Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G623.103 Capsicum annuum HOM05D002887 ORTHO05D003159 2.1e-61 238.8 118 100.0
CAN.G943.15 Capsicum annuum HOM05D002887 ORTHO05D003159 4.7e-37 157.9 115 72.2
CAN.G943.7 Capsicum annuum HOM05D002887 ORTHO05D003159 1.1e-36 156.8 115 71.3
CAN.G623.93 Capsicum annuum HOM05D002887 ORTHO05D003159 1.4e-36 156.4 115 71.3
CAN.G943.10 Capsicum annuum HOM05D002887 ORTHO05D003159 2.3e-36 155.6 115 70.4
CAN.G943.19 Capsicum annuum HOM05D002887 ORTHO05D003159 2.3e-36 155.6 84 95.2
CAN.G623.83 Capsicum annuum HOM05D002887 ORTHO05D003159 3.1e-36 155.2 115 70.4
CAN.G943.12 Capsicum annuum HOM05D002887 ORTHO05D003159 2.6e-35 152.1 115 69.6
CAN.G623.99 Capsicum annuum HOM05D002887 ORTHO05D003159 2.9e-34 148.7 115 67.8
CAN.G623.87 Capsicum annuum HOM05D002887 ORTHO05D003159 1.4e-33 146.4 110 70.0
CAN.G943.17 Capsicum annuum HOM05D002887 ORTHO05D003159 1.9e-30 136.0 96 72.9
CAN.G623.89 Capsicum annuum HOM05D002887 ORTHO05D003159 5.2e-28 127.9 86 74.4
CAN.G523.32 Capsicum annuum HOM05D002887 ORTHO05D003159 2.0e-27 125.9 113 61.9
Peaxi162Scf00232g00091 Petunia axillaris HOM05D002887 ORTHO05D003159 4.6e-24 114.8 112 56.2
PGSC0003DMG400022247 Solanum tuberosum HOM05D002887 ORTHO05D003159 4.6e-24 114.8 113 54.9
Nitab4.5_0000294g0200 Nicotiana tabacum HOM05D002887 ORTHO05D003159 6.0e-24 114.4 112 57.1
Nitab4.5_0001235g0010 Nicotiana tabacum HOM05D002887 ORTHO05D003159 7.8e-24 114.0 112 57.1
CAN.G943.14 Capsicum annuum HOM05D002887 ORTHO05D003159 1.7e-23 112.8 74 78.4
CAN.G4473.1 Capsicum annuum HOM05D002887 ORTHO05D003159 2.3e-23 112.5 74 79.7
CAN.G7707.1 Capsicum annuum HOM05D002887 ORTHO05D003159 1.9e-22 109.4 74 77.0
Solyc07g066240.3 Solanum lycopersicum HOM05D002887 ORTHO05D003159 2.1e-21 105.9 113 54.0
Sopen07g034420 Solanum pennellii HOM05D002887 ORTHO05D003159 2.1e-21 105.9 113 54.0
CAN.G623.95 Capsicum annuum HOM05D002887 ORTHO05D003159 1.1e-14 83.6 55 76.4
CAN.G943.13 Capsicum annuum HOM05D002887 ORTHO05D003159 3.3e-14 82.0 55 74.5
CAN.G623.97 Capsicum annuum HOM05D002887 ORTHO05D003159 4.3e-14 81.6 82 57.3
CAN.G943.9 Capsicum annuum HOM05D002887 ORTHO05D003159 3.7e-13 78.6 55 74.5
CAN.G20378.1 Capsicum annuum HOM05D002887 ORTHO05D003159 6.2e-13 77.8 53 73.6
CAN.G4473.2 Capsicum annuum HOM05D002887 ORTHO05D003159 6.2e-13 77.8 113 46.9
CAN.G2325.1 Capsicum annuum HOM05D002887 ORTHO05D003159 1.1e-12 77.0 55 72.7
Oeu052878.1 Olea europaea HOM05D002887 ORTHO05D003159 2.4e-12 75.9 115 40.0
CAN.G623.85 Capsicum annuum HOM05D002887 ORTHO05D003159 4.0e-12 75.1 55 70.9
CSS0039257 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 2.6e-11 72.4 118 41.5
CSS0049070 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 2.6e-11 72.4 118 41.5
Dinv19635 Davidia involucrata HOM05D002887 ORTHO05D003159 5.8e-11 71.2 102 42.2
Manes.06G049300 Manihot esculenta HOM05D002887 ORTHO05D003159 5.8e-11 71.2 118 39.8
MSTRG.14532 Avicennia marina HOM05D002887 ORTHO05D003159 2.2e-10 69.3 115 37.4
Rhsim04G0006800 Rhododendron simsii HOM05D002887 ORTHO05D003159 6.4e-10 67.8 116 39.7
Ciclev10007786m.g Citrus clementina HOM05D002887 ORTHO05D003159 8.4e-10 67.4 115 39.1
Cc05_g15820 Coffea canephora HOM05D002887 ORTHO05D003159 8.4e-10 67.4 114 38.6
vmacro09794 Vaccinium macrocarpon HOM05D002887 ORTHO05D003159 8.4e-10 67.4 116 37.9
DCAR_016809 Daucus carota HOM05D002887 ORTHO05D003159 1.4e-09 66.6 119 41.2
MBI14_g10260_MAGBIO Magnolia biondii HOM05D002887 ORTHO05D003159 1.4e-09 66.6 116 37.1
FvH4_3g41370 Fragaria vesca HOM05D002887 ORTHO05D003159 9.3e-09 63.9 115 38.3
FAN21G1274 Fragaria x ananassa HOM05D002887 ORTHO05D003159 1.6e-08 63.2 115 39.1
FAN11G2314 Fragaria x ananassa HOM05D002887 ORTHO05D003159 2.7e-08 62.4 115 38.3
CAN.G943.16 Capsicum annuum HOM05D002887 ORTHO05D003159 3.5e-08 62.0 55 61.8
FAN25G0222 Fragaria x ananassa HOM05D002887 ORTHO05D003159 6.0e-08 61.2 115 39.1
Sabra11G0137200 Salix brachista HOM05D002887 ORTHO05D003159 6.0e-08 61.2 115 36.5
Potri.011G169800 Populus trichocarpa HOM05D002887 ORTHO05D003159 7.9e-08 60.8 115 37.4
CAN.G623.98 Capsicum annuum HOM05D002887 ORTHO05D003159 1.0e-07 60.5 41 80.5
CAN.G623.86 Capsicum annuum HOM05D002887 ORTHO05D003159 1.8e-07 59.7 45 75.6
PGR119G2044 Punica granatum HOM05D002887 ORTHO05D003159 1.8e-07 59.7 115 33.0
Atru.chr2.3909 Acer truncatum HOM05D002887 ORTHO05D003159 2.3e-07 59.3 115 35.7
RcHm_v2.0_Chr5g0074291 Rosa chinensis HOM05D002887 ORTHO05D003159 2.3e-07 59.3 115 35.7
HPP92_018919 Vanilla planifolia HOM05D002887 ORTHO05D003159 5.1e-07 58.2 118 34.7
MD11G1047600 Malus domestica HOM05D002887 ORTHO05D003159 6.7e-07 57.8 90 38.9
Prupe.6G036600 Prunus persica HOM05D002887 ORTHO05D003159 6.7e-07 57.8 114 35.1
CAN.G623.102 Capsicum annuum HOM05D002887 ORTHO05D003159 8.7e-07 57.4 55 58.2
QL08p000165 Quercus lobata HOM05D002887 ORTHO05D003159 1.1e-06 57.0 115 34.8
CAN.G623.96 Capsicum annuum HOM05D002887 ORTHO05D003159 3.3e-06 55.5 110 37.3
THA.LOC104810311 Tarenaya hassleriana HOM05D002887 ORTHO05D003159 5.6e-06 54.7 115 36.5


User provided reference genes

Program Settings