Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G623.102 Capsicum annuum HOM05D002887 ORTHO05D003159 4.6e-60 234.6 136 100.0
CAN.G943.9 Capsicum annuum HOM05D002887 ORTHO05D003159 4.0e-56 221.5 136 85.3
CAN.G2325.1 Capsicum annuum HOM05D002887 ORTHO05D003159 6.9e-56 220.7 136 83.8
CAN.G623.95 Capsicum annuum HOM05D002887 ORTHO05D003159 6.9e-56 220.7 136 85.3
CAN.G943.13 Capsicum annuum HOM05D002887 ORTHO05D003159 6.9e-56 220.7 136 84.6
CAN.G943.16 Capsicum annuum HOM05D002887 ORTHO05D003159 6.9e-56 220.7 136 93.4
CAN.G20378.1 Capsicum annuum HOM05D002887 ORTHO05D003159 1.7e-54 216.1 136 83.1
CAN.G943.18 Capsicum annuum HOM05D002887 ORTHO05D003159 6.0e-52 207.6 136 89.0
CAN.G623.96 Capsicum annuum HOM05D002887 ORTHO05D003159 1.4e-48 196.4 135 86.7
CAN.G4473.1 Capsicum annuum HOM05D002887 ORTHO05D003159 1.6e-44 183.0 132 73.5
CAN.G4473.2 Capsicum annuum HOM05D002887 ORTHO05D003159 1.6e-44 183.0 105 89.5
CAN.G623.86 Capsicum annuum HOM05D002887 ORTHO05D003159 3.5e-36 155.2 105 78.1
CAN.G623.98 Capsicum annuum HOM05D002887 ORTHO05D003159 8.7e-35 150.6 105 75.2
CAN.G623.85 Capsicum annuum HOM05D002887 ORTHO05D003159 2.4e-32 142.5 136 61.0
CAN.G623.83 Capsicum annuum HOM05D002887 ORTHO05D003159 2.0e-31 139.4 117 68.4
CAN.G623.87 Capsicum annuum HOM05D002887 ORTHO05D003159 2.0e-31 139.4 117 68.4
CAN.G623.99 Capsicum annuum HOM05D002887 ORTHO05D003159 2.0e-31 139.4 120 67.5
CAN.G943.17 Capsicum annuum HOM05D002887 ORTHO05D003159 2.0e-31 139.4 117 68.4
CAN.G943.7 Capsicum annuum HOM05D002887 ORTHO05D003159 1.0e-30 137.1 120 66.7
CAN.G943.15 Capsicum annuum HOM05D002887 ORTHO05D003159 2.9e-30 135.6 117 66.7
CAN.G623.89 Capsicum annuum HOM05D002887 ORTHO05D003159 2.5e-29 132.5 117 65.8
CAN.G943.12 Capsicum annuum HOM05D002887 ORTHO05D003159 2.5e-29 132.5 120 65.0
CAN.G943.10 Capsicum annuum HOM05D002887 ORTHO05D003159 1.6e-28 129.8 120 64.2
CAN.G943.14 Capsicum annuum HOM05D002887 ORTHO05D003159 3.9e-27 125.2 135 55.6
CAN.G7707.1 Capsicum annuum HOM05D002887 ORTHO05D003159 4.3e-26 121.7 132 55.3
CAN.G623.97 Capsicum annuum HOM05D002887 ORTHO05D003159 5.7e-26 121.3 136 64.7
CAN.G623.93 Capsicum annuum HOM05D002887 ORTHO05D003159 3.4e-23 112.1 81 70.4
CAN.G523.32 Capsicum annuum HOM05D002887 ORTHO05D003159 4.2e-21 105.1 99 57.6
Nitab4.5_0001235g0010 Nicotiana tabacum HOM05D002887 ORTHO05D003159 7.2e-21 104.4 102 56.9
Nitab4.5_0000294g0200 Nicotiana tabacum HOM05D002887 ORTHO05D003159 6.1e-20 101.3 102 54.9
Solyc07g066240.3 Solanum lycopersicum HOM05D002887 ORTHO05D003159 8.8e-19 97.4 120 52.5
PGSC0003DMG400022247 Solanum tuberosum HOM05D002887 ORTHO05D003159 8.8e-19 97.4 124 51.6
Sopen07g034420 Solanum pennellii HOM05D002887 ORTHO05D003159 2.5e-18 95.9 120 51.7
Peaxi162Scf00232g00091 Petunia axillaris HOM05D002887 ORTHO05D003159 6.3e-17 91.3 102 52.0
Dinv19635 Davidia involucrata HOM05D002887 ORTHO05D003159 5.5e-13 78.2 124 38.7
MBI14_g10260_MAGBIO Magnolia biondii HOM05D002887 ORTHO05D003159 2.8e-09 65.9 84 42.9
AL1G63640 Arabidopsis lyrata HOM05D002887 ORTHO05D003159 4.8e-09 65.1 101 39.6
AT1G55590 Arabidopsis thaliana HOM05D002887 ORTHO05D003159 6.3e-09 64.7 101 39.6
BcaB07g33199 Brassica carinata HOM05D002887 ORTHO05D003159 8.2e-09 64.3 116 37.9
CSS0039257 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 1.1e-08 63.9 94 41.5
CSS0049070 Camellia sinensis var. sinensis HOM05D002887 ORTHO05D003159 1.1e-08 63.9 94 41.5
Carub.0001s4411 Capsella rubella HOM05D002887 ORTHO05D003159 1.1e-08 63.9 101 39.6
CAN.G943.19 Capsicum annuum HOM05D002887 ORTHO05D003159 1.1e-08 63.9 55 60.0
Thhalv10011328m.g Eutrema salsugineum HOM05D002887 ORTHO05D003159 1.1e-08 63.9 101 38.6
TWI39G1273 Tripterygium wilfordii HOM05D002887 ORTHO05D003159 1.1e-08 63.9 96 39.6
BcaC08g43637 Brassica carinata HOM05D002887 ORTHO05D003159 3.1e-08 62.4 94 42.6
A06p00120 Brassica napus HOM05D002887 ORTHO05D003159 3.1e-08 62.4 94 42.6
C06p10530 Brassica napus HOM05D002887 ORTHO05D003159 3.1e-08 62.4 94 42.6
BolC6t36133H Brassica oleracea HOM05D002887 ORTHO05D003159 3.1e-08 62.4 94 42.6
BraA06t23230Z Brassica rapa HOM05D002887 ORTHO05D003159 3.1e-08 62.4 94 42.6
Sp1g41210 Schrenkiella parvula HOM05D002887 ORTHO05D003159 3.1e-08 62.4 94 43.6
Cc05_g15820 Coffea canephora HOM05D002887 ORTHO05D003159 4.1e-08 62.0 72 47.2
Sed0024070 Sechium edule HOM05D002887 ORTHO05D003159 4.1e-08 62.0 85 44.7
Aa31LG10G620 Aethionema arabicum HOM05D002887 ORTHO05D003159 5.3e-08 61.6 101 36.6
Prupe.6G036600 Prunus persica HOM05D002887 ORTHO05D003159 5.3e-08 61.6 90 44.4
Rhsim04G0006800 Rhododendron simsii HOM05D002887 ORTHO05D003159 9.1e-08 60.8 94 42.6
ECA236G4850 Erigeron canadensis HOM05D002887 ORTHO05D003159 1.2e-07 60.5 94 41.5
Actinidia27042 Actinidia chinensis HOM05D002887 ORTHO05D003159 1.5e-07 60.1 72 44.4
MELO3C013232.2 Cucumis melo HOM05D002887 ORTHO05D003159 1.5e-07 60.1 90 44.4
CsaV3_7G021230 Cucumis sativus L. HOM05D002887 ORTHO05D003159 1.5e-07 60.1 90 45.6
Oeu052878.1 Olea europaea HOM05D002887 ORTHO05D003159 2.0e-07 59.7 72 48.6
ClCG09G021800 Citrullus lanatus HOM05D002887 ORTHO05D003159 2.6e-07 59.3 90 44.4
MD11G1047600 Malus domestica HOM05D002887 ORTHO05D003159 4.5e-07 58.5 87 43.7
vmacro09794 Vaccinium macrocarpon HOM05D002887 ORTHO05D003159 4.5e-07 58.5 94 42.6
MSTRG.14532 Avicennia marina HOM05D002887 ORTHO05D003159 5.9e-07 58.2 94 43.6
Ciclev10007786m.g Citrus clementina HOM05D002887 ORTHO05D003159 5.9e-07 58.2 90 40.0
Haze_09925 Corylus avellana HOM05D002887 ORTHO05D003159 5.9e-07 58.2 90 38.9
CAN.G623.103 Capsicum annuum HOM05D002887 ORTHO05D003159 7.7e-07 57.8 55 58.2
Migut.H01703 Erythranthe guttata HOM05D002887 ORTHO05D003159 7.7e-07 57.8 94 41.5
QL08p000165 Quercus lobata HOM05D002887 ORTHO05D003159 1.0e-06 57.4 87 40.2
Manes.06G049300 Manihot esculenta HOM05D002887 ORTHO05D003159 1.3e-06 57.0 88 40.9
Sabra11G0137200 Salix brachista HOM05D002887 ORTHO05D003159 1.3e-06 57.0 94 38.3
Cfa016970 Carpinus fangiana HOM05D002887 ORTHO05D003159 1.7e-06 56.6 90 37.8
Potri.011G169800 Populus trichocarpa HOM05D002887 ORTHO05D003159 6.5e-06 54.7 94 37.2
SEGI_07697 Sequoiadendron giganteum HOM05D002887 ORTHO05D003159 6.5e-06 54.7 63 49.2
HanXRQChr11g0335231 Helianthus annuus HOM05D002887 ORTHO05D003159 8.5e-06 54.3 91 39.6


User provided reference genes

Program Settings