Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G623.31 Capsicum annuum HOM05D007278 ORTHO05D009280 1.5e-240 835.9 448 100.0
Sopen07g033970 Solanum pennellii HOM05D007278 ORTHO05D009280 1.2e-168 597.0 434 79.3
PGSC0003DMG400022161 Solanum tuberosum HOM05D007278 ORTHO05D009280 4.9e-167 591.7 429 79.0
Solyc07g065760.3 Solanum lycopersicum HOM05D007278 ORTHO05D009280 1.6e-165 586.6 425 79.3
Nitab4.5_0000152g0330 Nicotiana tabacum HOM05D007278 ORTHO05D009280 4.3e-155 552.0 435 72.2
Peaxi162Scf00139g00103 Petunia axillaris HOM05D007278 ORTHO05D009280 3.1e-153 545.8 429 72.7
Nitab4.5_0010643g0030 Nicotiana tabacum HOM05D007278 ORTHO05D009280 9.9e-152 540.8 435 70.8
QL08p003254 Quercus lobata HOM05D007278 ORTHO05D009280 2.9e-87 326.6 445 47.2
Dinv10356 Davidia involucrata HOM05D007278 ORTHO05D009280 2.5e-86 323.6 457 46.6
Ciclev10010817m.g Citrus clementina HOM05D007278 ORTHO05D009280 1.5e-83 314.3 417 46.5
GSVIVG01014732001 Vitis vinifera HOM05D007278 ORTHO05D009280 2.6e-83 313.5 460 45.7
Hma1.2p1_1094F.1_g256380 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 2.2e-82 310.5 424 48.1
Atru.chr2.3762 Acer truncatum HOM05D007278 ORTHO05D009280 3.7e-82 309.7 426 46.9
Atru.chr2.3748 Acer truncatum HOM05D007278 ORTHO05D009280 1.8e-81 307.4 429 47.6
TAR626G0410 Trochodendron aralioides HOM05D007278 ORTHO05D009280 5.3e-81 305.8 443 44.5
Cfa016926 Carpinus fangiana HOM05D007278 ORTHO05D009280 2.0e-80 303.9 456 43.4
Lj8A180T100 Lonicera japonica HOM05D007278 ORTHO05D009280 4.5e-80 302.8 447 44.7
Actinidia03626 Actinidia chinensis HOM05D007278 ORTHO05D009280 8.5e-79 298.5 442 45.0
Migut.M01628 Erythranthe guttata HOM05D007278 ORTHO05D009280 8.5e-79 298.5 414 46.9
Rhsim04G0010900 Rhododendron simsii HOM05D007278 ORTHO05D009280 5.5e-78 295.8 448 43.1
MD11G1036100 Malus domestica HOM05D007278 ORTHO05D009280 1.6e-77 294.3 411 47.2
vmacro09628 Vaccinium macrocarpon HOM05D007278 ORTHO05D009280 2.7e-77 293.5 436 45.4
SalBow8G0571 Salvia bowleyana HOM05D007278 ORTHO05D009280 4.0e-76 289.7 409 48.2
CiPaw.11G206100 Carya illinoinensis HOM05D007278 ORTHO05D009280 6.8e-76 288.9 466 41.6
Haze_09857 Corylus avellana HOM05D007278 ORTHO05D009280 6.8e-76 288.9 460 43.0
SalBow8G0318 Salvia bowleyana HOM05D007278 ORTHO05D009280 1.2e-75 288.1 409 48.2
Duzib213G0397 Durio zibethinus HOM05D007278 ORTHO05D009280 2.6e-75 287.0 447 42.5
TWI38G0395 Tripterygium wilfordii HOM05D007278 ORTHO05D009280 5.7e-75 285.8 427 42.4
PGR031G2600 Punica granatum HOM05D007278 ORTHO05D009280 7.5e-75 285.4 418 42.6
Prupe.6G026900 Prunus persica HOM05D007278 ORTHO05D009280 8.3e-74 282.0 425 44.9
FvH4_3g42411 Fragaria vesca HOM05D007278 ORTHO05D009280 3.1e-73 280.0 411 44.5
FAN28G1934 Fragaria x ananassa HOM05D007278 ORTHO05D009280 5.3e-73 279.3 411 44.5
CSS0042987 Camellia sinensis var. sinensis HOM05D007278 ORTHO05D009280 1.2e-72 278.1 442 41.9
FAN11G3173 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.6e-72 277.7 411 44.8
EL10Ac4g07533 Beta vulgaris HOM05D007278 ORTHO05D009280 2.0e-72 277.3 426 42.5
HanXRQChr11g0334411 Helianthus annuus HOM05D007278 ORTHO05D009280 2.0e-72 277.3 436 41.7
FAN21G2048 Fragaria x ananassa HOM05D007278 ORTHO05D009280 1.0e-71 275.0 412 44.2
Oeu005473.1 Olea europaea HOM05D007278 ORTHO05D009280 6.5e-71 272.3 398 45.7
Nn7g37466 Nelumbo nucifera HOM05D007278 ORTHO05D009280 2.5e-70 270.4 448 40.6
Gorai.013G150800 Gossypium raimondii HOM05D007278 ORTHO05D009280 1.6e-69 267.7 441 40.6
Sabra16G0243500 Salix brachista HOM05D007278 ORTHO05D009280 2.7e-69 266.9 423 41.8
Gohir.D13G134500 Gossypium hirsutum HOM05D007278 ORTHO05D009280 6.1e-69 265.8 441 41.0
COL.COLO4_07734 Corchorus olitorius HOM05D007278 ORTHO05D009280 8.0e-69 265.4 412 42.7
Potri.001G370700 Populus trichocarpa HOM05D007278 ORTHO05D009280 1.8e-68 264.2 422 42.2
Thecc.07G008600 Theobroma cacao HOM05D007278 ORTHO05D009280 2.6e-67 260.4 418 43.3
Gohir.A13G131200 Gossypium hirsutum HOM05D007278 ORTHO05D009280 1.4e-65 254.6 434 38.5
Cpa.g.sc12.134 Carica papaya HOM05D007278 ORTHO05D009280 1.8e-65 254.2 284 51.4
ClCG10G004340 Citrullus lanatus HOM05D007278 ORTHO05D009280 1.8e-65 254.2 428 40.0
Cc05_g15160 Coffea canephora HOM05D007278 ORTHO05D009280 3.1e-65 253.4 418 41.6
PSO210G1309 Papaver somniferum HOM05D007278 ORTHO05D009280 4.1e-65 253.1 435 42.3
FAN16G1801 Fragaria x ananassa HOM05D007278 ORTHO05D009280 5.4e-65 252.7 421 42.0
Eucgr.F03677 Eucalyptus grandis HOM05D007278 ORTHO05D009280 1.6e-64 251.1 274 51.5
THA.LOC104822724 Tarenaya hassleriana HOM05D007278 ORTHO05D009280 3.5e-64 250.0 442 39.4
MELO3C014108.2 Cucumis melo HOM05D007278 ORTHO05D009280 7.7e-64 248.8 432 38.9
ATR0751G235 Amborella trichopoda HOM05D007278 ORTHO05D009280 1.0e-63 248.4 450 37.3
Lj6g0007693 Lotus japonicus HOM05D007278 ORTHO05D009280 1.0e-63 248.4 348 46.3
AT1G55830 Arabidopsis thaliana HOM05D007278 ORTHO05D009280 2.9e-63 246.9 423 40.0
Phvul.006G059206 Phaseolus vulgaris HOM05D007278 ORTHO05D009280 5.0e-63 246.1 346 43.9
ECA236G2022 Erigeron canadensis HOM05D007278 ORTHO05D009280 8.6e-63 245.4 428 40.9
RcHm_v2.0_Chr5g0075911 Rosa chinensis HOM05D007278 ORTHO05D009280 8.6e-63 245.4 412 41.0
VMungo0540G0529 Vigna mungo HOM05D007278 ORTHO05D009280 1.1e-62 245.0 262 51.5
Thhalv10011545m.g Eutrema salsugineum HOM05D007278 ORTHO05D009280 1.5e-62 244.6 419 39.9
AUR62035670 Chenopodium quinoa HOM05D007278 ORTHO05D009280 2.5e-62 243.8 439 39.6
Lsat_1_v5_gn_7_114160 Lactuca sativa HOM05D007278 ORTHO05D009280 2.5e-62 243.8 418 40.7
Sp1g41410 Schrenkiella parvula HOM05D007278 ORTHO05D009280 3.3e-62 243.4 425 39.8
AL1G63950 Arabidopsis lyrata HOM05D007278 ORTHO05D009280 7.2e-62 242.3 429 39.4
Aa31LG10G360 Aethionema arabicum HOM05D007278 ORTHO05D009280 9.5e-62 241.9 434 39.6
MD03G1032400 Malus domestica HOM05D007278 ORTHO05D009280 1.2e-61 241.5 243 54.7
Sed0005179 Sechium edule HOM05D007278 ORTHO05D009280 1.0e-60 238.4 425 38.4
CANSAT11G0150 Cannabis sativa HOM05D007278 ORTHO05D009280 1.8e-60 237.7 414 41.1
Carub.0001s4440 Capsella rubella HOM05D007278 ORTHO05D009280 5.2e-60 236.1 426 37.6
BcaC08g43656 Brassica carinata HOM05D007278 ORTHO05D009280 2.6e-59 233.8 409 39.4
C06p10730 Brassica napus HOM05D007278 ORTHO05D009280 2.6e-59 233.8 409 39.4
CARHR045530 Cardamine hirsuta HOM05D007278 ORTHO05D009280 3.4e-59 233.4 422 40.3
TPR.G17958 Trifolium pratense HOM05D007278 ORTHO05D009280 3.4e-59 233.4 344 43.9
BcaB07g33186 Brassica carinata HOM05D007278 ORTHO05D009280 1.7e-58 231.1 416 39.4
Ca_12446_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 1.7e-58 231.1 272 48.5
Hund23054 Selenicereus undatus HOM05D007278 ORTHO05D000105 4.9e-58 229.6 390 38.7
CsaV3_3G004120 Cucumis sativus L. HOM05D007278 ORTHO05D009280 8.3e-58 228.8 271 47.2
Lalb_Chr20g0114071 Lupinus albus HOM05D007278 ORTHO05D009280 1.4e-57 228.0 270 47.4
Glyma.18G074900 Glycine max HOM05D007278 ORTHO05D009280 4.1e-57 226.5 246 51.2
AUR62017137 Chenopodium quinoa HOM05D007278 ORTHO05D009280 5.4e-57 226.1 448 36.4
Ca_14732_v3 Cicer arietinum L. HOM05D007278 ORTHO05D009280 1.3e-55 221.5 245 50.2
BolC6t36159H Brassica oleracea HOM05D007278 ORTHO05D009280 1.7e-55 221.1 401 38.4
BraSC56t46403Z Brassica rapa HOM05D007278 ORTHO05D009280 2.8e-53 213.8 420 37.6
Aqoxy1G02222 Aquilegia oxysepala HOM05D007278 ORTHO05D009280 6.8e-52 209.1 337 39.2
SEGI_11808 Sequoiadendron giganteum HOM05D007278 ORTHO05D009280 5.8e-51 206.1 281 41.6
Manes.15G057600 Manihot esculenta HOM05D007278 ORTHO05D009280 3.2e-49 200.3 334 44.0
CDE10G0141 Ceratophyllum demersum HOM05D007278 ORTHO05D009280 8.6e-47 192.2 433 35.6
MD03G1032000 Malus domestica HOM05D007278 ORTHO05D009280 1.1e-44 185.3 146 65.1
arahy.Tifrunner.gnm1.ann1.BC78PS Arachis hypogaea HOM05D007278 ORTHO05D009280 1.7e-42 177.9 343 35.6
arahy.Tifrunner.gnm1.ann1.E9ZV4R Arachis hypogaea HOM05D007278 ORTHO05D009280 6.4e-42 176.0 343 35.3
Psat5g165280 Pisum sativum HOM05D007278 ORTHO05D009280 1.1e-36 158.7 195 48.2
Mapoly0076s0093 Marchantia polymorpha HOM05D007278 ORTHO05D009280 3.4e-35 153.7 244 36.9
AagrBONN_evm.TU.Sc2ySwM_344.4166 Anthoceros agrestis HOM05D007278 ORTHO05D009280 3.7e-34 150.2 270 35.6
Pp3c7_290 Physcomitrium patens HOM05D007278 ORTHO05D009280 2.3e-31 141.0 281 32.0
HPP92_028502 Vanilla planifolia HOM05D007278 ORTHO05D009280 6.2e-29 132.9 341 30.8
Hma1.2p1_0604F.1_g187790 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 2.1e-16 91.3 82 59.8
Ah.09g234860 Amaranthus hybridus HOM05D007278 ORTHO05D009280 1.1e-14 85.5 267 29.6
Hma1.2p1_0292F.1_g115510 Hydrangea macrophylla HOM05D007278 ORTHO05D009280 5.6e-14 83.2 66 59.1
BraA06t23216Z Brassica rapa HOM05D007278 ORTHO05D009280 1.2e-11 75.5 183 34.4
HPP92_017878 Vanilla planifolia HOM05D007278 ORTHO05D009280 1.8e-07 61.6 66 48.5
Thecc.07G008800 Theobroma cacao HOM05D007278 ORTHO05D009280 2.3e-07 61.2 81 46.9
Oeu039420.1 Olea europaea HOM05D003885 ORTHO05D004623 8.7e-07 59.3 71 46.5


User provided reference genes

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