Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G612.11 Capsicum annuum HOM05D005304 ORTHO05D004438 1.1e-60 236.5 120 100.0
PGSC0003DMG400016914 Solanum tuberosum HOM05D005304 ORTHO05D004438 1.1e-41 173.3 124 76.6
Solyc03g071710.1 Solanum lycopersicum HOM05D005304 ORTHO05D004438 2.5e-41 172.2 121 77.7
Sopen03g019970 Solanum pennellii HOM05D005304 ORTHO05D004438 2.5e-41 172.2 121 77.7
Nitab4.5_0000107g0230 Nicotiana tabacum HOM05D005304 ORTHO05D004438 1.7e-21 106.3 100 61.0
Oeu059829.1 Olea europaea HOM05D005304 ORTHO05D004438 8.3e-21 104.0 121 51.2
Oeu032435.1 Olea europaea HOM05D005304 ORTHO05D004438 1.1e-20 103.6 120 53.3
Nitab4.5_0000593g0370 Nicotiana tabacum HOM05D005304 ORTHO05D004438 9.1e-20 100.5 122 50.0
MSTRG.27507 Avicennia marina HOM05D005304 ORTHO05D004438 2.1e-16 89.4 121 44.6
PGSC0003DMG400023483 Solanum tuberosum HOM05D005304 ORTHO05D004438 2.0e-14 82.8 123 48.0
Potri.008G029600 Populus trichocarpa HOM05D005304 ORTHO05D004438 4.4e-14 81.6 101 45.5
Manes.07G093500 Manihot esculenta HOM05D005304 ORTHO05D004438 5.7e-14 81.3 113 44.2
Cfa001771 Carpinus fangiana HOM05D005304 ORTHO05D004438 7.5e-14 80.9 75 54.7
Duzib128G0830 Durio zibethinus HOM05D005304 ORTHO05D004438 1.3e-13 80.1 118 37.3
Sopen05g033870 Solanum pennellii HOM05D005304 ORTHO05D004438 1.3e-13 80.1 113 47.8
Cc02_g10500 Coffea canephora HOM05D005304 ORTHO05D004438 1.7e-13 79.7 133 42.1
Duzib114G0655 Durio zibethinus HOM05D005304 ORTHO05D004438 2.8e-13 79.0 100 48.0
Lsat_1_v5_gn_8_22700 Lactuca sativa HOM05D005304 ORTHO05D004438 1.1e-12 77.0 123 43.1
Sabra08G0019800 Salix brachista HOM05D005304 ORTHO05D004438 1.1e-12 77.0 102 44.1
CSS0003867 Camellia sinensis var. sinensis HOM05D017072 ORTHO05D004438 1.4e-12 76.6 110 44.5
Haze_16785 Corylus avellana HOM05D005304 ORTHO05D004438 1.4e-12 76.6 125 39.2
Migut.F01597 Erythranthe guttata HOM05D005304 ORTHO05D004438 1.4e-12 76.6 97 44.3
COL.COLO4_32872 Corchorus olitorius HOM05D005304 ORTHO05D004438 1.8e-12 76.3 131 38.9
Psat6g173960 Pisum sativum HOM05D005304 ORTHO05D004438 3.1e-12 75.5 62 53.2
CsaV3_2G032750 Cucumis sativus L. HOM05D005304 ORTHO05D004438 7.0e-12 74.3 123 43.1
QL08p052941 Quercus lobata HOM05D005304 ORTHO05D004438 7.0e-12 74.3 72 54.2
Rhsim03G0110900 Rhododendron simsii HOM05D005304 ORTHO05D004438 7.0e-12 74.3 108 44.4
TAR636G3524 Trochodendron aralioides HOM05D005304 ORTHO05D004438 7.0e-12 74.3 100 45.0
Ca_10460_v3 Cicer arietinum L. HOM05D005304 ORTHO05D004438 9.1e-12 73.9 69 47.8
ClCG08G007940 Citrullus lanatus HOM05D005304 ORTHO05D004438 9.1e-12 73.9 107 44.9
Duzib128G0918 Durio zibethinus HOM05D005304 ORTHO05D004438 9.1e-12 73.9 118 36.4
Lalb_Chr06g0170051 Lupinus albus HOM05D005304 ORTHO05D004438 1.2e-11 73.6 87 43.7
PGSC0003DMG400027330 Solanum tuberosum HOM05D005304 ORTHO05D004438 1.2e-11 73.6 115 44.3
MELO3C019852.2 Cucumis melo HOM05D005304 ORTHO05D004438 1.6e-11 73.2 122 41.0
Sed0018085 Sechium edule HOM05D005304 ORTHO05D004438 1.6e-11 73.2 126 40.5
SalBow4G2705 Salvia bowleyana HOM05D005304 ORTHO05D004438 2.0e-11 72.8 100 43.0
TAR623G1332 Trochodendron aralioides HOM05D005304 ORTHO05D004438 2.0e-11 72.8 118 42.4
VMungo0720G0262 Vigna mungo HOM05D005304 ORTHO05D004438 2.0e-11 72.8 60 53.3
Solyc11g007860.1 Solanum lycopersicum HOM05D005304 ORTHO05D004438 2.7e-11 72.4 119 45.4
Lalb_Chr02g0151151 Lupinus albus HOM05D005304 ORTHO05D004438 3.5e-11 72.0 96 41.7
Thecc.10G090600 Theobroma cacao HOM05D005304 ORTHO05D004438 3.5e-11 72.0 112 40.2
TPR.G37843 Trifolium pratense HOM05D005304 ORTHO05D004438 3.5e-11 72.0 69 47.8
Sopen11g003720 Solanum pennellii HOM05D005304 ORTHO05D004438 4.5e-11 71.6 120 42.5
Gohir.A01G128800 Gossypium hirsutum HOM05D005304 ORTHO05D004438 5.9e-11 71.2 119 38.7
Medtr1g090837 Medicago truncatula HOM05D005304 ORTHO05D004438 5.9e-11 71.2 103 37.9
CiPaw.01G264700 Carya illinoinensis HOM05D005304 ORTHO05D004438 7.7e-11 70.9 113 42.5
Nn2g13894 Nelumbo nucifera HOM05D005304 ORTHO05D004438 7.7e-11 70.9 118 39.8
CiPaw.02G169800 Carya illinoinensis HOM05D005304 ORTHO05D004438 1.0e-10 70.5 123 39.0
Lj5g0009089 Lotus japonicus HOM05D005304 ORTHO05D004438 1.0e-10 70.5 63 52.4
Phvul.007G141600 Phaseolus vulgaris HOM05D005304 ORTHO05D004438 1.0e-10 70.5 54 55.6
Sed0010031 Sechium edule HOM05D005304 ORTHO05D004438 1.0e-10 70.5 111 42.3
Nn6g35176 Nelumbo nucifera HOM05D005304 ORTHO05D004438 1.7e-10 69.7 80 45.0
SalBow6G1975 Salvia bowleyana HOM05D005304 ORTHO05D004438 1.7e-10 69.7 122 39.3
Gohir.D01G118400 Gossypium hirsutum HOM05D005304 ORTHO05D004438 2.9e-10 68.9 119 37.8
Gorai.002G144400 Gossypium raimondii HOM05D005304 ORTHO05D004438 2.9e-10 68.9 119 37.8
Potri.010G231600 Populus trichocarpa HOM05D005304 ORTHO05D004438 2.9e-10 68.9 103 40.8
Gohir.D04G021300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 3.8e-10 68.6 73 46.6
Gorai.012G025400 Gossypium raimondii HOM05D005304 ORTHO05D004438 3.8e-10 68.6 82 43.9
PGR044G1405 Punica granatum HOM05D005304 ORTHO05D004438 5.0e-10 68.2 113 38.1
Sabra10G0179600 Salix brachista HOM05D005304 ORTHO05D004438 5.0e-10 68.2 105 39.0
Migut.F01894 Erythranthe guttata HOM05D005304 ORTHO05D004438 6.6e-10 67.8 120 37.5
Glyma.10G199500 Glycine max HOM05D005304 ORTHO05D004438 6.6e-10 67.8 54 57.4
Gohir.A05G393600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 6.6e-10 67.8 82 43.9
Manes.10G053200 Manihot esculenta HOM05D005304 ORTHO05D004438 6.6e-10 67.8 121 40.5
TAR633G0523 Trochodendron aralioides HOM05D005304 ORTHO05D004438 6.6e-10 67.8 100 42.0
Gohir.A05G290700 Gossypium hirsutum HOM05D005304 ORTHO05D004438 8.6e-10 67.4 119 40.3
CANSAT56G0274 Cannabis sativa HOM05D005304 ORTHO05D004438 1.1e-09 67.0 90 45.6
CAN.G135.30 Capsicum annuum HOM05D021137 ORTHO05D004438 1.1e-09 67.0 120 37.5
Glyma.20G190800 Glycine max HOM05D005304 ORTHO05D004438 1.5e-09 66.6 54 57.4
Gohir.D05G291900 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.5e-09 66.6 118 39.8
Gorai.009G307700 Gossypium raimondii HOM05D005304 ORTHO05D004438 1.9e-09 66.2 121 38.0
QL03p021677 Quercus lobata HOM05D005304 ORTHO05D004438 1.9e-09 66.2 130 36.9
Lsat_1_v5_gn_9_70641 Lactuca sativa HOM05D005304 ORTHO05D004438 2.5e-09 65.9 123 38.2
Duzib168G0406 Durio zibethinus HOM05D005304 ORTHO05D004438 3.3e-09 65.5 80 50.0
Atru.chr12.921 Acer truncatum HOM05D005304 ORTHO05D004438 4.2e-09 65.1 142 37.3
Aqoxy2G01602 Aquilegia oxysepala HOM05D005304 ORTHO05D004438 4.2e-09 65.1 116 37.1
Gorai.009G089100 Gossypium raimondii HOM05D005304 ORTHO05D004438 7.2e-09 64.3 87 41.4
Gohir.A05G084500 Gossypium hirsutum HOM05D005304 ORTHO05D004438 9.5e-09 63.9 82 42.7
Gohir.D05G087300 Gossypium hirsutum HOM05D005304 ORTHO05D004438 9.5e-09 63.9 82 42.7
QL03p011649 Quercus lobata HOM05D005304 ORTHO05D004438 1.6e-08 63.2 112 36.6
TAR369G0323 Trochodendron aralioides HOM05D001401 ORTHO05D002222 1.6e-08 63.2 100 42.0
TWI63G0695 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 2.1e-08 62.8 117 40.2
Duzib150G0717 Durio zibethinus HOM05D005304 ORTHO05D004438 2.8e-08 62.4 80 47.5
RcHm_v2.0_Chr1g0336411 Rosa chinensis HOM05D005304 ORTHO05D004438 2.8e-08 62.4 66 50.0
MSTRG.9124 Avicennia marina HOM05D005304 ORTHO05D004438 3.6e-08 62.0 96 37.5
PGR044G0041 Punica granatum HOM05D005304 ORTHO05D004438 4.7e-08 61.6 65 44.6
TWI38G0392 Tripterygium wilfordii HOM05D005304 ORTHO05D004438 6.1e-08 61.2 122 36.1
Lalb_Chr19g0129331 Lupinus albus HOM05D005304 ORTHO05D004438 1.0e-07 60.5 53 52.8
FvH4_7g06790 Fragaria vesca HOM05D005304 ORTHO05D004438 1.4e-07 60.1 105 36.2
FAN03G1417 Fragaria x ananassa HOM05D005304 ORTHO05D004438 1.4e-07 60.1 103 37.9
FAN06G1004 Fragaria x ananassa HOM05D005304 ORTHO05D004438 1.4e-07 60.1 105 36.2
FAN10G3090 Fragaria x ananassa HOM05D005304 ORTHO05D004438 1.4e-07 60.1 105 36.2
Potri.010G231700 Populus trichocarpa HOM05D005304 ORTHO05D004438 1.8e-07 59.7 57 57.9
ClCG05G021460 Citrullus lanatus HOM05D005304 ORTHO05D004438 3.0e-07 58.9 108 37.0
FAN01G2164 Fragaria x ananassa HOM05D005304 ORTHO05D004438 3.0e-07 58.9 102 33.3
Manes.10G053300 Manihot esculenta HOM05D005304 ORTHO05D004438 3.0e-07 58.9 107 41.1
Thecc.09G296200 Theobroma cacao HOM05D005304 ORTHO05D004438 3.0e-07 58.9 82 46.3
Cpa.g.sc128.74 Carica papaya HOM05D005304 ORTHO05D004438 4.0e-07 58.5 102 41.2
FAN10G0320 Fragaria x ananassa HOM05D005304 ORTHO05D004438 6.8e-07 57.8 92 37.0
Manes.11G153500 Manihot esculenta HOM05D005304 ORTHO05D004438 6.8e-07 57.8 121 30.6
Solyc11g007880.1 Solanum lycopersicum HOM05D021137 ORTHO05D004438 6.8e-07 57.8 120 34.2
SHI54636 Sapria himalayana HOM05D005304 ORTHO05D004438 8.9e-07 57.4 69 40.6
Gohir.D07G109600 Gossypium hirsutum HOM05D005304 ORTHO05D004438 1.2e-06 57.0 83 43.4
Nitab4.5_0001163g0010 Nicotiana tabacum HOM05D005304 ORTHO05D004438 1.2e-06 57.0 55 52.7
Sopen11g003740 Solanum pennellii HOM05D021137 ORTHO05D004438 1.2e-06 57.0 120 35.0
Sed0009329 Sechium edule HOM05D005304 ORTHO05D004438 1.5e-06 56.6 58 44.8
PGSC0003DMG400027332 Solanum tuberosum HOM05D021137 ORTHO05D004438 1.5e-06 56.6 118 34.7
CSS0034177 Camellia sinensis var. sinensis HOM05D005304 ORTHO05D004438 2.6e-06 55.8 75 45.3
Eucgr.B03916 Eucalyptus grandis HOM05D005304 ORTHO05D004438 2.6e-06 55.8 113 31.9
Eucgr.J01033 Eucalyptus grandis HOM05D005304 ORTHO05D004438 2.6e-06 55.8 98 40.8
Lalb_Chr03g0036331 Lupinus albus HOM05D005304 ORTHO05D004438 2.6e-06 55.8 103 35.9
QL01p014739 Quercus lobata HOM05D005304 ORTHO05D004438 2.6e-06 55.8 85 38.8
Sopen11g003730 Solanum pennellii HOM05D021137 ORTHO05D004438 2.6e-06 55.8 104 34.6
CiPaw.13G144100 Carya illinoinensis HOM05D005304 ORTHO05D004438 3.4e-06 55.5 85 38.8
DCAR_019059 Daucus carota HOM05D005304 ORTHO05D004438 3.4e-06 55.5 104 43.3
Potri.009G003400 Populus trichocarpa HOM05D005304 ORTHO05D004438 3.4e-06 55.5 121 33.9
CsaV3_5G035790 Cucumis sativus L. HOM05D005304 ORTHO05D004438 4.4e-06 55.1 100 33.0
Prupe.2G095100 Prunus persica HOM05D005304 ORTHO05D004438 4.4e-06 55.1 74 43.2
FAN02G4580 Fragaria x ananassa HOM05D005304 ORTHO05D004438 5.7e-06 54.7 94 36.2
Ciclev10033091m.g Citrus clementina HOM05D005304 ORTHO05D004438 9.8e-06 53.9 74 40.5
MELO3C012381.2 Cucumis melo HOM05D005304 ORTHO05D004438 9.8e-06 53.9 99 30.3
FAN12G4274 Fragaria x ananassa HOM05D005304 ORTHO05D004438 9.8e-06 53.9 94 36.2
Prupe.6G114400 Prunus persica HOM05D005304 ORTHO05D004438 9.8e-06 53.9 94 37.2


User provided reference genes

Program Settings