Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G608.11 Capsicum annuum HOM05D003265 ORTHO05D003819 0.0e+00 1804.3 1274 100.0
PGSC0003DMG400001737 Solanum tuberosum HOM05D003265 ORTHO05D003819 2.6e-234 816.6 1192 66.8
Solyc09g007340.4 Solanum lycopersicum HOM05D000855 ORTHO05D002321 9.4e-224 781.6 1195 64.9
Sopen09g002240 Solanum pennellii HOM05D003265 ORTHO05D003819 1.2e-215 754.6 1208 62.5
Nitab4.5_0003895g0030 Nicotiana tabacum HOM05D000855 ORTHO05D002321 3.5e-186 656.8 1161 54.8
Nitab4.5_0001142g0090 Nicotiana tabacum HOM05D000855 ORTHO05D002321 1.5e-165 588.2 1156 51.0
Peaxi162Scf00005g04612 Petunia axillaris HOM05D003265 ORTHO05D003819 3.1e-94 351.3 1161 48.0
Oeu035141.2 Olea europaea HOM05D003265 ORTHO05D003819 3.1e-41 175.3 399 40.6
Migut.L01659 Erythranthe guttata HOM05D003265 ORTHO05D003819 5.3e-41 174.5 573 33.9
Dinv37252 Davidia involucrata HOM05D003265 ORTHO05D003819 8.4e-39 167.2 273 48.0
Oeu026844.1 Olea europaea HOM05D003265 ORTHO05D003819 7.1e-38 164.1 364 42.0
Dinv35709 Davidia involucrata HOM05D003265 ORTHO05D003819 2.1e-37 162.5 325 43.1
Cc06_g03550 Coffea canephora HOM05D003265 ORTHO05D003819 5.7e-35 154.5 354 41.8
SalBow4G0859 Salvia bowleyana HOM05D003265 ORTHO05D003819 3.5e-29 135.2 316 38.6
Actinidia05271 Actinidia chinensis HOM05D003265 ORTHO05D003819 6.7e-28 131.0 385 38.7
Cfa017508 Carpinus fangiana HOM05D003265 ORTHO05D003819 6.7e-28 131.0 382 37.7
TWI74G1096 Tripterygium wilfordii HOM05D003265 ORTHO05D003819 1.4e-25 123.2 406 34.7
CSS0020316 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 2.2e-23 115.9 372 37.1
MSTRG.26726 Avicennia marina HOM05D003265 ORTHO05D003819 5.0e-23 114.8 477 31.7
Haze_20650 Corylus avellana HOM05D003265 ORTHO05D003819 1.4e-22 113.2 382 35.6
Duzib128G1251 Durio zibethinus HOM05D003265 ORTHO05D003819 3.6e-21 108.6 478 32.0
RcHm_v2.0_Chr3g0468801 Rosa chinensis HOM05D003265 ORTHO05D003819 6.7e-20 104.4 417 33.8
QL07p045275 Quercus lobata HOM05D003265 ORTHO05D003819 8.8e-20 104.0 363 35.8
TAR623G0684 Trochodendron aralioides HOM05D003265 ORTHO05D003819 1.5e-19 103.2 502 30.7
CSS0008335 Camellia sinensis var. sinensis HOM05D003265 ORTHO05D003819 7.4e-19 100.9 302 37.4
FvH4_6g15330 Fragaria vesca HOM05D003265 ORTHO05D003819 2.2e-18 99.4 465 31.4
TAR633G0548 Trochodendron aralioides HOM05D003265 ORTHO05D003819 1.4e-17 96.7 415 33.7
FAN05G5023 Fragaria x ananassa HOM05D003265 ORTHO05D003819 2.4e-17 95.9 499 30.1
FAN05G5644 Fragaria x ananassa HOM05D003265 ORTHO05D003819 2.4e-17 95.9 499 30.1
Oeu026065.2 Olea europaea HOM05D003265 ORTHO05D003819 6.9e-17 94.4 344 33.7
RhsimUnG0118100 Rhododendron simsii HOM05D003265 ORTHO05D003819 1.2e-16 93.6 364 35.2
TWI77G0315 Tripterygium wilfordii HOM05D003265 ORTHO05D003819 1.2e-16 93.6 297 37.0
Atru.chr8.2556 Acer truncatum HOM05D003265 ORTHO05D003819 2.0e-16 92.8 403 29.0
CiPaw.10G137500 Carya illinoinensis HOM05D003265 ORTHO05D003819 2.0e-16 92.8 400 33.8
MD12G1124300 Malus domestica HOM05D003265 ORTHO05D003819 3.4e-16 92.0 422 32.9
Sc20g0004060 Simmondsia chinensis HOM05D003265 ORTHO05D003819 3.8e-15 88.6 353 33.1
Eucgr.A01175 Eucalyptus grandis HOM05D003265 ORTHO05D003819 1.1e-14 87.0 270 36.3
SGA_v2.0_scaffold35G14161 Striga asiatica HOM05D003265 ORTHO05D003819 1.1e-14 87.0 311 34.1
GSVIVG01025625001 Vitis vinifera HOM05D003265 ORTHO05D003819 7.2e-14 84.3 284 33.8
Gohir.A01G217200 Gossypium hirsutum HOM05D003265 ORTHO05D003819 1.2e-13 83.6 477 28.3
Hund20166 Selenicereus undatus HOM05D003265 ORTHO05D003819 1.6e-13 83.2 316 35.4
Rhsim04G0151400 Rhododendron simsii HOM05D003265 ORTHO05D003819 2.1e-13 82.8 437 30.9
MD04G1104400 Malus domestica HOM05D003265 ORTHO05D003819 2.7e-13 82.4 406 32.3
Ah.15g092100 Amaranthus hybridus HOM05D003265 ORTHO05D003819 3.6e-13 82.0 380 32.4
Psat3g044800 Pisum sativum HOM05D003265 ORTHO05D003819 4.7e-13 81.6 279 35.8
Prupe.6G241300 Prunus persica HOM05D003265 ORTHO05D003819 4.7e-13 81.6 405 32.1
Lalb_Chr20g0112961 Lupinus albus HOM05D003265 ORTHO05D003819 1.0e-12 80.5 274 32.8
HanXRQChr01g0027471 Helianthus annuus HOM05D003265 ORTHO05D003819 1.8e-12 79.7 357 34.2
PGR004G1993 Punica granatum HOM05D000855 ORTHO05D002321 1.8e-12 79.7 473 29.6
SGA_v2.0_scaffold94G28667 Striga asiatica HOM05D003265 ORTHO05D003819 2.3e-12 79.3 294 34.0
Glyma.03G177900 Glycine max HOM05D003265 ORTHO05D003819 5.1e-12 78.2 274 34.3
Lsat_1_v5_gn_1_53881 Lactuca sativa HOM05D003265 ORTHO05D003819 8.8e-12 77.4 278 33.8
Phvul.001G174800 Phaseolus vulgaris HOM05D003265 ORTHO05D003819 8.8e-12 77.4 340 30.9
Gohir.D01G205900 Gossypium hirsutum HOM05D003265 ORTHO05D003819 1.1e-11 77.0 391 29.9
DCAR_014962 Daucus carota HOM05D003265 ORTHO05D003819 2.0e-11 76.3 346 32.7
Nn2g12994 Nelumbo nucifera HOM05D003265 ORTHO05D003819 3.3e-11 75.5 320 33.4
Potri.016G085600 Populus trichocarpa HOM05D003265 ORTHO05D003819 3.3e-11 75.5 391 30.9
MSTRG.10296 Avicennia marina HOM05D003265 ORTHO05D003819 4.4e-11 75.1 358 31.6
Gorai.002G250300 Gossypium raimondii HOM05D003265 ORTHO05D003819 1.3e-10 73.6 438 28.8
EL10Ac7g17351 Beta vulgaris HOM05D003265 ORTHO05D003819 2.8e-10 72.4 339 31.3
unitig_746.g26761 Utricularia gibba HOM05D003265 ORTHO05D003819 4.8e-10 71.6 328 32.9
DCAR_017729 Daucus carota HOM05D003265 ORTHO05D003819 1.1e-09 70.5 468 31.6
GSVIVG01016342001 Vitis vinifera HOM05D003265 ORTHO05D003819 1.8e-09 69.7 349 28.9
AUR62040021 Chenopodium quinoa HOM05D003265 ORTHO05D003819 7.0e-09 67.8 461 27.3
AUR62042920 Chenopodium quinoa HOM05D003265 ORTHO05D003819 1.5e-08 66.6 257 31.9
Manes.08G003400 Manihot esculenta HOM05D003265 ORTHO05D003819 1.5e-08 66.6 331 28.7
Manes.09G080700 Manihot esculenta HOM05D003265 ORTHO05D003819 1.5e-08 66.6 301 30.6
Lj5g0012648 Lotus japonicus HOM05D003265 ORTHO05D003819 2.0e-08 66.2 365 29.0
FAN14G0893 Fragaria x ananassa HOM05D000009 ORTHO05D003819 2.6e-08 65.9 552 26.3
Psat6g070560 Pisum sativum HOM05D003265 ORTHO05D003819 1.7e-07 63.2 298 30.5
Dinv04678 Davidia involucrata HOM05D003265 ORTHO05D003819 2.2e-07 62.8 481 28.9
Aqoxy3G02606 Aquilegia oxysepala HOM05D003265 ORTHO05D003819 5.0e-07 61.6 293 30.0
Ca_08825_v3 Cicer arietinum L. HOM05D003265 ORTHO05D003819 6.5e-07 61.2 452 27.7
COL.COLO4_27082 Corchorus olitorius HOM05D003265 ORTHO05D003819 8.5e-07 60.8 419 27.7
PSO384G1633 Papaver somniferum HOM05D003265 ORTHO05D003819 1.1e-06 60.5 703 26.6
Sed0003387 Sechium edule HOM05D003265 ORTHO05D003819 1.5e-06 60.1 268 30.6
Medtr7g100700 Medicago truncatula HOM05D003265 ORTHO05D003819 1.9e-06 59.7 407 27.3
MELO3C009314.2 Cucumis melo HOM05D003265 ORTHO05D003819 3.2e-06 58.9 325 31.4


User provided reference genes

Program Settings