Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G622.10 Capsicum annuum HOM05D001288 ORTHO05D001123 3.6e-57 224.6 104 100.0
CAN.G610.20 Capsicum annuum HOM05D001288 ORTHO05D001123 1.1e-08 63.5 36 75.0
Solyc05g008820.4 Solanum lycopersicum HOM05D001288 ORTHO05D001123 3.1e-08 62.0 36 75.0
Sopen05g004580 Solanum pennellii HOM05D001288 ORTHO05D001123 3.1e-08 62.0 36 75.0
Nitab4.5_0000694g0080 Nicotiana tabacum HOM05D001288 ORTHO05D001123 2.0e-07 59.3 35 74.3
Nitab4.5_0002112g0160 Nicotiana tabacum HOM05D001288 ORTHO05D001123 2.0e-07 59.3 36 69.4
PGSC0003DMG400030528 Solanum tuberosum HOM05D001288 ORTHO05D001123 2.6e-07 58.9 33 78.8
Solyc05g008810.4 Solanum lycopersicum HOM05D001288 ORTHO05D001123 3.4e-07 58.5 36 69.4
Sopen05g004570 Solanum pennellii HOM05D001288 ORTHO05D001123 3.4e-07 58.5 36 69.4
PGSC0003DMG402030570 Solanum tuberosum HOM05D001288 ORTHO05D001123 3.4e-07 58.5 36 69.4
CiPaw.06G016200 Carya illinoinensis HOM05D001288 ORTHO05D001123 4.5e-07 58.2 36 69.4
Cfa015830 Carpinus fangiana HOM05D001288 ORTHO05D001123 5.9e-07 57.8 36 63.9
Haze_00660 Corylus avellana HOM05D001288 ORTHO05D001123 5.9e-07 57.8 36 63.9
Gohir.A05G315100 Gossypium hirsutum HOM05D001288 ORTHO05D001123 1.0e-06 57.0 36 63.9
Lsat_1_v5_gn_4_14740 Lactuca sativa HOM05D001288 ORTHO05D001123 1.0e-06 57.0 36 63.9
SGA_v2.0_scaffold36G14565 Striga asiatica HOM05D001288 ORTHO05D001123 1.0e-06 57.0 36 61.1
THA.LOC104824156 Tarenaya hassleriana HOM05D001288 ORTHO05D001123 1.0e-06 57.0 36 63.9
FvH4_4g26641 Fragaria vesca HOM05D001288 ORTHO05D001123 1.3e-06 56.6 36 63.9
FAN12G0102 Fragaria x ananassa HOM05D001288 ORTHO05D001123 1.3e-06 56.6 36 63.9
FAN12G2400 Fragaria x ananassa HOM05D001288 ORTHO05D001123 1.3e-06 56.6 36 63.9
HanXRQChr11g0325181 Helianthus annuus HOM05D001288 ORTHO05D001123 1.3e-06 56.6 36 66.7
Carub.0005s0015 Capsella rubella HOM05D001288 ORTHO05D001123 1.7e-06 56.2 36 63.9
CAN.G610.18 Capsicum annuum HOM05D001288 ORTHO05D001123 1.7e-06 56.2 36 61.1
AUR62002802 Chenopodium quinoa HOM05D001288 ORTHO05D001123 1.7e-06 56.2 35 62.9
FvH4_4g26640 Fragaria vesca HOM05D001288 ORTHO05D001123 1.7e-06 56.2 35 62.9
FAN07G1652 Fragaria x ananassa HOM05D001288 ORTHO05D001123 1.7e-06 56.2 35 62.9
FAN17G2789 Fragaria x ananassa HOM05D001288 ORTHO05D001123 1.7e-06 56.2 35 62.9
FAN22G0190 Fragaria x ananassa HOM05D001288 ORTHO05D001123 1.7e-06 56.2 35 62.9
HanXRQChr16g0529201 Helianthus annuus HOM05D001288 ORTHO05D001123 1.7e-06 56.2 35 68.6
Manes.14G107700 Manihot esculenta HOM05D001288 ORTHO05D001123 1.7e-06 56.2 36 61.1
Oeu007191.1 Olea europaea HOM05D001288 ORTHO05D001123 1.7e-06 56.2 36 61.1
Oeu048375.1 Olea europaea HOM05D001288 ORTHO05D001123 1.7e-06 56.2 36 61.1
Rhsim09G0103300 Rhododendron simsii HOM05D001288 ORTHO05D001123 1.7e-06 56.2 36 63.9
SalBow8G0644 Salvia bowleyana HOM05D001288 ORTHO05D001123 1.7e-06 56.2 36 58.3
Atru.chr11.262 Acer truncatum HOM05D001288 ORTHO05D001123 2.2e-06 55.8 36 61.1
Atru.chr11.282 Acer truncatum HOM05D001288 ORTHO05D001123 2.2e-06 55.8 36 61.1
Ciclev10015936m.g Citrus clementina HOM05D001288 ORTHO05D001123 2.2e-06 55.8 36 61.1
COL.COLO4_32107 Corchorus olitorius HOM05D001288 ORTHO05D001123 2.2e-06 55.8 36 61.1
Gohir.D05G316600 Gossypium hirsutum HOM05D001288 ORTHO05D001123 2.2e-06 55.8 36 63.9
Gorai.009G338800 Gossypium raimondii HOM05D001288 ORTHO05D001123 2.2e-06 55.8 36 63.9
Lsat_1_v5_gn_8_42381 Lactuca sativa HOM05D001288 ORTHO05D001123 2.2e-06 55.8 36 61.1
Os01g0693300 Oryza sativa ssp. japonica HOM05D001288 ORTHO05D001123 2.2e-06 55.8 36 58.3
Peaxi162Scf01853g00014 Petunia axillaris HOM05D001288 ORTHO05D001123 2.2e-06 55.8 36 61.1
TAR622G0605 Trochodendron aralioides HOM05D001288 ORTHO05D001123 2.2e-06 55.8 36 61.1
Atru.chr11.251 Acer truncatum HOM05D001288 ORTHO05D001123 2.9e-06 55.5 36 58.3
Atru.chr11.257 Acer truncatum HOM05D001288 ORTHO05D001123 2.9e-06 55.5 36 58.3
Actinidia36343 Actinidia chinensis HOM05D001288 ORTHO05D001123 2.9e-06 55.5 36 58.3
unitig_21.g20022 Utricularia gibba HOM05D001288 ORTHO05D001123 2.9e-06 55.5 36 61.1
CAN.G610.19 Capsicum annuum HOM05D001288 ORTHO05D001123 3.8e-06 55.1 36 63.9
CiPaw.05G243100 Carya illinoinensis HOM05D001288 ORTHO05D001123 3.8e-06 55.1 36 61.1
AUR62014108 Chenopodium quinoa HOM05D001288 ORTHO05D001123 3.8e-06 55.1 36 58.3
Migut.L00674 Erythranthe guttata HOM05D001288 ORTHO05D001123 3.8e-06 55.1 36 58.3
Migut.L01005 Erythranthe guttata HOM05D001288 ORTHO05D001123 3.8e-06 55.1 36 58.3
Medtr1g109400 Medicago truncatula HOM05D001288 ORTHO05D001123 3.8e-06 55.1 36 55.6
Nn3g17966 Nelumbo nucifera HOM05D001288 ORTHO05D001123 3.8e-06 55.1 36 63.9
Nitab4.5_0000694g0180 Nicotiana tabacum HOM05D001288 ORTHO05D001123 3.8e-06 55.1 36 58.3
Nitab4.5_0002112g0170 Nicotiana tabacum HOM05D001288 ORTHO05D001123 3.8e-06 55.1 36 58.3
Rhsim10G0072900 Rhododendron simsii HOM05D001288 ORTHO05D001123 3.8e-06 55.1 36 58.3
PGSC0003DMG401030570 Solanum tuberosum HOM05D001288 ORTHO05D001123 3.8e-06 55.1 36 58.3
Thecc.02G220800 Theobroma cacao HOM05D001288 ORTHO05D001123 3.8e-06 55.1 36 58.3
TWI79G1624 Tripterygium wilfordii HOM05D001288 ORTHO05D001123 3.8e-06 55.1 36 58.3
arahy.Tifrunner.gnm1.ann1.C41ANZ Arachis hypogaea HOM05D001288 ORTHO05D001123 5.0e-06 54.7 36 55.6
arahy.Tifrunner.gnm1.ann1.ZAU2KF Arachis hypogaea HOM05D001288 ORTHO05D001123 5.0e-06 54.7 36 55.6
HanXRQChr08g0213221 Helianthus annuus HOM05D001288 ORTHO05D001123 5.0e-06 54.7 35 62.9
Oeu057763.2 Olea europaea HOM05D001288 ORTHO05D001123 5.0e-06 54.7 36 63.9
Prupe.1G317400 Prunus persica HOM05D001288 ORTHO05D001123 5.0e-06 54.7 36 61.1
RcHm_v2.0_Chr4g0434341 Rosa chinensis HOM05D001288 ORTHO05D001123 5.0e-06 54.7 36 63.9
ATR0681G165 Amborella trichopoda HOM05D001288 ORTHO05D001123 6.5e-06 54.3 36 61.1
AT2G01180 Arabidopsis thaliana HOM05D001288 ORTHO05D001123 6.5e-06 54.3 35 62.9
MSTRG.7637 Avicennia marina HOM05D001288 ORTHO05D001123 6.5e-06 54.3 36 58.3
Ca_06895_v3 Cicer arietinum L. HOM05D001288 ORTHO05D001123 6.5e-06 54.3 36 61.1
ClCG05G022430 Citrullus lanatus HOM05D001288 ORTHO05D001123 6.5e-06 54.3 36 58.3
MELO3C012280.2 Cucumis melo HOM05D001288 ORTHO05D001123 6.5e-06 54.3 36 58.3
CsaV3_5G034650 Cucumis sativus L. HOM05D001288 ORTHO05D001123 6.5e-06 54.3 36 58.3
Dinv16144 Davidia involucrata HOM05D001288 ORTHO05D001123 6.5e-06 54.3 36 58.3
ECA232G0564 Erigeron canadensis HOM05D001288 ORTHO05D001123 6.5e-06 54.3 36 63.9
Glyma.18G293800 Glycine max HOM05D001288 ORTHO05D001123 6.5e-06 54.3 33 66.7
MD13G1034700 Malus domestica HOM05D001288 ORTHO05D001123 6.5e-06 54.3 35 60.0
Potri.010G119300 Populus trichocarpa HOM05D001288 ORTHO05D001123 6.5e-06 54.3 36 58.3
Aqoxy3G00190 Aquilegia oxysepala HOM05D001288 ORTHO05D001123 8.5e-06 53.9 36 61.1
CDE02G1195 Ceratophyllum demersum HOM05D001288 ORTHO05D001123 8.5e-06 53.9 36 58.3
COL.COLO4_32115 Corchorus olitorius HOM05D001288 ORTHO05D001123 8.5e-06 53.9 36 66.7
Dinv33966 Davidia involucrata HOM05D001288 ORTHO05D005456 8.5e-06 53.9 36 58.3
ECA233G2002 Erigeron canadensis HOM05D001288 ORTHO05D001123 8.5e-06 53.9 36 58.3
Glyma.02G089100 Glycine max HOM05D001288 ORTHO05D001123 8.5e-06 53.9 33 66.7
Lj6C752T9 Lonicera japonica HOM05D001288 ORTHO05D001123 8.5e-06 53.9 36 55.6
Manes.14G107600 Manihot esculenta HOM05D001288 ORTHO05D001123 8.5e-06 53.9 36 61.1
Prupe.1G317500 Prunus persica HOM05D001288 ORTHO05D001123 8.5e-06 53.9 35 60.0
Solyc05g008800.4 Solanum lycopersicum HOM05D001288 ORTHO05D001123 8.5e-06 53.9 36 55.6
Sopen05g004560 Solanum pennellii HOM05D001288 ORTHO05D001123 8.5e-06 53.9 36 55.6
TWI31G0052 Tripterygium wilfordii HOM05D001288 ORTHO05D001123 8.5e-06 53.9 36 63.9
vmacro22956 Vaccinium macrocarpon HOM05D001288 ORTHO05D001123 8.5e-06 53.9 36 55.6
HPP92_024320 Vanilla planifolia HOM05D001288 ORTHO05D001123 8.5e-06 53.9 36 58.3


User provided reference genes

Program Settings