Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G610.44 Capsicum annuum HOM05D000764 ORTHO05D004953 2.3e-182 642.1 324 100.0
CAN.G1237.43 Capsicum annuum HOM05D000764 ORTHO05D004953 2.0e-138 496.1 298 85.6
Solyc04g039950.4 Solanum lycopersicum HOM05D000764 ORTHO05D004953 3.8e-129 465.3 294 79.6
Sopen04g010120 Solanum pennellii HOM05D000764 ORTHO05D004953 7.2e-128 461.1 294 79.6
Nitab4.5_0003134g0150 Nicotiana tabacum HOM05D000764 ORTHO05D004953 1.2e-127 460.3 296 78.7
Nitab4.5_0000799g0100 Nicotiana tabacum HOM05D000764 ORTHO05D004953 1.0e-126 457.2 294 77.9
Nitab4.5_0005544g0060 Nicotiana tabacum HOM05D000764 ORTHO05D004953 1.8e-126 456.4 294 77.6
Peaxi162Scf00970g00016 Petunia axillaris HOM05D000764 ORTHO05D004953 1.5e-122 443.4 294 74.8
CAN.G1237.21 Capsicum annuum HOM05D000764 ORTHO05D004953 3.5e-106 389.0 242 82.6
CAN.G1237.45 Capsicum annuum HOM05D000764 ORTHO05D004953 1.0e-97 360.9 295 69.2
Cc01_g00030 Coffea canephora HOM05D000764 ORTHO05D004953 1.0e-86 324.3 296 57.8
Dinv06519 Davidia involucrata HOM05D000764 ORTHO05D004953 1.2e-82 310.8 300 56.0
GSVIVG01025465001 Vitis vinifera HOM05D000764 ORTHO05D004953 1.3e-81 307.4 297 56.6
CSS0037597 Camellia sinensis var. sinensis HOM05D000764 ORTHO05D004953 1.7e-81 307.0 297 56.6
Dinv33723 Davidia involucrata HOM05D000764 ORTHO05D004953 1.7e-81 307.0 300 56.3
TAR623G0710 Trochodendron aralioides HOM05D000764 ORTHO05D004953 1.9e-80 303.5 296 55.4
Haze_22943 Corylus avellana HOM05D000764 ORTHO05D004953 7.3e-80 301.6 298 56.0
Cfa009565 Carpinus fangiana HOM05D000764 ORTHO05D004953 2.1e-79 300.1 298 55.7
CiPaw.13G176800 Carya illinoinensis HOM05D000764 ORTHO05D004953 2.8e-79 299.7 301 54.5
Potri.001G004200 Populus trichocarpa HOM05D000764 ORTHO05D004953 1.1e-78 297.7 293 57.0
Rhsim03G0149100 Rhododendron simsii HOM05D000764 ORTHO05D004953 1.1e-78 297.7 306 53.6
Sabra01G0002900 Salix brachista HOM05D000764 ORTHO05D004953 4.0e-78 295.8 295 55.9
FAN21G0270 Fragaria x ananassa HOM05D000764 ORTHO05D004953 7.5e-77 291.6 300 53.7
RcHm_v2.0_Chr5g0083741 Rosa chinensis HOM05D000764 ORTHO05D004953 1.7e-76 290.4 298 55.4
MSTRG.16793 Avicennia marina HOM05D000764 ORTHO05D004953 2.9e-76 289.7 294 53.7
Atru.chr3.2095 Acer truncatum HOM05D000764 ORTHO05D004953 4.9e-76 288.9 298 55.0
MBI11_g24613_MAGBIO Magnolia biondii HOM05D000764 ORTHO05D004953 4.9e-76 288.9 301 52.2
TWI32G0740 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 1.9e-75 287.0 299 52.8
Duzib128G0342 Durio zibethinus HOM05D000764 ORTHO05D004953 3.2e-75 286.2 298 54.0
FAN16G0168 Fragaria x ananassa HOM05D000764 ORTHO05D004953 3.2e-75 286.2 300 53.7
Thecc.05G133300 Theobroma cacao HOM05D000764 ORTHO05D004953 4.1e-75 285.8 298 53.0
TWI60G0851 Tripterygium wilfordii HOM05D000764 ORTHO05D004953 4.1e-75 285.8 302 52.6
FAN11G0762 Fragaria x ananassa HOM05D000764 ORTHO05D004953 4.6e-74 282.3 300 53.0
Potri.003G220800 Populus trichocarpa HOM05D000764 ORTHO05D004953 1.0e-73 281.2 293 54.3
Manes.14G121800 Manihot esculenta HOM05D000764 ORTHO05D004953 1.3e-73 280.8 299 54.5
Phvul.001G269300 Phaseolus vulgaris HOM05D000764 ORTHO05D004953 2.3e-73 280.0 300 51.0
vmacro06919 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 6.6e-73 278.5 316 50.9
arahy.Tifrunner.gnm1.ann1.W7TQKX Arachis hypogaea HOM05D000764 ORTHO05D004953 8.6e-73 278.1 308 49.7
QL01p009034 Quercus lobata HOM05D000764 ORTHO05D004953 8.6e-73 278.1 293 52.9
arahy.Tifrunner.gnm1.ann1.ML2TY5 Arachis hypogaea HOM05D000764 ORTHO05D004953 1.1e-72 277.7 308 49.4
SGA_v2.0_scaffold58G20565 Striga asiatica HOM05D000764 ORTHO05D004953 1.5e-72 277.3 293 52.2
Lj6g0018726 Lotus japonicus HOM05D000764 ORTHO05D004953 1.9e-72 276.9 298 50.0
Lj2A763G35 Lonicera japonica HOM05D000764 ORTHO05D004953 2.5e-72 276.6 357 47.3
Migut.L00381 Erythranthe guttata HOM05D000764 ORTHO05D004953 3.3e-72 276.2 293 51.5
MD03G1004100 Malus domestica HOM05D000764 ORTHO05D004953 9.5e-72 274.6 298 51.7
Gohir.D08G248200 Gossypium hirsutum HOM05D000764 ORTHO05D004953 1.2e-71 274.2 290 51.7
Gorai.004G264800 Gossypium raimondii HOM05D000764 ORTHO05D004953 1.2e-71 274.2 290 51.7
Sabra03G0164300 Salix brachista HOM05D000764 ORTHO05D004953 2.1e-71 273.5 293 53.9
Oeu021897.1 Olea europaea HOM05D000764 ORTHO05D004953 2.8e-71 273.1 334 47.9
Ciclev10014014m.g Citrus clementina HOM05D000764 ORTHO05D004953 3.6e-71 272.7 297 54.5
FvH4_3g45550 Fragaria vesca HOM05D000764 ORTHO05D004953 4.7e-71 272.3 300 52.0
Gohir.A08G227900 Gossypium hirsutum HOM05D000764 ORTHO05D004953 6.2e-71 271.9 290 51.4
Hund07595 Selenicereus undatus HOM05D000764 ORTHO05D004953 1.4e-70 270.8 296 49.3
Prupe.6G003600 Prunus persica HOM05D000764 ORTHO05D004953 2.3e-70 270.0 298 52.0
CANSAT11G1226 Cannabis sativa HOM05D000764 ORTHO05D004953 3.1e-70 269.6 304 52.3
PGR119G0322 Punica granatum HOM05D000764 ORTHO05D004953 1.5e-69 267.3 280 52.5
FAN25G3812 Fragaria x ananassa HOM05D000764 ORTHO05D004953 2.6e-69 266.5 300 52.0
Glyma.18G000100 Glycine max HOM05D000764 ORTHO05D004953 6.4e-68 261.9 301 48.8
Sc21g0002730 Simmondsia chinensis HOM05D000764 ORTHO05D004953 2.4e-67 260.0 294 49.7
Eucgr.J01768 Eucalyptus grandis HOM05D000764 ORTHO05D004953 6.0e-66 255.4 305 50.2
HanXRQChr13g0405791 Helianthus annuus HOM05D000764 ORTHO05D004953 6.0e-66 255.4 295 50.5
ECA233G5672 Erigeron canadensis HOM05D000764 ORTHO05D004953 1.7e-65 253.8 294 50.3
Lalb_Chr23g0278471 Lupinus albus HOM05D000764 ORTHO05D004953 3.0e-65 253.1 295 48.5
Ca_16376_v3 Cicer arietinum L. HOM05D000764 ORTHO05D004953 1.1e-64 251.1 308 46.1
ClCG03G014510 Citrullus lanatus HOM05D000764 ORTHO05D004953 5.6e-64 248.8 298 49.0
DCAR_029576 Daucus carota HOM05D000764 ORTHO05D004953 3.6e-63 246.1 297 48.5
TPR.G19327 Trifolium pratense HOM05D000764 ORTHO05D004953 8.1e-63 245.0 311 44.1
Lsat_1_v5_gn_6_53100 Lactuca sativa HOM05D000764 ORTHO05D004953 1.1e-62 244.6 296 47.6
Nn7g35865 Nelumbo nucifera HOM05D000764 ORTHO05D004953 4.4e-61 239.2 299 47.5
Sed0024847 Sechium edule HOM05D000764 ORTHO05D004953 5.8e-61 238.8 298 46.6
MELO3C015581.2 Cucumis melo HOM05D000764 ORTHO05D004953 4.9e-60 235.7 297 45.8
CsaV3_1G041680 Cucumis sativus L. HOM05D000764 ORTHO05D004953 1.1e-59 234.6 297 45.8
Medtr3g083500 Medicago truncatula HOM05D000764 ORTHO05D004953 2.4e-59 233.4 311 43.4
AUR62019165 Chenopodium quinoa HOM05D000764 ORTHO05D004953 1.7e-57 227.3 298 44.3
AUR62040904 Chenopodium quinoa HOM05D000764 ORTHO05D004953 2.3e-57 226.9 304 44.4
EL10Ac4g10385 Beta vulgaris HOM05D000764 ORTHO05D004953 5.1e-57 225.7 296 44.6
Thhalv10011178m.g Eutrema salsugineum HOM05D000764 ORTHO05D004953 5.1e-57 225.7 302 47.0
Carub.0001s4383 Capsella rubella HOM05D000764 ORTHO05D004953 8.7e-57 224.9 310 46.1
THA.LOC104822680 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 1.9e-56 223.8 292 46.9
CARHR044980 Cardamine hirsuta HOM05D000764 ORTHO05D004953 1.3e-55 221.1 301 45.5
Sp1g41000 Schrenkiella parvula HOM05D000764 ORTHO05D004953 3.6e-55 219.5 302 45.4
THA.LOC104810327 Tarenaya hassleriana HOM05D000764 ORTHO05D004953 4.8e-55 219.2 297 45.5
BolC6t36790H Brassica oleracea HOM05D000764 ORTHO05D004953 6.9e-54 215.3 301 45.8
Glyma.11G256800 Glycine max HOM05D000764 ORTHO05D004953 1.5e-53 214.2 301 43.9
AT1G55325 Arabidopsis thaliana HOM05D000764 ORTHO05D004953 4.4e-53 212.6 300 44.3
A05p17530 Brassica napus HOM05D000764 ORTHO05D004953 4.4e-53 212.6 300 45.3
C06p15980 Brassica napus HOM05D000764 ORTHO05D004953 3.8e-52 209.5 304 44.4
AL1G63370 Arabidopsis lyrata HOM05D000764 ORTHO05D004953 4.9e-52 209.1 301 43.5
BraA05t20647Z Brassica rapa HOM05D000764 ORTHO05D004953 8.4e-52 208.4 302 44.7
Aa31LG10G1120 Aethionema arabicum HOM05D000764 ORTHO05D004953 1.4e-51 207.6 258 47.7
Aqoxy3G01104 Aquilegia oxysepala HOM05D000764 ORTHO05D004953 2.3e-49 200.3 291 42.3
BolC6t36102H Brassica oleracea HOM05D000764 ORTHO05D004953 2.3e-49 200.3 305 44.3
A06p00260 Brassica napus HOM05D000764 ORTHO05D004953 3.9e-49 199.5 304 43.4
BraA06t23242Z Brassica rapa HOM05D000764 ORTHO05D004953 3.9e-49 199.5 304 43.4
Psat5g101160 Pisum sativum HOM05D000764 ORTHO05D004953 3.9e-49 199.5 342 38.3
C06p10270 Brassica napus HOM05D000764 ORTHO05D004953 6.6e-49 198.7 305 43.9
PSO339G2492 Papaver somniferum HOM05D000764 ORTHO05D004953 8.1e-47 191.8 302 40.7
SalBow6G5302 Salvia bowleyana HOM05D000764 ORTHO05D004953 2.6e-45 186.8 195 51.8
Migut.L00380 Erythranthe guttata HOM05D000764 ORTHO05D004953 1.9e-43 180.6 190 51.1
BcaC08g44192 Brassica carinata HOM05D000764 ORTHO05D004953 6.0e-42 175.6 301 40.5
SHI31298 Sapria himalayana HOM05D000764 ORTHO05D004953 7.9e-42 175.3 291 41.2
VMungo1080G1230 Vigna mungo HOM05D000764 ORTHO05D004953 7.4e-40 168.7 182 47.3
CDE10G0477 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 1.8e-38 164.1 308 38.0
ATR0490G003 Amborella trichopoda HOM05D000764 ORTHO05D004953 2.4e-38 163.7 314 35.7
SEGI_04814 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 2.0e-37 160.6 322 36.6
SEGI_09587 Sequoiadendron giganteum HOM05D000764 ORTHO05D004953 2.0e-37 160.6 322 36.6
Zm00001eb379470 Zea mays HOM05D000764 ORTHO05D004953 2.2e-28 130.6 298 35.6
Hma1.2p1_0449F.1_g155090 Hydrangea macrophylla HOM05D000764 ORTHO05D004953 3.5e-26 123.2 105 61.0
Psat6g137480 Pisum sativum HOM05D000493 ORTHO05D004953 6.7e-25 119.0 168 38.7
SalBow6G2556 Salvia bowleyana HOM05D000764 ORTHO05D004953 3.3e-24 116.7 87 63.2
Oeu017835.1 Olea europaea HOM05D000764 ORTHO05D004953 2.0e-21 107.5 140 45.7
VMungo1080G0389 Vigna mungo HOM05D000764 ORTHO05D004953 2.2e-20 104.0 91 62.6
CDE10G0573 Ceratophyllum demersum HOM05D000764 ORTHO05D004953 2.7e-18 97.1 165 37.6
Mapoly0029s0052 Marchantia polymorpha HOM05D000764 ORTHO05D004953 2.7e-18 97.1 240 32.5
AagrBONN_evm.TU.Sc2ySwM_117.2245 Anthoceros agrestis HOM05D000764 ORTHO05D004953 3.6e-18 96.7 277 32.1
vmacro06915 Vaccinium macrocarpon HOM05D000764 ORTHO05D004953 3.7e-15 86.7 90 51.1
Pp3c7_4610 Physcomitrium patens HOM05D000764 ORTHO05D004953 2.4e-14 84.0 263 28.5
Pp3c11_22280 Physcomitrium patens HOM05D000764 ORTHO05D004953 3.1e-14 83.6 276 28.3
SMO365G0018 Selaginella moellendorffii HOM05D000764 ORTHO05D004953 9.1e-14 82.0 268 29.5
C07p61900 Brassica napus HOM05D000764 ORTHO05D004953 7.0e-06 55.8 52 61.5


User provided reference genes

Program Settings