fragaria x ananassa HOM05D003623 ORTHO05D004335 6.0e-40 167.9 130 70.8
AUR62006999 Chenopodium quinoa HOM05D003623 ORTHO05D004335 7.8e-40 167.5 115 73.9
Zm00001eb241190 Zea mays HOM05D003623 ORTHO05D004335 1.3e-39 166.8 110 75.5
SEGI_12158 Sequoiadendron giganteum HOM05D003623 ORTHO05D004335 1.7e-39 166.4 115 72.2
HPP92_006960 Vanilla planifolia HOM05D003623 ORTHO05D004335 3.9e-39 165.2 115 73.0
Haze_11688 Corylus avellana HOM05D003623 ORTHO05D004335 8.7e-39 164.1 169 56.8
HPP92_000441 Vanilla planifolia HOM05D003623 ORTHO05D004335 2.5e-38 162.5 115 73.9
arahy.Tifrunner.gnm1.ann1.LG1RTX Arachis hypogaea HOM05D003623 ORTHO05D004335 1.3e-37 160.2 111 74.8
Mapoly0034s0037 Marchantia polymorpha HOM05D003623 ORTHO05D004335 4.8e-37 158.3 115 68.7
Pp3c5_10370 Physcomitrium patens HOM05D003623 ORTHO05D004335 6.9e-36 154.5 115 68.7
SEGI_29220 Sequoiadendron giganteum HOM05D003623 ORTHO05D004335 9.0e-36 154.1 115 67.0
Pp3c6_13940 Physcomitrium patens HOM05D003623 ORTHO05D004335 1.2e-35 153.7 115 67.8
SMO347G0623 Selaginella moellendorffii HOM05D003623 ORTHO05D004335 1.2e-35 153.7 115 67.8
arahy.Tifrunner.gnm1.ann1.XW6TTL Arachis hypogaea HOM05D003623 ORTHO05D004335 2.6e-35 152.5 111 72.1
arahy.Tifrunner.gnm1.ann1.KMGM6D Arachis hypogaea HOM05D003623 ORTHO05D004335 4.9e-34 148.3 93 80.6
arahy.Tifrunner.gnm1.ann1.B933NQ Arachis hypogaea HOM05D003623 ORTHO05D004335 1.4e-33 146.7 91 80.2
CAN.G2073.2 Capsicum annuum HOM05D003623 ORTHO05D004335 9.3e-33 144.1 78 91.0
Dinv32173 Davidia involucrata HOM05D003623 ORTHO05D004335 1.2e-32 143.7 87 81.6
vmacro00425 Vaccinium macrocarpon HOM05D003623 ORTHO05D004335 1.3e-29 133.7 85 77.6
MELO3C005185.2 Cucumis melo HOM05D003623 ORTHO05D004335 1.6e-29 133.3 83 79.5
PRCOL_00000371 Prasinoderma coloniale HOM05D003623 ORTHO05D004335 2.8e-29 132.5 151 47.0
AagrBONN_evm.TU.Sc2ySwM_117.2298 Anthoceros agrestis HOM05D003623 ORTHO05D004335 4.5e-27 125.2 82 75.6
Sc13g0000570 Simmondsia chinensis HOM05D003623 ORTHO05D004335 1.7e-26 123.2 83 71.1
CBR_g46307 Chara braunii HOM05D003623 ORTHO05D004335 3.8e-26 122.1 98 62.2
CAN.G148.2 Capsicum annuum HOM05D003623 ORTHO05D004335 9.6e-22 107.5 65 78.5
GSVIVG01023480001 Vitis vinifera HOM05D003623 ORTHO05D004335 1.4e-20 103.6 80 66.2
Lj6A347G37 Lonicera japonica HOM05D003623 ORTHO05D004335 1.7e-18 96.7 60 78.3
COL.COLO4_38176 Corchorus olitorius HOM05D003623 ORTHO05D004335 5.5e-17 91.7 54 87.0
arahy.Tifrunner.gnm1.ann1.7AB0RC Arachis hypogaea HOM05D003623 ORTHO05D017478 1.3e-15 87.0 58 72.4
Sc13g0000520 Simmondsia chinensis HOM05D003623 ORTHO05D004335 2.4e-12 76.3 50 78.0
Nn1g08118 Nelumbo nucifera HOM05D003623 ORTHO05D004335 1.0e-07 60.8 115 36.5
Os02g0489550 Oryza sativa ssp. japonica HOM05D003623 ORTHO05D004335 1.8e-07 60.1 111 36.9
Cfa024743 Carpinus fangiana HOM05D003623 ORTHO05D004335 8.8e-07 57.8 98 37.8


User provided reference genes

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