Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G619.36 Capsicum annuum HOM05D006839 ORTHO05D007872 7.6e-67 256.9 120 100.0
CAN.G619.39 Capsicum annuum HOM05D006839 ORTHO05D007872 7.4e-62 240.4 120 94.2
PGSC0003DMG400045936 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.9e-57 225.7 120 88.3
PGSC0003DMG400041475 Solanum tuberosum HOM05D006839 ORTHO05D007872 3.5e-56 221.5 113 92.0
Peaxi162Scf00681g00001 Petunia axillaris HOM05D006839 ORTHO05D007872 2.2e-45 185.7 119 71.4
Peaxi162Scf00681g00007 Petunia axillaris HOM05D006839 ORTHO05D007872 2.0e-43 179.1 111 75.7
PGSC0003DMG400046937 Solanum tuberosum HOM05D006839 ORTHO05D007872 5.5e-41 171.0 121 64.5
Solyc04g026140.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 1.6e-40 169.5 118 66.1
Nitab4.5_0006691g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.7e-40 168.7 118 66.9
Nitab4.5_0000771g0190 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.1e-38 163.3 93 79.6
CAN.G619.35 Capsicum annuum HOM05D006839 ORTHO05D007872 1.8e-36 156.0 107 68.2
Nitab4.5_0009973g0050 Nicotiana tabacum HOM05D006839 ORTHO05D007872 4.2e-33 144.8 119 59.7
Nitab4.5_0006691g0070 Nicotiana tabacum HOM05D006839 ORTHO05D007872 5.5e-33 144.4 116 61.2
Peaxi162Scf00681g00002 Petunia axillaris HOM05D006839 ORTHO05D007872 6.1e-32 141.0 104 61.5
Nitab4.5_0000771g0180 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.3e-31 139.0 119 57.1
Nitab4.5_0000003g0350 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.8e-29 132.1 119 61.3
Oeu022880.1 Olea europaea HOM05D006839 ORTHO05D007872 1.4e-28 129.8 116 52.6
Nitab4.5_0009973g0030 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.4e-28 129.0 100 60.0
FvH4_2g23730 Fragaria vesca HOM05D006839 ORTHO05D007872 1.6e-27 126.3 117 49.6
CSS0014698 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 7.7e-27 124.0 112 52.7
CSS0016717 Camellia sinensis var. sinensis HOM05D006839 ORTHO05D007872 7.7e-27 124.0 112 52.7
Aqoxy2G03292 Aquilegia oxysepala HOM05D006839 ORTHO05D007872 1.0e-26 123.6 116 50.9
Haze_04725 Corylus avellana HOM05D006839 ORTHO05D007872 1.0e-26 123.6 118 50.0
FAN24G3533 Fragaria x ananassa HOM05D006839 ORTHO05D007872 1.0e-26 123.6 117 48.7
RcHm_v2.0_Chr6g0291211 Rosa chinensis HOM05D006839 ORTHO05D007872 1.3e-26 123.2 117 48.7
Cpa.g.sc52.24 Carica papaya HOM05D006839 ORTHO05D007872 5.0e-26 121.3 115 51.3
Duzib211G0653 Durio zibethinus HOM05D006839 ORTHO05D007872 5.0e-26 121.3 115 51.3
Lsat_1_v5_gn_5_190060 Lactuca sativa HOM05D006839 ORTHO05D007872 5.0e-26 121.3 113 51.3
Migut.N02163 Erythranthe guttata HOM05D006839 ORTHO05D007872 6.5e-26 120.9 110 48.2
Manes.05G075300 Manihot esculenta HOM05D006839 ORTHO05D007872 6.5e-26 120.9 113 51.3
vmacro14927 Vaccinium macrocarpon HOM05D000265 ORTHO05D000161 6.5e-26 120.9 115 50.4
MD11G1287200 Malus domestica HOM05D006839 ORTHO05D007872 1.1e-25 120.2 118 48.3
TWI59G1109 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 1.5e-25 119.8 116 49.1
Solyc09g065040.1 Solanum lycopersicum HOM05D006839 ORTHO05D007872 2.5e-25 119.0 120 50.8
Sopen09g026780 Solanum pennellii HOM05D006839 ORTHO05D007872 4.2e-25 118.2 120 50.8
SalBow4G2140 Salvia bowleyana HOM05D006839 ORTHO05D007872 5.5e-25 117.9 109 51.4
Hma1.2p1_0257F.1_g103610 Hydrangea macrophylla HOM05D000265 ORTHO05D007872 7.2e-25 117.5 108 50.9
ECA248G0593 Erigeron canadensis HOM05D006839 ORTHO05D007872 1.2e-24 116.7 112 50.0
TAR636G2925 Trochodendron aralioides HOM05D006839 ORTHO05D007872 1.2e-24 116.7 120 49.2
Gorai.007G136000 Gossypium raimondii HOM05D006839 ORTHO05D007872 1.6e-24 116.3 114 48.2
PGSC0003DMG400039700 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.6e-24 116.3 113 52.2
PGSC0003DMG402026866 Solanum tuberosum HOM05D006839 ORTHO05D007872 1.6e-24 116.3 113 52.2
Atru.chr5.1418 Acer truncatum HOM05D006839 ORTHO05D007872 2.1e-24 115.9 111 49.5
Nitab4.5_0001028g0040 Nicotiana tabacum HOM05D006839 ORTHO05D007872 2.7e-24 115.5 115 51.3
Gohir.A11G122100 Gossypium hirsutum HOM05D006839 ORTHO05D007872 4.7e-24 114.8 114 47.4
Gohir.D11G127300 Gossypium hirsutum HOM05D006839 ORTHO05D007872 4.7e-24 114.8 114 47.4
Gohir.D11G127350 Gossypium hirsutum HOM05D006839 ORTHO05D007872 4.7e-24 114.8 114 47.4
Prupe.8G242500 Prunus persica HOM05D006839 ORTHO05D007872 4.7e-24 114.8 117 46.2
Cc01_g19590 Coffea canephora HOM05D006839 ORTHO05D007872 8.0e-24 114.0 114 50.9
Migut.D00285 Erythranthe guttata HOM05D006839 ORTHO05D007872 1.0e-23 113.6 109 48.6
FAN27G2541 Fragaria x ananassa HOM05D006839 ORTHO05D007872 1.0e-23 113.6 112 47.3
MBI19_g14316_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 1.0e-23 113.6 113 46.9
MBI19_g46647_MAGBIO Magnolia biondii HOM05D006839 ORTHO05D007872 1.0e-23 113.6 113 46.9
Potri.005G208400 Populus trichocarpa HOM05D006839 ORTHO05D007872 1.0e-23 113.6 111 48.6
PGR119G0017 Punica granatum HOM05D006839 ORTHO05D007872 1.4e-23 113.2 116 48.3
FAN15G1162 Fragaria x ananassa HOM05D006839 ORTHO05D007872 1.8e-23 112.8 112 47.3
CsaV3_6G037040 Cucumis sativus L. HOM05D006839 ORTHO05D007872 2.3e-23 112.5 115 47.8
Nn1g02187 Nelumbo nucifera HOM05D006839 ORTHO05D007872 2.3e-23 112.5 121 47.1
Thecc.01G280800 Theobroma cacao HOM05D006839 ORTHO05D007872 2.3e-23 112.5 107 51.4
Ciclev10023291m.g Citrus clementina HOM05D006839 ORTHO05D007872 3.0e-23 112.1 116 48.3
Eucgr.K03376 Eucalyptus grandis HOM05D006839 ORTHO05D007872 3.0e-23 112.1 112 48.2
SalBow6G6528 Salvia bowleyana HOM05D006839 ORTHO05D007872 5.2e-23 111.3 110 44.5
MELO3C014411.2 Cucumis melo HOM05D006839 ORTHO05D007872 8.8e-23 110.5 115 47.0
VMungo1383G1584 Vigna mungo HOM05D006839 ORTHO05D007872 1.2e-22 110.2 120 46.7
TWI14G1288 Tripterygium wilfordii HOM05D006839 ORTHO05D007872 1.5e-22 109.8 119 44.5
FAN20G2906 Fragaria x ananassa HOM05D006839 ORTHO05D007872 2.0e-22 109.4 112 46.4
Phvul.001G150100 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 2.0e-22 109.4 120 45.8
Glyma.19G155100 Glycine max HOM05D006839 ORTHO05D007872 3.3e-22 108.6 109 51.4
SalBow6G2151 Salvia bowleyana HOM05D006839 ORTHO05D007872 4.4e-22 108.2 107 44.9
Migut.N02162 Erythranthe guttata HOM05D006839 ORTHO05D007872 5.7e-22 107.8 112 46.4
Lj1g0018770 Lotus japonicus HOM05D006839 ORTHO05D007872 1.3e-21 106.7 119 45.4
Cfa006129 Carpinus fangiana HOM05D006839 ORTHO05D007872 1.7e-21 106.3 111 45.9
Medtr7g094760 Medicago truncatula HOM05D006839 ORTHO05D007872 3.7e-21 105.1 115 47.8
CiPaw.08G104600 Carya illinoinensis HOM05D006839 ORTHO05D007872 8.3e-21 104.0 118 43.2
Glyma.02G148000 Glycine max HOM05D006839 ORTHO05D007872 1.1e-20 103.6 114 43.9
Glyma.10G025800 Glycine max HOM05D006839 ORTHO05D007872 1.1e-20 103.6 116 44.8
SEGI_06174 Sequoiadendron giganteum HOM05D006839 ORTHO05D007872 1.1e-20 103.6 118 44.9
ATR0626G183 Amborella trichopoda HOM05D006839 ORTHO05D007872 1.4e-20 103.2 113 46.0
VMungo0720G2173 Vigna mungo HOM05D006839 ORTHO05D007872 2.4e-20 102.4 107 47.7
Eucgr.A00826 Eucalyptus grandis HOM05D006839 ORTHO05D007872 9.1e-20 100.5 108 43.5
Phvul.007G171000 Phaseolus vulgaris HOM05D006839 ORTHO05D007872 9.1e-20 100.5 107 46.7
Sed0018644 Sechium edule HOM05D006839 ORTHO05D007872 2.7e-19 99.0 112 42.0
Eucgr.H00898 Eucalyptus grandis HOM05D006839 ORTHO05D007872 5.9e-19 97.8 120 40.8
Eucgr.L02237 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.7e-18 96.3 118 38.1
SalBow6G0334 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.9e-18 95.5 109 39.4
Sabra05G0158500 Salix brachista HOM05D006839 ORTHO05D007872 8.5e-18 94.0 102 43.1
SalBow7G1292 Salvia bowleyana HOM05D006839 ORTHO05D007872 8.5e-18 94.0 109 43.1
Eucgr.L02238 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.1e-17 93.6 120 38.3
PGR083G1544 Punica granatum HOM05D006839 ORTHO05D007872 1.5e-17 93.2 111 42.3
Rhsim01G0275200 Rhododendron simsii HOM05D006839 ORTHO05D007872 1.5e-17 93.2 93 49.5
SalBow6G4286 Salvia bowleyana HOM05D006839 ORTHO05D007872 2.7e-16 89.0 110 40.0
SalBow6G5378 Salvia bowleyana HOM05D006839 ORTHO05D007872 3.6e-16 88.6 107 37.4
Eucgr.A00847 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.4e-15 86.7 113 40.7
Nitab4.5_0000771g0200 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.4e-15 86.7 103 46.6
Peaxi162Scf00681g00011 Petunia axillaris HOM05D006839 ORTHO05D007872 2.3e-15 85.9 65 63.1
Glyma.03G152600 Glycine max HOM05D006839 ORTHO05D007872 1.5e-14 83.2 111 43.2
SalBow6G6538 Salvia bowleyana HOM05D006839 ORTHO05D007872 3.4e-14 82.0 109 35.8
HPP92_001336 Vanilla planifolia HOM05D006839 ORTHO05D007872 4.4e-14 81.6 100 42.0
Eucgr.H01539 Eucalyptus grandis HOM05D006839 ORTHO05D007872 5.7e-14 81.3 112 35.7
PGR119G1259 Punica granatum HOM05D006839 ORTHO05D007872 1.3e-13 80.1 104 34.6
Eucgr.A00843 Eucalyptus grandis HOM05D006839 ORTHO05D007872 6.3e-13 77.8 93 40.9
Eucgr.L00883 Eucalyptus grandis HOM05D006839 ORTHO05D007872 1.4e-12 76.6 82 43.9
PGR083G0613 Punica granatum HOM05D006839 ORTHO05D007872 4.5e-11 71.6 114 33.3
PGR084G0009 Punica granatum HOM05D006839 ORTHO05D007872 4.5e-11 71.6 117 31.6
PGR142G2474 Punica granatum HOM05D006839 ORTHO05D007872 4.5e-11 71.6 117 31.6
PGR031G2486 Punica granatum HOM05D023640 ORTHO05D019592 5.0e-10 68.2 97 39.2
PGR031G1999 Punica granatum HOM05D006839 ORTHO05D007872 3.3e-09 65.5 119 33.6
Actinidia21107 Actinidia chinensis HOM05D000265 ORTHO05D000161 7.2e-09 64.3 55 60.0
PGR142G4476 Punica granatum HOM05D006839 ORTHO05D007872 1.6e-08 63.2 120 32.5
Nitab4.5_0006691g0040 Nicotiana tabacum HOM05D006839 ORTHO05D007872 1.4e-07 60.1 86 38.4
PGR031G1100 Punica granatum HOM05D023640 ORTHO05D007872 3.0e-07 58.9 94 36.2
TWI38G0054 Tripterygium wilfordii HOM05D000022 ORTHO05D000071 4.0e-07 58.5 57 49.1
AagrBONN_evm.TU.Sc2ySwM_344.1627 Anthoceros agrestis HOM05D032606 ORTHO05D007872 1.2e-06 57.0 108 27.8
AagrBONN_evm.TU.Sc2ySwM_344.1661 Anthoceros agrestis HOM05D058811 ORTHO05D019592 1.2e-06 57.0 107 31.8
ATR0317G055 Amborella trichopoda HOM05D000022 ORTHO05D000306 2.6e-06 55.8 105 31.4
Haze_19045 Corylus avellana HOM05D000022 ORTHO05D000306 2.6e-06 55.8 52 42.3


User provided reference genes

Program Settings