Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G623.52 Capsicum annuum HOM05D007771 ORTHO05D009850 6.6e-24 113.6 76 100.0
Sopen07g034140 Solanum pennellii HOM05D007771 ORTHO05D009850 1.2e-17 92.8 73 64.4
PGSC0003DMG400022153 Solanum tuberosum HOM05D007771 ORTHO05D009850 3.5e-17 91.3 73 61.6
Solyc07g065940.1 Solanum lycopersicum HOM05D007771 ORTHO05D009850 2.4e-13 78.6 67 61.2
arahy.Tifrunner.gnm1.ann1.YJMT2M Arachis hypogaea HOM05D007771 ORTHO05D009850 8.9e-13 76.6 68 64.7
arahy.Tifrunner.gnm1.ann1.0J0D7Z Arachis hypogaea HOM05D007771 ORTHO05D009850 4.4e-12 74.3 68 55.9
arahy.Tifrunner.gnm1.ann1.29L1CF Arachis hypogaea HOM05D007771 ORTHO05D009850 4.4e-12 74.3 68 55.9
Phvul.008G282400 Phaseolus vulgaris HOM05D007771 ORTHO05D009850 7.6e-12 73.6 68 54.4
MD03G1039700 Malus domestica HOM05D007771 ORTHO05D009850 1.3e-11 72.8 68 54.4
Potri.001G469401 Populus trichocarpa HOM05D007771 ORTHO05D009850 1.7e-11 72.4 72 52.8
Cfa016941 Carpinus fangiana HOM05D007771 ORTHO05D009850 2.2e-11 72.0 65 58.5
Manes.02G224000 Manihot esculenta HOM05D007771 ORTHO05D009850 2.2e-11 72.0 71 53.5
Manes.05G206300 Manihot esculenta HOM05D007771 ORTHO05D009850 2.2e-11 72.0 69 53.6
Glyma.02G303200 Glycine max HOM05D007771 ORTHO05D009850 3.8e-11 71.2 68 51.5
TWI39G0067 Tripterygium wilfordii HOM05D007771 ORTHO05D009850 3.8e-11 71.2 68 55.9
LjContig00081g0001678 Lotus japonicus HOM05D007771 ORTHO05D009850 4.9e-11 70.9 68 52.9
Glyma.14G010700 Glycine max HOM05D007771 ORTHO05D009850 8.4e-11 70.1 68 50.0
MD11G1040400 Malus domestica HOM05D007771 ORTHO05D009850 8.4e-11 70.1 64 54.7
Thecc.07G005300 Theobroma cacao HOM05D007771 ORTHO05D009850 8.4e-11 70.1 68 55.9
Medtr5g096780 Medicago truncatula HOM05D007771 ORTHO05D009850 1.1e-10 69.7 68 52.9
Eucgr.F03660 Eucalyptus grandis HOM05D007771 ORTHO05D009850 2.4e-10 68.6 68 54.4
TPR.G1243 Trifolium pratense HOM05D007771 ORTHO05D009850 2.4e-10 68.6 68 50.0
Potri.005G061200 Populus trichocarpa HOM05D007771 ORTHO05D009850 3.2e-10 68.2 68 45.6
QL08p001590 Quercus lobata HOM05D007771 ORTHO05D009850 3.2e-10 68.2 68 52.9
Cc05_g15490 Coffea canephora HOM05D007771 ORTHO05D009850 4.1e-10 67.8 68 50.0
Lalb_Chr17g0349031 Lupinus albus HOM05D007771 ORTHO05D009850 5.4e-10 67.4 68 55.9
Medtr5g096760 Medicago truncatula HOM05D007771 ORTHO05D009850 5.4e-10 67.4 68 50.0
Atru.chr2.3846 Acer truncatum HOM05D007771 ORTHO05D009850 1.6e-09 65.9 69 50.7
CiPaw.11G208800 Carya illinoinensis HOM05D007771 ORTHO05D009850 1.6e-09 65.9 72 51.4
Duzib268G1197 Durio zibethinus HOM05D007771 ORTHO05D009850 2.1e-09 65.5 38 76.3
ClCG10G004130 Citrullus lanatus HOM05D007771 ORTHO05D009850 2.7e-09 65.1 38 76.3
Potri.011G166250 Populus trichocarpa HOM05D007771 ORTHO05D009850 2.7e-09 65.1 69 49.3
MELO3C014083.2 Cucumis melo HOM05D007771 ORTHO05D009850 3.5e-09 64.7 38 76.3
Gohir.D05G386700 Gossypium hirsutum HOM05D007771 ORTHO05D009850 3.5e-09 64.7 68 55.9
CANSAT11G2411 Cannabis sativa HOM05D007771 ORTHO05D009850 6.0e-09 63.9 38 73.7
PGR083G2136 Punica granatum HOM05D007771 ORTHO05D009850 6.0e-09 63.9 37 75.7
FAN11G2649 Fragaria x ananassa HOM05D007771 ORTHO05D009850 1.0e-08 63.2 38 71.1
Nn1g08434 Nelumbo nucifera HOM05D007771 ORTHO05D009850 1.0e-08 63.2 76 47.4
TAR627G1191 Trochodendron aralioides HOM05D007771 ORTHO05D009850 1.7e-08 62.4 68 50.0
BcaC05g29197 Brassica carinata HOM05D007771 ORTHO05D009850 2.3e-08 62.0 38 76.3
C05p54690 Brassica napus HOM05D007771 ORTHO05D009850 2.3e-08 62.0 38 76.3
BolC5t34139H Brassica oleracea HOM05D007771 ORTHO05D009850 2.3e-08 62.0 38 76.3
BraA05t22434Z Brassica rapa HOM05D007771 ORTHO05D009850 2.3e-08 62.0 38 76.3
Ciclev10010110m.g Citrus clementina HOM05D007771 ORTHO05D009850 2.3e-08 62.0 66 48.5
BcaB06g25475 Brassica carinata HOM05D007771 ORTHO05D009850 3.0e-08 61.6 38 76.3
A05p36330 Brassica napus HOM05D007771 ORTHO05D009850 3.0e-08 61.6 38 73.7
BolC1t05126H Brassica oleracea HOM05D007771 ORTHO05D009850 3.0e-08 61.6 37 78.4
CARHR087900 Cardamine hirsuta HOM05D007771 ORTHO05D009850 3.0e-08 61.6 37 78.4
Migut.H01728 Erythranthe guttata HOM05D007771 ORTHO05D009850 3.0e-08 61.6 38 71.1
Potri.007G107500 Populus trichocarpa HOM05D007771 ORTHO05D009850 3.0e-08 61.6 70 45.7
A03p38110 Brassica napus HOM05D004608 ORTHO05D006533 3.9e-08 61.2 38 73.7
AT3G13275 Arabidopsis thaliana HOM05D007771 ORTHO05D009850 5.1e-08 60.8 37 75.7
EL10Ac4g07508 Beta vulgaris HOM05D007771 ORTHO05D009850 5.1e-08 60.8 37 64.9
Carub.0003s1266 Capsella rubella HOM05D007771 ORTHO05D009850 5.1e-08 60.8 37 75.7
Thhalv10022324m.g Eutrema salsugineum HOM05D007771 ORTHO05D009850 5.1e-08 60.8 38 73.7
AL3G25100 Arabidopsis lyrata HOM05D007771 ORTHO05D009850 6.6e-08 60.5 37 75.7
BolC3t16896H Brassica oleracea HOM05D007771 ORTHO05D009850 6.6e-08 60.5 38 71.1
RcHm_v2.0_Chr5g0075191 Rosa chinensis HOM05D007771 ORTHO05D009850 6.6e-08 60.5 68 48.5
Sp3g11480 Schrenkiella parvula HOM05D007771 ORTHO05D009850 6.6e-08 60.5 37 75.7
EL10Ac4g09984 Beta vulgaris HOM05D007771 ORTHO05D009850 8.7e-08 60.1 36 72.2
BcaB04g16929 Brassica carinata HOM05D007771 ORTHO05D009850 8.7e-08 60.1 37 75.7
Sed0026400 Sechium edule HOM05D007771 ORTHO05D009850 8.7e-08 60.1 38 68.4
A01p40280 Brassica napus HOM05D004608 ORTHO05D006533 1.1e-07 59.7 37 73.0
C01p51800 Brassica napus HOM05D004608 ORTHO05D006533 1.1e-07 59.7 37 73.0
BraA01t04064Z Brassica rapa HOM05D004608 ORTHO05D006533 1.1e-07 59.7 37 73.0
MBI15_g00878_MAGBIO Magnolia biondii HOM05D007771 ORTHO05D009850 1.5e-07 59.3 64 46.9
BcaC01g01562 Brassica carinata HOM05D007771 ORTHO05D009850 1.9e-07 58.9 37 73.0
A08p00340 Brassica napus HOM05D007771 ORTHO05D009850 1.9e-07 58.9 37 73.0
C03p93160 Brassica napus HOM05D007771 ORTHO05D009850 1.9e-07 58.9 37 73.0
BolC3t21615H Brassica oleracea HOM05D007771 ORTHO05D009850 1.9e-07 58.9 37 73.0
BraA08t32092Z Brassica rapa HOM05D007771 ORTHO05D009850 1.9e-07 58.9 37 73.0
C03p46260 Brassica napus HOM05D007771 ORTHO05D009850 3.3e-07 58.2 38 68.4
PGSC0003DMG400014434 Solanum tuberosum HOM05D007771 ORTHO05D009850 3.3e-07 58.2 64 46.9
AL1G63820 Arabidopsis lyrata HOM05D007771 ORTHO05D009850 7.3e-07 57.0 37 73.0
CARHR045420 Cardamine hirsuta HOM05D007771 ORTHO05D009850 9.6e-07 56.6 37 70.3
Gohir.A04G003000 Gossypium hirsutum HOM05D007771 ORTHO05D009850 3.6e-06 54.7 60 53.3
Gorai.009G453400 Gossypium raimondii HOM05D007771 ORTHO05D009850 3.6e-06 54.7 60 53.3


User provided reference genes

Program Settings