Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G61.2 Capsicum annuum HOM05D008117 ORTHO05D010265 1.3e-42 176.0 93 100.0
Sopen11g008360 Solanum pennellii HOM05D008117 ORTHO05D010265 1.5e-30 136.0 93 79.6
PGSC0003DMG400006546 Solanum tuberosum HOM05D008117 ORTHO05D010265 4.4e-30 134.4 90 81.1
ClCG08G010860 Citrullus lanatus HOM05D008117 ORTHO05D010265 1.1e-20 103.2 94 61.7
EL10Ac5g11972 Beta vulgaris HOM05D008117 ORTHO05D010265 3.2e-20 101.7 87 65.5
vmacro12526 Vaccinium macrocarpon HOM05D008117 ORTHO05D010265 3.2e-20 101.7 92 58.7
CSS0024149 Camellia sinensis var. sinensis HOM05D008117 ORTHO05D010265 9.2e-20 100.1 78 66.7
Ciclev10002965m.g Citrus clementina HOM05D008117 ORTHO05D010265 9.2e-20 100.1 93 57.0
Rhsim13G0192300 Rhododendron simsii HOM05D008117 ORTHO05D010265 1.2e-19 99.8 93 60.2
FAN08G2903 Fragaria x ananassa HOM05D008117 ORTHO05D010265 1.0e-18 96.7 82 59.8
FAN13G1450 Fragaria x ananassa HOM05D008117 ORTHO05D010265 1.0e-18 96.7 82 59.8
Sc23g0000960 Simmondsia chinensis HOM05D008117 ORTHO05D010265 1.7e-18 95.9 88 63.6
CsaV3_6G035660 Cucumis sativus L. HOM05D008117 ORTHO05D010265 2.3e-18 95.5 92 59.8
RcHm_v2.0_Chr7g0240501 Rosa chinensis HOM05D008117 ORTHO05D010265 2.3e-18 95.5 81 56.8
Sed0012248 Sechium edule HOM05D008117 ORTHO05D010265 6.6e-18 94.0 93 57.0
Hund16816 Selenicereus undatus HOM05D008117 ORTHO05D010265 6.6e-18 94.0 85 63.5
Thecc.08G115700 Theobroma cacao HOM05D008117 ORTHO05D010265 1.5e-17 92.8 90 58.9
PGR042G1408 Punica granatum HOM05D008117 ORTHO05D010265 1.9e-17 92.4 92 56.5
CiPaw.05G230200 Carya illinoinensis HOM05D008117 ORTHO05D010265 2.5e-17 92.0 90 57.8
FvH4_5g38460 Fragaria vesca HOM05D008117 ORTHO05D010265 2.5e-17 92.0 79 59.5
MSTRG.24141 Avicennia marina HOM05D008117 ORTHO05D010265 5.6e-17 90.9 76 61.8
Glyma.13G084800 Glycine max HOM05D008117 ORTHO05D010265 5.6e-17 90.9 82 57.3
Nn5g27934 Nelumbo nucifera HOM05D008117 ORTHO05D010265 5.6e-17 90.9 93 54.8
Oeu002001.1 Olea europaea HOM05D008117 ORTHO05D010265 1.2e-16 89.7 87 54.0
Gohir.A05G231100 Gossypium hirsutum HOM05D008117 ORTHO05D010265 1.6e-16 89.4 90 57.8
CANSAT35G0099 Cannabis sativa HOM05D008117 ORTHO05D010265 2.8e-16 88.6 91 54.9
Glyma.14G166600 Glycine max HOM05D008117 ORTHO05D010265 3.6e-16 88.2 82 56.1
DCAR_028229 Daucus carota HOM05D008117 ORTHO05D010265 4.7e-16 87.8 75 60.0
Psat5g111920 Pisum sativum HOM05D008117 ORTHO05D010265 4.7e-16 87.8 82 54.9
SGA_v2.0_scaffold25G11087 Striga asiatica HOM05D008117 ORTHO05D010265 4.7e-16 87.8 76 57.9
HPP92_011399 Vanilla planifolia HOM05D008117 ORTHO05D010265 4.7e-16 87.8 73 64.4
Eucgr.F03736 Eucalyptus grandis HOM05D008117 ORTHO05D010265 6.2e-16 87.4 91 56.0
Phvul.008G168800 Phaseolus vulgaris HOM05D008117 ORTHO05D010265 6.2e-16 87.4 80 57.5
FAN04G0767 Fragaria x ananassa HOM05D008117 ORTHO05D010265 8.1e-16 87.0 89 53.9
Duzib041G0298 Durio zibethinus HOM05D008117 ORTHO05D010265 1.1e-15 86.7 90 54.4
QL12p035434 Quercus lobata HOM05D008117 ORTHO05D010265 1.1e-15 86.7 79 58.2
Medtr5g062750 Medicago truncatula HOM05D008117 ORTHO05D010265 2.4e-15 85.5 78 59.0
Manes.18G072200 Manihot esculenta HOM05D008117 ORTHO05D010265 3.1e-15 85.1 90 55.6
Lj1g0006954 Lotus japonicus HOM05D008117 ORTHO05D010265 4.0e-15 84.7 82 54.9
MD15G1359700 Malus domestica HOM05D008117 ORTHO05D010265 8.9e-15 83.6 81 53.1
EL10Ac1g00048 Beta vulgaris HOM05D008117 ORTHO05D010265 1.5e-14 82.8 89 52.8
Prupe.1G507400 Prunus persica HOM05D008117 ORTHO05D010265 1.5e-14 82.8 93 52.7
arahy.Tifrunner.gnm1.ann1.J5UY3S Arachis hypogaea HOM05D008117 ORTHO05D010265 2.0e-14 82.4 91 50.5
arahy.Tifrunner.gnm1.ann1.V815ZK Arachis hypogaea HOM05D008117 ORTHO05D010265 2.6e-14 82.0 91 50.5
Carub.0001s3375 Capsella rubella HOM05D008117 ORTHO05D010265 2.6e-14 82.0 69 60.9
Thhalv10009847m.g Eutrema salsugineum HOM05D008117 ORTHO05D010265 2.6e-14 82.0 71 59.2
C01p32870 Brassica napus HOM05D008117 ORTHO05D010265 4.4e-14 81.3 77 58.4
Lalb_Chr04g0253261 Lupinus albus HOM05D008117 ORTHO05D010265 4.4e-14 81.3 90 54.4
Os02g0552400 Oryza sativa ssp. japonica HOM05D008117 ORTHO05D010265 4.4e-14 81.3 77 55.8
BolC1t03228H Brassica oleracea HOM05D008117 ORTHO05D010265 9.9e-14 80.1 77 57.1
AUR62002978 Chenopodium quinoa HOM05D008117 ORTHO05D010265 1.3e-13 79.7 77 57.1
MELO3C030294.2 Cucumis melo HOM05D008117 ORTHO05D010265 1.7e-13 79.3 75 60.0
Gohir.D05G233600 Gossypium hirsutum HOM05D008117 ORTHO05D010265 2.9e-13 78.6 90 53.3
Gorai.009G241700 Gossypium raimondii HOM05D008117 ORTHO05D010265 2.9e-13 78.6 90 53.3
AT1G36380 Arabidopsis thaliana HOM05D008117 ORTHO05D010265 3.8e-13 78.2 87 54.0
Lsat_1_v5_gn_1_112940 Lactuca sativa HOM05D006309 ORTHO05D007937 3.8e-13 78.2 75 53.3
A01p25940 Brassica napus HOM05D008117 ORTHO05D010265 6.4e-13 77.4 77 55.8
CARHR035030 Cardamine hirsuta HOM05D008117 ORTHO05D010265 6.4e-13 77.4 76 53.9
Sabra02G0071000 Salix brachista HOM05D008117 ORTHO05D010265 8.4e-13 77.0 78 52.6
Zm00001eb227210 Zea mays HOM05D008117 ORTHO05D010265 1.9e-12 75.9 77 55.8
A05p19980 Brassica napus HOM05D008117 ORTHO05D010265 2.4e-12 75.5 75 54.7
BraA05t20905Z Brassica rapa HOM05D008117 ORTHO05D010265 2.4e-12 75.5 75 54.7
Aa31LG6G9030 Aethionema arabicum HOM05D008117 ORTHO05D010265 7.1e-12 73.9 67 59.7
Zm00001eb243570 Zea mays HOM05D008117 ORTHO05D010265 9.3e-12 73.6 67 62.7
SalBow6G0993 Salvia bowleyana HOM05D008117 ORTHO05D010265 1.6e-11 72.8 50 68.0
Potri.002G090100 Populus trichocarpa HOM05D008117 ORTHO05D010265 4.6e-11 71.2 84 51.2
VMungo0647G2241 Vigna mungo HOM05D008117 ORTHO05D010265 1.9e-09 65.9 50 60.0
Potri.005G171000 Populus trichocarpa HOM05D008117 ORTHO05D010265 2.5e-09 65.5 88 48.9
CDE08G1486 Ceratophyllum demersum HOM05D008117 ORTHO05D010265 5.6e-09 64.3 63 61.9
CDE06G1754 Ceratophyllum demersum HOM05D000001 ORTHO05D011242 7.6e-06 53.9 54 61.1


User provided reference genes

Program Settings