Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G610.24 Capsicum annuum HOM05D005909 ORTHO05D007481 1.2e-219 766.1 385 100.0
Solyc05g008870.3 Solanum lycopersicum HOM05D005909 ORTHO05D007481 6.4e-208 727.2 385 94.3
Sopen05g004630 Solanum pennellii HOM05D005909 ORTHO05D007481 6.4e-208 727.2 385 94.3
Nitab4.5_0002112g0090 Nicotiana tabacum HOM05D005909 ORTHO05D007481 9.2e-207 723.4 385 93.0
Nitab4.5_0000694g0120 Nicotiana tabacum HOM05D005909 ORTHO05D007481 8.9e-202 706.8 385 91.9
Peaxi162Scf00179g00534 Petunia axillaris HOM05D005909 ORTHO05D007481 1.3e-176 623.2 383 83.3
TAR622G1259 Trochodendron aralioides HOM05D005909 ORTHO05D007481 1.9e-175 619.4 383 77.5
CSS0033004 Camellia sinensis var. sinensis HOM05D005909 ORTHO05D007481 3.2e-175 618.6 385 79.2
Cc11_g09670 Coffea canephora HOM05D005909 ORTHO05D007481 2.7e-174 615.5 383 77.0
Hma1.2p1_2306F.1_g319360 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 3.3e-172 608.6 385 77.9
Nn4g23953 Nelumbo nucifera HOM05D005909 ORTHO05D007481 7.4e-172 607.4 385 76.6
Actinidia14921 Actinidia chinensis HOM05D005909 ORTHO05D007481 4.8e-171 604.7 385 76.9
Hma1.2p1_1314F.1_g274990 Hydrangea macrophylla HOM05D005909 ORTHO05D007481 4.8e-171 604.7 385 77.1
vmacro10599 Vaccinium macrocarpon HOM05D005909 ORTHO05D007481 1.1e-170 603.6 385 77.1
Atru.chr11.237 Acer truncatum HOM05D005909 ORTHO05D007481 2.4e-170 602.4 385 76.6
Sabra10G0090400 Salix brachista HOM05D005909 ORTHO05D007481 3.1e-170 602.1 385 77.7
Potri.010G120200 Populus trichocarpa HOM05D005909 ORTHO05D007481 1.5e-169 599.7 384 77.3
QL01p010815 Quercus lobata HOM05D005909 ORTHO05D007481 3.4e-169 598.6 385 76.1
QL93p0145_0024 Quercus lobata HOM05D005909 ORTHO05D007481 3.4e-169 598.6 385 76.1
RcHm_v2.0_Chr4g0434411 Rosa chinensis HOM05D005909 ORTHO05D007481 5.8e-169 597.8 379 78.1
GSVIVG01011843001 Vitis vinifera HOM05D005909 ORTHO05D007481 5.8e-169 597.8 380 78.9
COL.COLO4_32148 Corchorus olitorius HOM05D005909 ORTHO05D007481 1.0e-168 597.0 383 75.5
Prupe.1G316800 Prunus persica HOM05D005909 ORTHO05D007481 1.0e-168 597.0 376 77.7
SalBow8G3248 Salvia bowleyana HOM05D005909 ORTHO05D007481 1.0e-168 597.0 383 75.5
Gohir.D02G171900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 4.9e-168 594.7 385 76.4
Lj5g0016761 Lotus japonicus HOM05D005909 ORTHO05D007481 8.4e-168 594.0 383 73.9
TWI79G1572 Tripterygium wilfordii HOM05D005909 ORTHO05D007481 1.4e-167 593.2 383 75.7
Gorai.005G193400 Gossypium raimondii HOM05D005909 ORTHO05D007481 1.2e-166 590.1 391 75.2
Rhsim09G0103900 Rhododendron simsii HOM05D005909 ORTHO05D007481 1.2e-166 590.1 401 74.1
HanXRQChr15g0477421 Helianthus annuus HOM05D005909 ORTHO05D007481 2.7e-166 589.0 386 74.6
Gohir.A03G148900 Gossypium hirsutum HOM05D005909 ORTHO05D007481 3.5e-166 588.6 392 75.5
CiPaw.05G242600 Carya illinoinensis HOM05D005909 ORTHO05D007481 4.6e-166 588.2 382 75.4
Lsat_1_v5_gn_3_62021 Lactuca sativa HOM05D005909 ORTHO05D007481 4.6e-166 588.2 383 75.2
MSTRG.13555 Avicennia marina HOM05D005909 ORTHO05D007481 7.9e-166 587.4 383 75.2
Duzib248G1493 Durio zibethinus HOM05D005909 ORTHO05D007481 7.9e-166 587.4 391 73.9
SalBow8G0352 Salvia bowleyana HOM05D005909 ORTHO05D007481 7.9e-166 587.4 390 73.8
Eucgr.G02238 Eucalyptus grandis HOM05D005909 ORTHO05D007481 3.0e-165 585.5 382 74.6
TPR.G4906 Trifolium pratense HOM05D005909 ORTHO05D007481 5.1e-165 584.7 383 73.9
Ciclev10015519m.g Citrus clementina HOM05D005909 ORTHO05D007481 8.7e-165 583.9 385 74.0
FvH4_4g26720 Fragaria vesca HOM05D005909 ORTHO05D007481 3.3e-164 582.0 389 74.6
Ca_06889_v3 Cicer arietinum L. HOM05D005909 ORTHO05D007481 7.4e-164 580.9 383 73.6
Glyma.20G120600 Glycine max HOM05D005909 ORTHO05D007481 7.4e-164 580.9 383 73.1
MBI16_g44832_MAGBIO Magnolia biondii HOM05D005909 ORTHO05D007481 9.6e-164 580.5 385 73.0
Cfa015837 Carpinus fangiana HOM05D005909 ORTHO05D007481 1.3e-163 580.1 385 75.1
DCAR_007264 Daucus carota HOM05D005909 ORTHO05D007481 6.3e-163 577.8 380 74.7
PSO782G5715 Papaver somniferum HOM05D005909 ORTHO05D007481 1.4e-162 576.6 383 73.4
Psat6g224680 Pisum sativum HOM05D005909 ORTHO05D007481 1.4e-162 576.6 383 73.4
MD16G1037200 Malus domestica HOM05D005909 ORTHO05D007481 1.8e-162 576.2 378 75.1
Medtr1g109590 Medicago truncatula HOM05D005909 ORTHO05D007481 1.8e-162 576.2 382 73.0
Aqoxy3G04056 Aquilegia oxysepala HOM05D005909 ORTHO05D007481 3.1e-162 575.5 384 74.2
PGR119G2457 Punica granatum HOM05D005909 ORTHO05D007481 9.0e-162 573.9 385 73.8
Lalb_Chr21g0308731 Lupinus albus HOM05D005909 ORTHO05D007481 1.2e-161 573.5 378 73.0
arahy.Tifrunner.gnm1.ann1.IU6D7D Arachis hypogaea HOM05D005909 ORTHO05D007481 2.0e-161 572.8 388 71.6
arahy.Tifrunner.gnm1.ann1.W577BF Arachis hypogaea HOM05D005909 ORTHO05D007481 2.0e-161 572.8 385 71.9
ECA246G0525 Erigeron canadensis HOM05D005909 ORTHO05D007481 1.3e-160 570.1 382 72.8
BcaC06g34207 Brassica carinata HOM05D005909 ORTHO05D007481 1.7e-160 569.7 379 73.9
MELO3C005340.2 Cucumis melo HOM05D005909 ORTHO05D007481 1.7e-160 569.7 385 72.7
C07p31670 Brassica napus HOM05D005909 ORTHO05D007481 3.2e-159 565.5 380 73.7
BolC7t43706H Brassica oleracea HOM05D005909 ORTHO05D007481 3.2e-159 565.5 380 73.7
CsaV3_5G028790 Cucumis sativus L. HOM05D005909 ORTHO05D007481 3.2e-159 565.5 385 71.7
Lj6A753G52 Lonicera japonica HOM05D005909 ORTHO05D007481 9.3e-159 563.9 385 74.3
Sc14g0007280 Simmondsia chinensis HOM05D005909 ORTHO05D007481 1.6e-158 563.1 386 72.8
CARHR143760 Cardamine hirsuta HOM05D005909 ORTHO05D007481 3.6e-158 562.0 384 71.6
AUR62037268 Chenopodium quinoa HOM05D005909 ORTHO05D007481 4.6e-158 561.6 376 71.8
Sed0017467 Sechium edule HOM05D005909 ORTHO05D007481 6.1e-158 561.2 385 71.4
Hund20744 Selenicereus undatus HOM05D005909 ORTHO05D007481 1.1e-156 557.0 382 70.7
VMungo0720G1068 Vigna mungo HOM05D005909 ORTHO05D007481 1.1e-156 557.0 383 71.0
AUR62002812 Chenopodium quinoa HOM05D005909 ORTHO05D007481 1.9e-156 556.2 376 71.3
THA.LOC104823950 Tarenaya hassleriana HOM05D005909 ORTHO05D007481 3.3e-156 555.4 385 71.4
A06p44550 Brassica napus HOM05D005909 ORTHO05D007481 5.7e-156 554.7 385 71.7
Sp2g12680 Schrenkiella parvula HOM05D005909 ORTHO05D007481 5.7e-156 554.7 383 71.0
BraA06t27329Z Brassica rapa HOM05D005909 ORTHO05D007481 4.8e-155 551.6 390 70.8
AL5G10170 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 2.4e-154 549.3 384 70.3
Aa31LG2G8670 Aethionema arabicum HOM05D005909 ORTHO05D007481 3.1e-154 548.9 383 70.8
Phvul.007G032000 Phaseolus vulgaris HOM05D005909 ORTHO05D007481 4.1e-154 548.5 383 70.2
AT2G01220 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 9.1e-154 547.4 384 71.4
EL10Ac6g14305 Beta vulgaris HOM05D005909 ORTHO05D007481 1.2e-153 547.0 383 68.4
Migut.E00369 Erythranthe guttata HOM05D005909 ORTHO05D007481 2.2e-152 542.7 425 66.8
Haze_00654 Corylus avellana HOM05D005909 ORTHO05D007481 2.9e-152 542.3 517 57.4
Dinv16136 Davidia involucrata HOM05D005909 ORTHO05D007481 1.1e-151 540.4 383 72.3
Cpa.g.sc65.66 Carica papaya HOM05D005909 ORTHO05D007481 7.2e-151 537.7 383 71.8
unitig_699.g19483 Utricularia gibba HOM05D005909 ORTHO05D007481 3.6e-150 535.4 381 69.0
CDE08G1136 Ceratophyllum demersum HOM05D005909 ORTHO05D007481 2.3e-149 532.7 383 67.6
ATR0807G244 Amborella trichopoda HOM05D005909 ORTHO05D007481 3.0e-149 532.3 383 67.6
HPP92_024514 Vanilla planifolia HOM05D005909 ORTHO05D007481 4.4e-148 528.5 375 69.6
PSO063G1187 Papaver somniferum HOM05D005909 ORTHO05D007481 2.2e-147 526.2 347 74.1
Thhalv10000909m.g Eutrema salsugineum HOM05D005909 ORTHO05D007481 2.4e-146 522.7 384 68.2
Ah.03g138370 Amaranthus hybridus HOM05D005909 ORTHO05D007481 3.1e-146 522.3 356 71.9
AL5G17030 Arabidopsis lyrata HOM05D005909 ORTHO05D007481 2.0e-145 519.6 385 67.3
Zm00001eb360650 Zea mays HOM05D005909 ORTHO05D007481 7.7e-145 517.7 382 67.5
CARHR148990 Cardamine hirsuta HOM05D005909 ORTHO05D007481 1.7e-144 516.5 384 65.9
Manes.06G064900 Manihot esculenta HOM05D005909 ORTHO05D007481 2.0e-140 503.1 309 79.9
AT3G27610 Arabidopsis thaliana HOM05D005909 ORTHO05D007481 2.6e-140 502.7 385 65.5
Carub.0005s0605 Capsella rubella HOM05D005909 ORTHO05D007481 1.3e-139 500.4 380 66.3
ClCG01G005900 Citrullus lanatus HOM05D005909 ORTHO05D007481 1.3e-139 500.4 385 66.2
FAN07G1481 Fragaria x ananassa HOM05D005909 ORTHO05D007481 1.4e-138 496.9 351 71.8
Thecc.02G222000 Theobroma cacao HOM05D005909 ORTHO05D007481 3.5e-137 492.3 308 79.2
FAN12G0127 Fragaria x ananassa HOM05D005909 ORTHO05D007481 1.5e-127 460.3 290 77.2
Dinv31596 Davidia involucrata HOM05D005909 ORTHO05D007481 6.1e-126 454.9 331 71.0
Oeu027686.1 Olea europaea HOM05D005909 ORTHO05D007481 1.8e-125 453.4 381 63.0
FAN22G0620 Fragaria x ananassa HOM05D005909 ORTHO05D007481 2.6e-124 449.5 290 75.5
FAN12G0185 Fragaria x ananassa HOM05D005909 ORTHO05D007481 2.7e-121 439.5 306 71.2
Actinidia16683 Actinidia chinensis HOM05D005909 ORTHO05D007481 7.2e-119 431.4 310 70.3
CANSAT01G0643 Cannabis sativa HOM05D005909 ORTHO05D007481 8.0e-118 427.9 262 77.9
AagrBONN_evm.TU.Sc2ySwM_362.1435 Anthoceros agrestis HOM05D004406 ORTHO05D005660 1.3e-115 420.6 374 56.4
Mapoly0100s0051 Marchantia polymorpha HOM05D005909 ORTHO05D007481 5.4e-114 415.2 381 55.4
Pp3c3_16750 Physcomitrium patens HOM05D005909 ORTHO05D007481 1.7e-112 410.2 381 55.1
Pp3c12_7340 Physcomitrium patens HOM05D005909 ORTHO05D007481 9.5e-111 404.4 379 55.7
TAR622G0977 Trochodendron aralioides HOM05D005909 ORTHO05D007481 3.2e-106 389.4 231 77.9
SMO196G0003 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 7.0e-106 388.3 398 50.5
FAN17G2694 Fragaria x ananassa HOM05D005909 ORTHO05D007481 8.6e-104 381.3 229 80.3
Carub.0005s0021 Capsella rubella HOM05D005909 ORTHO05D007481 1.5e-103 380.6 267 69.7
SGA_v2.0_scaffold14G06904 Striga asiatica HOM05D005909 ORTHO05D007481 1.1e-95 354.4 229 77.7
Os01g0691500 Oryza sativa ssp. japonica HOM05D005909 ORTHO05D007481 5.8e-92 342.0 270 64.8
PGSC0003DMG401030529 Solanum tuberosum HOM05D005909 ORTHO05D007481 2.7e-73 280.0 154 94.2
Carub.0005s0593 Capsella rubella HOM05D005909 ORTHO05D007481 1.8e-69 267.3 237 60.3
SGA_v2.0_scaffold14G06901 Striga asiatica HOM05D005909 ORTHO05D007481 4.6e-65 252.7 155 76.8
Cre06.g278116 Chlamydomonas reinhardtii HOM05D005909 ORTHO05D007481 1.5e-60 237.7 426 37.1
MCO06G004 Micromonas commoda HOM05D005909 ORTHO05D007481 1.5e-60 237.7 389 36.2
PRCOL_00006609 Prasinoderma coloniale HOM05D005909 ORTHO05D007481 1.9e-58 230.7 424 37.3
SEGI_08541 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 2.9e-51 206.8 151 68.2
Oeu027687.1 Olea europaea HOM05D005909 ORTHO05D007481 3.1e-45 186.8 115 81.7
SEGI_29486 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 3.6e-41 173.3 106 74.5
CBR_g39317 Chara braunii HOM05D005909 ORTHO05D007481 2.8e-30 137.1 182 42.3
CiPaw.05G241800 Carya illinoinensis HOM05D005909 ORTHO05D007481 2.3e-24 117.5 65 81.5
arahy.Tifrunner.gnm1.ann1.XNS652 Arachis hypogaea HOM05D005909 ORTHO05D007481 7.4e-23 112.5 145 47.6
SMO265G0018 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 2.4e-21 107.5 191 36.6
SMO163G0092 Selaginella moellendorffii HOM05D005909 ORTHO05D007481 1.0e-19 102.1 148 40.5
BcaC06g31323 Brassica carinata HOM05D005909 ORTHO05D007481 2.1e-17 94.4 68 72.1
TPR.G28941 Trifolium pratense HOM05D000324 ORTHO05D004875 8.0e-17 92.4 103 49.5
CBR_g39316 Chara braunii HOM05D000019 ORTHO05D000002 5.9e-12 76.3 70 52.9
SEGI_32432 Sequoiadendron giganteum HOM05D005909 ORTHO05D007481 5.9e-12 76.3 69 52.2
SMO146G0235 Selaginella moellendorffii HOM05D020292 ORTHO05D030583 2.2e-11 74.3 110 38.2
Gohir.D12G121400 Gossypium hirsutum HOM05D005909 ORTHO05D046826 4.2e-10 70.1 36 86.1
Gorai.008G132300 Gossypium raimondii HOM05D005909 ORTHO05D046826 5.2e-08 63.2 36 77.8
SMO199G0001 Selaginella moellendorffii HOM05D006925 ORTHO05D008830 2.0e-07 61.2 87 39.1


User provided reference genes

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