Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G623.98 Capsicum annuum HOM05D002887 ORTHO05D003159 1.2e-124 449.9 230 100.0
CAN.G943.14 Capsicum annuum HOM05D002887 ORTHO05D003159 5.5e-90 334.7 223 79.8
CAN.G623.86 Capsicum annuum HOM05D002887 ORTHO05D003159 4.9e-54 215.3 123 87.8
CAN.G4473.1 Capsicum annuum HOM05D002887 ORTHO05D003159 8.3e-54 214.5 121 90.1
CAN.G623.95 Capsicum annuum HOM05D002887 ORTHO05D003159 5.1e-43 178.7 121 76.9
CAN.G943.9 Capsicum annuum HOM05D002887 ORTHO05D003159 8.6e-43 177.9 121 76.9
CAN.G943.13 Capsicum annuum HOM05D002887 ORTHO05D003159 9.5e-42 174.5 121 75.2
CAN.G2325.1 Capsicum annuum HOM05D002887 ORTHO05D003159 3.6e-41 172.6 121 75.2
CAN.G20378.1 Capsicum annuum HOM05D002887 ORTHO05D003159 4.7e-41 172.2 121 73.6
CAN.G4473.2 Capsicum annuum HOM05D002887 ORTHO05D003159 2.9e-38 162.9 115 72.2
CAN.G623.102 Capsicum annuum HOM05D002887 ORTHO05D003159 6.6e-35 151.8 105 75.2
CAN.G623.96 Capsicum annuum HOM05D002887 ORTHO05D003159 6.6e-35 151.8 103 72.8
CAN.G943.16 Capsicum annuum HOM05D002887 ORTHO05D003159 9.5e-34 147.9 107 72.9
CAN.G943.18 Capsicum annuum HOM05D002887 ORTHO05D003159 6.2e-33 145.2 103 71.8
CAN.G7707.1 Capsicum annuum HOM05D002887 ORTHO05D003159 6.8e-32 141.7 121 67.8
CAN.G623.87 Capsicum annuum HOM05D002887 ORTHO05D003159 3.2e-29 132.9 104 70.2
CAN.G623.100 Capsicum annuum HOM05D002887 ORTHO05D003159 7.1e-29 131.7 204 42.2
CAN.G623.83 Capsicum annuum HOM05D002887 ORTHO05D003159 9.2e-29 131.3 168 49.4
CAN.G623.85 Capsicum annuum HOM05D002887 ORTHO05D003159 9.2e-29 131.3 90 74.4
CAN.G943.17 Capsicum annuum HOM05D002887 ORTHO05D003159 9.2e-29 131.3 167 49.7
CAN.G623.99 Capsicum annuum HOM05D002887 ORTHO05D003159 1.2e-28 131.0 167 49.7
CAN.G943.12 Capsicum annuum HOM05D002887 ORTHO05D003159 1.6e-28 130.6 167 49.7
CAN.G943.7 Capsicum annuum HOM05D002887 ORTHO05D003159 1.6e-28 130.6 167 49.7
CAN.G623.89 Capsicum annuum HOM05D002887 ORTHO05D003159 2.1e-28 130.2 104 69.2
CAN.G943.15 Capsicum annuum HOM05D002887 ORTHO05D003159 1.3e-27 127.5 167 48.5
CAN.G623.97 Capsicum annuum HOM05D002887 ORTHO05D003159 1.9e-26 123.6 165 47.9
CAN.G943.10 Capsicum annuum HOM05D002887 ORTHO05D003159 9.6e-26 121.3 167 47.3
CAN.G523.32 Capsicum annuum HOM05D002887 ORTHO05D003159 5.8e-23 112.1 85 67.1
Nitab4.5_0001235g0010 Nicotiana tabacum HOM05D002887 ORTHO05D003159 5.8e-23 112.1 141 49.6
Nitab4.5_0000294g0200 Nicotiana tabacum HOM05D002887 ORTHO05D003159 2.9e-22 109.8 141 48.9
CAN.G623.93 Capsicum annuum HOM05D002887 ORTHO05D003159 6.0e-20 102.1 67 76.1
Peaxi162Scf00232g00091 Petunia axillaris HOM05D002887 ORTHO05D003159 6.0e-20 102.1 88 61.4
Sopen07g034420 Solanum pennellii HOM05D002887 ORTHO05D003159 1.0e-19 101.3 88 63.6
Solyc07g066240.3 Solanum lycopersicum HOM05D002887 ORTHO05D003159 8.7e-19 98.2 88 62.5
PGSC0003DMG400022247 Solanum tuberosum HOM05D002887 ORTHO05D003159 3.3e-18 96.3 88 61.4
MBI14_g10260_MAGBIO Magnolia biondii HOM05D002887 ORTHO05D003159 1.5e-15 87.4 141 37.6
Rhsim04G0006800 Rhododendron simsii HOM05D002887 ORTHO05D003159 4.9e-14 82.4 90 47.8
vmacro09794 Vaccinium macrocarpon HOM05D002887 ORTHO05D003159 4.9e-14 82.4 88 48.9
CSS0039257 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 1.9e-13 80.5 94 43.6
CSS0049070 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 1.9e-13 80.5 94 43.6
Dinv19635 Davidia involucrata HOM05D002887 ORTHO05D003159 1.9e-13 80.5 141 36.2
Actinidia27042 Actinidia chinensis HOM05D002887 ORTHO05D003159 2.4e-13 80.1 88 44.3
MSTRG.14532 Avicennia marina HOM05D002887 ORTHO05D003159 2.4e-13 80.1 94 46.8
SGA_v2.0_scaffold49G18166 Striga asiatica HOM05D002887 ORTHO05D003159 2.4e-13 80.1 83 47.0
Ciclev10007786m.g Citrus clementina HOM05D002887 ORTHO05D003159 5.4e-13 79.0 88 47.7
Cc05_g15820 Coffea canephora HOM05D002887 ORTHO05D003159 5.4e-13 79.0 88 46.6
Oeu052878.1 Olea europaea HOM05D002887 ORTHO05D003159 5.4e-13 79.0 88 48.9
Haze_09925 Corylus avellana HOM05D002887 ORTHO05D003159 9.3e-13 78.2 83 43.4
Cfa016970 Carpinus fangiana HOM05D002887 ORTHO05D003159 1.2e-12 77.8 83 42.2
TWI39G1273 Tripterygium wilfordii HOM05D002887 ORTHO05D003159 1.6e-12 77.4 106 38.7
Atru.chr2.3909 Acer truncatum HOM05D002887 ORTHO05D003159 2.7e-12 76.6 88 46.6
Manes.06G049300 Manihot esculenta HOM05D002887 ORTHO05D003159 2.7e-12 76.6 141 36.2
GSVIVG01014858001 Vitis vinifera HOM05D002887 ORTHO05D003159 6.0e-12 75.5 141 32.6
QL08p000165 Quercus lobata HOM05D002887 ORTHO05D003159 7.9e-12 75.1 88 42.0
AL1G63640 Arabidopsis lyrata HOM05D002887 ORTHO05D003159 1.3e-11 74.3 88 43.2
AT1G55590 Arabidopsis thaliana HOM05D002887 ORTHO05D003159 1.8e-11 73.9 88 43.2
Sabra11G0137200 Salix brachista HOM05D002887 ORTHO05D003159 1.8e-11 73.9 88 44.3
Thhalv10011328m.g Eutrema salsugineum HOM05D002887 ORTHO05D003159 2.3e-11 73.6 88 43.2
BcaB07g33199 Brassica carinata HOM05D002887 ORTHO05D003159 3.0e-11 73.2 88 43.2
Lj1C902G8 Lonicera japonica HOM05D002887 ORTHO05D003159 3.0e-11 73.2 88 48.9
BcaC08g43637 Brassica carinata HOM05D002887 ORTHO05D003159 3.9e-11 72.8 88 43.2
A06p00120 Brassica napus HOM05D002887 ORTHO05D003159 3.9e-11 72.8 88 43.2
C06p10530 Brassica napus HOM05D002887 ORTHO05D003159 3.9e-11 72.8 88 43.2
BolC6t36133H Brassica oleracea HOM05D002887 ORTHO05D003159 3.9e-11 72.8 88 43.2
BraA06t23230Z Brassica rapa HOM05D002887 ORTHO05D003159 3.9e-11 72.8 88 43.2
MD11G1047600 Malus domestica HOM05D002887 ORTHO05D003159 3.9e-11 72.8 88 43.2
Sp1g41210 Schrenkiella parvula HOM05D002887 ORTHO05D003159 3.9e-11 72.8 88 44.3
Carub.0001s4411 Capsella rubella HOM05D002887 ORTHO05D003159 5.1e-11 72.4 112 36.6
CAN.G943.19 Capsicum annuum HOM05D002887 ORTHO05D003159 5.1e-11 72.4 41 87.8
Migut.H01703 Erythranthe guttata HOM05D002887 ORTHO05D003159 5.1e-11 72.4 85 45.9
Potri.011G169800 Populus trichocarpa HOM05D002887 ORTHO05D003159 5.1e-11 72.4 112 39.3
DCAR_016809 Daucus carota HOM05D002887 ORTHO05D003159 6.7e-11 72.0 88 45.5
Aa31LG10G620 Aethionema arabicum HOM05D002887 ORTHO05D003159 1.1e-10 71.2 88 40.9
CsaV3_7G021230 Cucumis sativus L. HOM05D002887 ORTHO05D003159 1.1e-10 71.2 88 44.3
ECA236G4850 Erigeron canadensis HOM05D002887 ORTHO05D003159 1.1e-10 71.2 88 40.9
FvH4_3g41370 Fragaria vesca HOM05D002887 ORTHO05D003159 1.5e-10 70.9 83 41.0
HanXRQChr11g0335231 Helianthus annuus HOM05D002887 ORTHO05D003159 1.9e-10 70.5 107 41.1
Prupe.6G036600 Prunus persica HOM05D002887 ORTHO05D003159 2.5e-10 70.1 88 44.3
FAN21G1274 Fragaria x ananassa HOM05D002887 ORTHO05D003159 3.3e-10 69.7 83 41.0
FAN11G2314 Fragaria x ananassa HOM05D002887 ORTHO05D003159 4.3e-10 69.3 83 41.0
SEGI_07697 Sequoiadendron giganteum HOM05D002887 ORTHO05D003159 5.6e-10 68.9 85 45.9
ClCG09G021800 Citrullus lanatus HOM05D002887 ORTHO05D003159 7.4e-10 68.6 88 43.2
Eucgr.J00763 Eucalyptus grandis HOM05D002887 ORTHO05D003159 7.4e-10 68.6 141 31.9
HPP92_018919 Vanilla planifolia HOM05D002887 ORTHO05D003159 7.4e-10 68.6 88 40.9
MELO3C013232.2 Cucumis melo HOM05D002887 ORTHO05D003159 9.6e-10 68.2 88 42.0
RcHm_v2.0_Chr5g0074291 Rosa chinensis HOM05D002887 ORTHO05D003159 9.6e-10 68.2 83 38.6
FAN25G0222 Fragaria x ananassa HOM05D002887 ORTHO05D003159 3.7e-09 66.2 79 41.8
PGR119G2044 Punica granatum HOM05D002887 ORTHO05D003159 6.2e-09 65.5 85 40.0
ECA236G2003 Erigeron canadensis HOM05D002887 ORTHO05D003159 2.4e-08 63.5 83 41.0
THA.LOC104810311 Tarenaya hassleriana HOM05D002887 ORTHO05D003159 2.4e-08 63.5 90 40.0
CAN.G623.103 Capsicum annuum HOM05D002887 ORTHO05D003159 1.5e-07 60.8 41 80.5
SEGI_36055 Sequoiadendron giganteum HOM05D002887 ORTHO05D003159 2.6e-07 60.1 113 31.9
Zm00001eb199550 Zea mays HOM05D002887 ORTHO05D003159 8.4e-06 55.1 88 36.4


User provided reference genes

Program Settings