Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G606.58 Capsicum annuum HOM05D006273 ORTHO05D007607 5.2e-215 750.7 369 100.0
PGSC0003DMG400025745 Solanum tuberosum HOM05D006273 ORTHO05D007607 1.6e-147 526.6 314 85.4
Nitab4.5_0008075g0050 Nicotiana tabacum HOM05D006273 ORTHO05D007607 3.7e-144 515.4 314 83.8
Sopen01g049300 Solanum pennellii HOM05D006273 ORTHO05D007607 7.1e-140 501.1 314 82.2
Solyc01g107030.3 Solanum lycopersicum HOM05D006273 ORTHO05D007607 2.3e-138 496.1 314 81.2
Peaxi162Scf00016g02848 Petunia axillaris HOM05D006273 ORTHO05D007607 1.1e-121 440.7 313 73.2
Nitab4.5_0001105g0020 Nicotiana tabacum HOM05D006273 ORTHO05D007607 1.4e-79 300.8 169 88.2
Dinv42237 Davidia involucrata HOM05D006273 ORTHO05D007607 2.1e-75 287.0 311 52.4
Cc02_g19850 Coffea canephora HOM05D006273 ORTHO05D007607 3.7e-72 276.2 317 50.8
Actinidia04385 Actinidia chinensis HOM05D002857 ORTHO05D007919 1.5e-65 254.2 316 47.5
Hma1.2p1_1059F.1_g252960 Hydrangea macrophylla HOM05D006273 ORTHO05D007607 2.0e-65 253.8 317 47.6
MSTRG.5316 Avicennia marina HOM05D006273 ORTHO05D007607 2.6e-65 253.4 326 48.5
SalBow3G1994 Salvia bowleyana HOM05D006273 ORTHO05D007607 2.2e-64 250.4 315 46.7
Manes.10G081700 Manihot esculenta HOM05D006273 ORTHO05D007607 1.4e-58 231.1 325 46.2
Cpa.g.sc106.50 Carica papaya HOM05D006273 ORTHO05D007607 3.1e-58 229.9 317 44.8
Lj5A219G34 Lonicera japonica HOM05D006273 ORTHO05D007607 3.1e-58 229.9 331 44.4
Cfa004628 Carpinus fangiana HOM05D006273 ORTHO05D007607 1.1e-55 221.5 314 47.5
Prupe.8G144600 Prunus persica HOM05D006273 ORTHO05D007607 4.1e-55 219.5 317 43.8
MD05G1099900 Malus domestica HOM05D006273 ORTHO05D007607 2.1e-54 217.2 317 44.2
Oeu010445.1 Olea europaea HOM05D006273 ORTHO05D007607 4.6e-54 216.1 320 46.9
TAR381G1192 Trochodendron aralioides HOM05D006273 ORTHO05D007607 6.0e-54 215.7 316 44.0
CSS0011953 Camellia sinensis var. sinensis HOM05D002857 ORTHO05D007919 7.8e-54 215.3 320 44.1
Nn5g30577 Nelumbo nucifera HOM05D006273 ORTHO05D007607 6.6e-53 212.2 320 43.1
QL11p030642 Quercus lobata HOM05D006273 ORTHO05D007607 1.1e-52 211.5 314 45.5
GSVIVG01037839001 Vitis vinifera HOM05D006273 ORTHO05D007607 1.1e-52 211.5 337 43.3
Duzib132G0234 Durio zibethinus HOM05D006273 ORTHO05D007607 1.5e-52 211.1 316 44.9
Thecc.02G116800 Theobroma cacao HOM05D006273 ORTHO05D007607 2.5e-52 210.3 316 42.7
Haze_10223 Corylus avellana HOM05D006273 ORTHO05D007607 3.3e-52 209.9 325 46.2
Gohir.D12G020000 Gossypium hirsutum HOM05D006273 ORTHO05D007607 4.3e-52 209.5 320 43.4
Gorai.008G020400 Gossypium raimondii HOM05D006273 ORTHO05D007607 5.6e-52 209.1 320 43.4
Gohir.A12G019800 Gossypium hirsutum HOM05D006273 ORTHO05D007607 9.6e-52 208.4 320 43.1
CiPaw.05G017700 Carya illinoinensis HOM05D006273 ORTHO05D007607 1.4e-50 204.5 316 44.9
DCAR_001698 Daucus carota HOM05D006273 ORTHO05D007607 1.8e-50 204.1 321 41.4
Potri.009G088600 Populus trichocarpa HOM05D006273 ORTHO05D007607 2.2e-48 197.2 317 41.6
Ciclev10028827m.g Citrus clementina HOM05D006273 ORTHO05D007607 2.9e-48 196.8 320 41.6
COL.COLO4_32516 Corchorus olitorius HOM05D006273 ORTHO05D007607 2.9e-48 196.8 313 42.2
Duzib248G0443 Durio zibethinus HOM05D006273 ORTHO05D007607 2.9e-48 196.8 324 41.7
TWI23G0281 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 3.8e-48 196.4 316 40.5
FAN24G1968 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.4e-47 193.7 314 40.8
FAN24G2779 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.4e-47 193.7 314 40.8
PGR042G0373 Punica granatum HOM05D006273 ORTHO05D007607 5.4e-47 192.6 324 40.4
FAN27G2995 Fragaria x ananassa HOM05D006273 ORTHO05D007607 2.7e-46 190.3 317 40.4
RcHm_v2.0_Chr6g0253781 Rosa chinensis HOM05D006273 ORTHO05D007607 1.7e-45 187.6 319 40.8
SGA_v2.0_scaffold225G43040 Striga asiatica HOM05D006273 ORTHO05D007607 5.1e-45 186.0 314 41.4
Rhsim05G0090800 Rhododendron simsii HOM05D002857 ORTHO05D007919 1.1e-44 184.9 378 38.6
FAN15G3526 Fragaria x ananassa HOM05D006273 ORTHO05D007607 4.3e-44 183.0 317 38.8
FAN20G1056 Fragaria x ananassa HOM05D006273 ORTHO05D007607 4.3e-44 183.0 311 39.5
CANSAT25G0612 Cannabis sativa HOM05D006273 ORTHO05D007607 1.8e-42 177.6 323 39.0
FvH4_2g04340 Fragaria vesca HOM05D006273 ORTHO05D007607 4.0e-42 176.4 315 39.0
CsaV3_4G000230 Cucumis sativus L. HOM05D006273 ORTHO05D007607 1.5e-41 174.5 329 41.3
ClCG10G010280 Citrullus lanatus HOM05D006273 ORTHO05D007607 1.1e-39 168.3 324 40.1
Aqoxy6G02639 Aquilegia oxysepala HOM05D006273 ORTHO05D007607 3.2e-39 166.8 296 39.9
Hund24173 Selenicereus undatus HOM05D006273 ORTHO05D007607 3.2e-39 166.8 302 40.4
MELO3C018010.2 Cucumis melo HOM05D006273 ORTHO05D007607 9.3e-39 165.2 322 39.8
vmacro19532 Vaccinium macrocarpon HOM05D006273 ORTHO05D007607 4.6e-38 162.9 403 34.5
Sc18g0007420 Simmondsia chinensis HOM05D006273 ORTHO05D007607 6.0e-38 162.5 312 40.4
Sc18g0007460 Simmondsia chinensis HOM05D006273 ORTHO05D007607 6.0e-38 162.5 312 40.4
TAR628G0174 Trochodendron aralioides HOM05D006273 ORTHO05D007607 1.0e-37 161.8 317 37.2
unitig_21.g20718 Utricularia gibba HOM05D002857 ORTHO05D007919 2.3e-37 160.6 323 37.2
Sed0011178 Sechium edule HOM05D006273 ORTHO05D007607 3.0e-37 160.2 315 39.0
Sabra09G0068600 Salix brachista HOM05D006273 ORTHO05D007607 3.9e-37 159.8 373 34.9
Nn1g04569 Nelumbo nucifera HOM05D006273 ORTHO05D007607 3.1e-34 150.2 321 36.8
EL10Ac9g22769 Beta vulgaris HOM05D006273 ORTHO05D007607 1.5e-33 147.9 349 34.1
PSO541G6083 Papaver somniferum HOM05D006273 ORTHO05D007607 7.6e-33 145.6 320 38.4
HanXRQChr10g0292221 Helianthus annuus HOM05D006273 ORTHO05D007607 6.4e-32 142.5 316 38.9
PSO675G1322 Papaver somniferum HOM05D006273 ORTHO05D007607 1.9e-31 141.0 321 37.1
Migut.N01140 Erythranthe guttata HOM05D006273 ORTHO05D007607 3.2e-31 140.2 218 45.0
arahy.Tifrunner.gnm1.ann1.71AIDN Arachis hypogaea HOM05D006273 ORTHO05D007607 5.4e-31 139.4 313 35.8
arahy.Tifrunner.gnm1.ann1.P501AI Arachis hypogaea HOM05D006273 ORTHO05D007607 5.4e-31 139.4 251 39.8
Glyma.20G134100 Glycine max HOM05D006273 ORTHO05D007607 5.4e-31 139.4 310 37.1
CSS0045592 Camellia sinensis var. sinensis HOM05D006273 ORTHO05D007607 1.6e-30 137.9 250 38.0
VMungo0720G2467 Vigna mungo HOM05D006273 ORTHO05D007607 6.0e-30 136.0 313 34.5
Ah.01g002130 Amaranthus hybridus HOM05D006273 ORTHO05D007607 1.0e-29 135.2 308 33.1
THA.LOC104815220 Tarenaya hassleriana HOM05D006273 ORTHO05D007607 1.0e-29 135.2 322 33.2
Phvul.002G051700 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 5.1e-29 132.9 260 39.6
ECA234G1150 Erigeron canadensis HOM05D006273 ORTHO05D007607 8.7e-29 132.1 310 35.5
Lalb_Chr06g0165121 Lupinus albus HOM05D006273 ORTHO05D007607 1.5e-28 131.3 247 38.5
Phvul.007G045300 Phaseolus vulgaris HOM05D006273 ORTHO05D007607 1.9e-28 131.0 325 34.5
Lj5g0005423 Lotus japonicus HOM05D006273 ORTHO05D007607 2.5e-28 130.6 269 39.0
Glyma.10G257100 Glycine max HOM05D006273 ORTHO05D007607 3.3e-28 130.2 310 36.5
VMungo1215G3137 Vigna mungo HOM05D006273 ORTHO05D007607 9.6e-28 128.6 316 36.1
Medtr1g106210 Medicago truncatula HOM05D006273 ORTHO05D007607 1.3e-27 128.3 265 39.2
Glyma.01G242500 Glycine max HOM05D006273 ORTHO05D007607 1.1e-26 125.2 232 40.5
Hund24138 Selenicereus undatus HOM05D006273 ORTHO05D007607 6.9e-26 122.5 211 42.7
CDE02G4649 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 1.2e-25 121.7 224 40.6
Lsat_1_v5_gn_5_114180 Lactuca sativa HOM05D006273 ORTHO05D007607 3.4e-25 120.2 320 37.2
Psat6g214920 Pisum sativum HOM05D006273 ORTHO05D007607 3.4e-25 120.2 221 38.5
Potri.001G295000 Populus trichocarpa HOM05D006273 ORTHO05D007607 4.5e-25 119.8 148 52.0
TPR.G27136 Trifolium pratense HOM05D006273 ORTHO05D007607 3.8e-24 116.7 269 36.4
Ca_11032_v3 Cicer arietinum L. HOM05D006273 ORTHO05D007607 3.2e-23 113.6 188 43.1
Eucgr.G01219 Eucalyptus grandis HOM05D006273 ORTHO05D007607 4.2e-23 113.2 264 38.3
Nitab4.5_0003739g0020 Nicotiana tabacum HOM05D006273 ORTHO05D007607 4.2e-23 113.2 70 84.3
Aa31LG8G6430 Aethionema arabicum HOM05D006273 ORTHO05D007607 1.2e-22 111.7 322 33.5
Glyma.11G001800 Glycine max HOM05D006273 ORTHO05D007607 2.1e-22 110.9 253 37.2
AUR62017546 Chenopodium quinoa HOM05D006273 ORTHO05D007607 7.9e-22 109.0 310 32.6
Sp3g17690 Schrenkiella parvula HOM05D006273 ORTHO05D007607 1.0e-21 108.6 302 31.8
C05p45180 Brassica napus HOM05D006273 ORTHO05D007607 1.3e-21 108.2 312 33.3
AUR62025214 Chenopodium quinoa HOM05D000052 ORTHO05D007607 8.7e-21 105.5 197 36.5
BcaB06g26035 Brassica carinata HOM05D006273 ORTHO05D007607 1.1e-20 105.1 315 34.0
Lj1g0018578 Lotus japonicus HOM05D006273 ORTHO05D007607 1.1e-20 105.1 270 35.9
CARHR095110 Cardamine hirsuta HOM05D006273 ORTHO05D007607 1.9e-20 104.4 318 32.4
Thhalv10021227m.g Eutrema salsugineum HOM05D006273 ORTHO05D007607 3.3e-20 103.6 316 34.8
CDE04G2504 Ceratophyllum demersum HOM05D006273 ORTHO05D007607 5.7e-20 102.8 319 32.9
Os03g0203000 Oryza sativa ssp. japonica HOM05D006273 ORTHO05D007607 7.4e-20 102.4 297 33.3
ATR1153G071 Amborella trichopoda HOM05D006273 ORTHO05D007607 9.6e-20 102.1 325 33.2
Carub.0003s1952 Capsella rubella HOM05D006273 ORTHO05D007607 2.1e-19 100.9 313 30.4
BcaC05g28438 Brassica carinata HOM05D006273 ORTHO05D007607 3.7e-19 100.1 312 33.7
HPP92_007764 Vanilla planifolia HOM05D006273 ORTHO05D007607 3.7e-19 100.1 332 33.1
AUR62044228 Chenopodium quinoa HOM05D006273 ORTHO05D007607 8.2e-19 99.0 143 43.4
TWI59G0086 Tripterygium wilfordii HOM05D006273 ORTHO05D007607 5.3e-18 96.3 200 35.5
BolC5t33244H Brassica oleracea HOM05D000470 ORTHO05D000348 1.0e-16 92.0 312 32.1
Aqoxy6G02626 Aquilegia oxysepala HOM05D002857 ORTHO05D007919 1.3e-16 91.7 246 34.6
AT3G19650 Arabidopsis thaliana HOM05D006273 ORTHO05D007607 8.4e-16 89.0 305 31.1
Zm00001eb007690 Zea mays HOM05D006273 ORTHO05D007607 4.2e-15 86.7 322 29.2
Atru.chr5.2357 Acer truncatum HOM05D006273 ORTHO05D007607 2.1e-14 84.3 221 32.1
Oeu037282.1 Olea europaea HOM05D006273 ORTHO05D007607 3.9e-13 80.1 226 32.3
SEGI_25142 Sequoiadendron giganteum HOM05D006273 ORTHO05D007607 1.6e-11 74.7 241 34.0
AL3G33090 Arabidopsis lyrata HOM05D006273 ORTHO05D007607 2.8e-11 73.9 303 29.7
Dinv15805 Davidia involucrata HOM05D006273 ORTHO05D007607 1.5e-09 68.2 121 40.5
FvH4_2g03741 Fragaria vesca HOM05D006273 ORTHO05D007607 7.2e-07 59.3 107 36.4
TPR.G8308 Trifolium pratense HOM05D006273 ORTHO05D007607 4.6e-06 56.6 208 29.8


User provided reference genes

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