Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G623.49 Capsicum annuum HOM05D013972 ORTHO05D000687 1.7e-60 235.7 113 100.0
Sopen07g034120 Solanum pennellii HOM05D013972 ORTHO05D000687 5.0e-44 181.0 115 81.7
PGSC0003DMG400022261 Solanum tuberosum HOM05D013972 ORTHO05D000687 2.6e-40 168.7 94 86.2
Nitab4.5_0000152g0210 Nicotiana tabacum HOM05D013972 ORTHO05D000687 5.0e-36 154.5 122 62.3
Solyc07g065923.1 Solanum lycopersicum HOM05D013972 ORTHO05D000687 9.5e-35 150.2 115 69.6
PGSC0003DMG400044148 Solanum tuberosum HOM05D013972 ORTHO05D000687 3.0e-33 145.2 124 62.1
Nitab4.5_0009707g0010 Nicotiana tabacum HOM05D013972 ORTHO05D000687 1.5e-32 142.9 119 61.3
Solyc07g065927.1 Solanum lycopersicum HOM05D000913 ORTHO05D000687 9.2e-30 133.7 126 58.7
Nitab4.5_0000134g0080 Nicotiana tabacum HOM05D000913 ORTHO05D000687 5.6e-27 124.4 136 52.9
Solyc12g015920.2 Solanum lycopersicum HOM05D013972 ORTHO05D000687 8.0e-26 120.6 157 45.9
PGSC0003DMG400029804 Solanum tuberosum HOM05D013972 ORTHO05D000687 1.4e-25 119.8 153 46.4
Sopen12g007820 Solanum pennellii HOM05D013972 ORTHO05D000687 1.8e-25 119.4 157 45.2
Migut.M01600 Erythranthe guttata HOM05D000913 ORTHO05D000687 4.9e-15 84.7 111 49.5
Eucgr.F03666 Eucalyptus grandis HOM05D000913 ORTHO05D000687 6.6e-12 74.3 111 44.1
Dinv03824 Davidia involucrata HOM05D000913 ORTHO05D000687 1.9e-11 72.8 126 42.1
Dinv16085 Davidia involucrata HOM05D000913 ORTHO05D000687 2.5e-11 72.4 130 40.0
MD03G1039100 Malus domestica HOM05D000913 ORTHO05D000687 2.5e-11 72.4 109 46.8
arahy.Tifrunner.gnm1.ann1.J75ZHQ Arachis hypogaea HOM05D000913 ORTHO05D000687 3.3e-11 72.0 117 43.6
Peaxi162Scf00058g00179 Petunia axillaris HOM05D013972 ORTHO05D000687 4.3e-11 71.6 76 55.3
SalBow8G3675 Salvia bowleyana HOM05D000913 ORTHO05D000687 5.6e-11 71.2 119 47.1
MD11G1039300 Malus domestica HOM05D000913 ORTHO05D000687 4.7e-10 68.2 108 43.5
SalBow8G4938 Salvia bowleyana HOM05D000913 ORTHO05D000687 1.1e-09 67.0 119 47.1
Nn5g28779 Nelumbo nucifera HOM05D000913 ORTHO05D000687 1.4e-09 66.6 100 42.0
Glyma.07G098500 Glycine max HOM05D000913 ORTHO05D000687 1.8e-09 66.2 128 37.5
Nn5g28781 Nelumbo nucifera HOM05D000913 ORTHO05D000687 1.8e-09 66.2 100 42.0
Prupe.6G030400 Prunus persica HOM05D000913 ORTHO05D000687 1.8e-09 66.2 103 42.7
RcHm_v2.0_Chr5g0075291 Rosa chinensis HOM05D000913 ORTHO05D000687 1.8e-09 66.2 105 42.9
arahy.Tifrunner.gnm1.ann1.FE2NQF Arachis hypogaea HOM05D000913 ORTHO05D000687 2.3e-09 65.9 120 44.2
QL08p002158 Quercus lobata HOM05D000913 ORTHO05D000687 2.3e-09 65.9 100 42.0
Nn5g28777 Nelumbo nucifera HOM05D000913 ORTHO05D000687 5.2e-09 64.7 100 43.0
SalBow8G4274 Salvia bowleyana HOM05D000913 ORTHO05D000687 6.8e-09 64.3 112 41.1
Nn1g07601 Nelumbo nucifera HOM05D000913 ORTHO05D000687 1.5e-08 63.2 79 50.6
Prupe.6G030600 Prunus persica HOM05D000913 ORTHO05D000687 1.5e-08 63.2 81 45.7
Carub.0003s2011 Capsella rubella HOM05D000913 ORTHO05D000687 3.4e-08 62.0 110 40.9
MD10G1233100 Malus domestica HOM05D000913 ORTHO05D000687 3.4e-08 62.0 75 48.0
Potri.001G468500 Populus trichocarpa HOM05D000913 ORTHO05D000687 3.4e-08 62.0 123 39.0
GSVIVG01014798001 Vitis vinifera HOM05D000913 ORTHO05D000687 7.5e-08 60.8 115 40.9
BcaB03g14690 Brassica carinata HOM05D000913 ORTHO05D000687 9.9e-08 60.5 135 35.6
A03p35370 Brassica napus HOM05D000913 ORTHO05D000687 9.9e-08 60.5 134 34.3
BraA03t12715Z Brassica rapa HOM05D000913 ORTHO05D000687 9.9e-08 60.5 134 34.3
GSVIVG01014795001 Vitis vinifera HOM05D000913 ORTHO05D000687 9.9e-08 60.5 80 48.8
CiPaw.11G201200 Carya illinoinensis HOM05D000913 ORTHO05D000687 1.3e-07 60.1 111 40.5
MBI16_g31488_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 1.3e-07 60.1 106 36.8
MD03G1039000 Malus domestica HOM05D000913 ORTHO05D000687 1.3e-07 60.1 97 42.3
Duzib268G1294 Durio zibethinus HOM05D000913 ORTHO05D000687 1.7e-07 59.7 113 36.3
MD10G1341200 Malus domestica HOM05D000913 ORTHO05D000687 1.7e-07 59.7 59 52.5
Prupe.6G031100 Prunus persica HOM05D000913 ORTHO05D000687 1.7e-07 59.7 88 45.5
SalBow8G4609 Salvia bowleyana HOM05D000913 ORTHO05D000687 1.7e-07 59.7 112 40.2
BolC3t16566H Brassica oleracea HOM05D000913 ORTHO05D000687 2.2e-07 59.3 135 34.8
FAN25G0550 Fragaria x ananassa HOM05D000913 ORTHO05D000687 2.2e-07 59.3 74 48.6
MBI14_g17949_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 2.2e-07 59.3 121 33.1
Phvul.008G282300 Phaseolus vulgaris HOM05D000913 ORTHO05D000687 2.2e-07 59.3 101 45.5
QL08p002030 Quercus lobata HOM05D000913 ORTHO05D000687 2.2e-07 59.3 85 47.1
Prupe.6G030900 Prunus persica HOM05D000913 ORTHO05D000687 2.9e-07 58.9 80 41.2
QL08p002131 Quercus lobata HOM05D000913 ORTHO05D000687 2.9e-07 58.9 89 46.1
SGA_v2.0_scaffold4G02124 Striga asiatica HOM05D000913 ORTHO05D000687 2.9e-07 58.9 115 40.9
CiPaw.01G191500 Carya illinoinensis HOM05D000913 ORTHO05D000687 3.7e-07 58.5 85 48.2
Prupe.6G030300 Prunus persica HOM05D000913 ORTHO05D000687 3.7e-07 58.5 116 35.3
QL08p002039 Quercus lobata HOM05D000913 ORTHO05D000687 3.7e-07 58.5 85 44.7
Sabra01G0038000 Salix brachista HOM05D000913 ORTHO05D000687 3.7e-07 58.5 123 36.6
CiPaw.11G208300 Carya illinoinensis HOM05D000913 ORTHO05D000687 4.9e-07 58.2 77 48.1
Dinv03822 Davidia involucrata HOM05D000913 ORTHO05D000687 4.9e-07 58.2 101 43.6
FvH4_3g42060 Fragaria vesca HOM05D000913 ORTHO05D000687 4.9e-07 58.2 102 39.2
Manes.03G137300 Manihot esculenta HOM05D000913 ORTHO05D000687 4.9e-07 58.2 132 40.9
Prupe.3G193600 Prunus persica HOM05D000913 ORTHO05D000687 4.9e-07 58.2 119 33.6
BcaC01g04273 Brassica carinata HOM05D000913 ORTHO05D000687 6.4e-07 57.8 135 35.6
C03p42980 Brassica napus HOM05D000913 ORTHO05D000687 6.4e-07 57.8 135 35.6
CSS0038172 Camellia sinensis var. sinensis HOM05D000913 ORTHO05D000687 6.4e-07 57.8 118 40.7
MBI15_g37255_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 6.4e-07 57.8 84 42.9
SalBow8G5506 Salvia bowleyana HOM05D000913 ORTHO05D000687 6.4e-07 57.8 117 41.0
Zm00001eb080130 Zea mays HOM05D000913 ORTHO05D000687 6.4e-07 57.8 108 38.0
Glyma.09G179800 Glycine max HOM05D000913 ORTHO05D000687 8.3e-07 57.4 124 36.3
FvH4_3g42050 Fragaria vesca HOM05D000913 ORTHO05D000687 1.1e-06 57.0 97 42.3
Gorai.009G452700 Gossypium raimondii HOM05D000913 ORTHO05D000687 1.1e-06 57.0 79 39.2
MD10G1233300 Malus domestica HOM05D000913 ORTHO05D000687 1.1e-06 57.0 75 45.3
GSVIVG01014802001 Vitis vinifera HOM05D000913 ORTHO05D000687 1.1e-06 57.0 108 39.8
ATR0751G174 Amborella trichopoda HOM05D000913 ORTHO05D000687 1.4e-06 56.6 120 35.0
Cpa.g.sc12.187 Carica papaya HOM05D000913 ORTHO05D000687 1.4e-06 56.6 128 35.9
FAN11G3382 Fragaria x ananassa HOM05D000913 ORTHO05D000687 1.4e-06 56.6 109 37.6
Hma1.2p1_0193F.1_g084060 Hydrangea macrophylla HOM05D000913 ORTHO05D000687 1.4e-06 56.6 87 43.7
Thecc.07G019700 Theobroma cacao HOM05D000913 ORTHO05D000687 1.4e-06 56.6 132 34.8
FAN16G3426 Fragaria x ananassa HOM05D000913 ORTHO05D000687 1.9e-06 56.2 101 38.6
Gohir.D05G386200 Gossypium hirsutum HOM05D000913 ORTHO05D000687 1.9e-06 56.2 76 39.5
Phvul.008G216200 Phaseolus vulgaris HOM05D000913 ORTHO05D000687 1.9e-06 56.2 134 32.8
QL08p001958 Quercus lobata HOM05D000913 ORTHO05D000687 1.9e-06 56.2 82 43.9
QL08p002202 Quercus lobata HOM05D000913 ORTHO05D000687 1.9e-06 56.2 95 41.1
TAR629G2544 Trochodendron aralioides HOM05D000913 ORTHO05D000687 1.9e-06 56.2 118 40.7
Aqoxy4G01739 Aquilegia oxysepala HOM05D000913 ORTHO05D000687 2.4e-06 55.8 124 39.5
Prupe.6G030200 Prunus persica HOM05D000913 ORTHO05D000687 3.2e-06 55.5 107 37.4
arahy.Tifrunner.gnm1.ann1.JV1GEI Arachis hypogaea HOM05D000913 ORTHO05D000687 4.1e-06 55.1 135 30.4
FAN21G3003 Fragaria x ananassa HOM05D000913 ORTHO05D000687 4.1e-06 55.1 99 40.4
RcHm_v2.0_Chr5g0000231 Rosa chinensis HOM05D000913 ORTHO05D000687 4.1e-06 55.1 74 43.2
CiPaw.14G082800 Carya illinoinensis HOM05D000913 ORTHO05D000687 5.4e-06 54.7 76 46.1
Haze_09888 Corylus avellana HOM05D000913 ORTHO05D000687 5.4e-06 54.7 109 40.4
Oeu000178.1 Olea europaea HOM05D004004 ORTHO05D003284 5.4e-06 54.7 110 35.5
Thecc.07G006200 Theobroma cacao HOM05D000913 ORTHO05D000687 5.4e-06 54.7 119 36.1
Manes.11G055424 Manihot esculenta HOM05D000913 ORTHO05D000687 7.1e-06 54.3 127 40.2
FAN16G2023 Fragaria x ananassa HOM05D000913 ORTHO05D000687 9.2e-06 53.9 81 43.2
MBI14_g17948_MAGBIO Magnolia biondii HOM05D000913 ORTHO05D000687 9.2e-06 53.9 99 39.4
Sp3g18210 Schrenkiella parvula HOM05D000913 ORTHO05D000687 9.2e-06 53.9 157 32.5


User provided reference genes

Program Settings