Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G604.1 Capsicum annuum HOM05D003671 ORTHO05D004285 0.0e+00 1714.5 887 100.0
Nitab4.5_0007794g0010 Nicotiana tabacum HOM05D003671 ORTHO05D004285 0.0e+00 1332.4 887 78.6
Peaxi162Scf00595g00423 Petunia axillaris HOM05D003671 ORTHO05D004285 0.0e+00 1269.2 873 78.1
Nitab4.5_0002204g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 0.0e+00 1250.3 849 78.4
PGSC0003DMG400013061 Solanum tuberosum HOM05D003671 ORTHO05D004285 2.5e-279 965.7 872 63.0
Nitab4.5_0002348g0020 Nicotiana tabacum HOM05D003671 ORTHO05D004285 2.7e-278 962.2 895 63.0
Sopen09g011320 Solanum pennellii HOM05D003671 ORTHO05D004285 2.2e-272 942.6 872 62.0
Solyc09g018310.4 Solanum lycopersicum HOM05D003671 ORTHO05D004285 6.1e-270 934.5 872 61.7
CSS0036424 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 1.4e-266 923.3 905 58.9
Dinv25318 Davidia involucrata HOM05D003671 ORTHO05D004285 1.8e-266 922.9 900 58.1
CSS0037141 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 5.9e-265 917.9 905 58.7
CAN.G15.24 Capsicum annuum HOM05D003671 ORTHO05D004285 3.8e-264 915.2 838 63.4
MSTRG.18954 Avicennia marina HOM05D003671 ORTHO05D004285 5.1e-261 904.8 891 59.3
Nitab4.5_0000126g0070 Nicotiana tabacum HOM05D003671 ORTHO05D004285 1.5e-260 903.3 859 62.5
Hma1.2p1_1052F.1_g252340 Hydrangea macrophylla HOM05D003671 ORTHO05D004285 6.3e-259 897.9 898 58.1
Cc06_g00530 Coffea canephora HOM05D003671 ORTHO05D004285 1.5e-257 893.3 877 59.6
Manes.09G115800 Manihot esculenta HOM05D003671 ORTHO05D004285 4.5e-257 891.7 901 57.6
Rhsim05G0229100 Rhododendron simsii HOM05D003671 ORTHO05D004285 5.9e-257 891.3 909 57.1
Actinidia29047 Actinidia chinensis HOM05D003671 ORTHO05D004285 5.5e-255 884.8 901 58.0
Actinidia11522 Actinidia chinensis HOM05D003671 ORTHO05D004285 6.7e-253 877.9 907 57.1
Manes.09G116100 Manihot esculenta HOM05D003671 ORTHO05D004285 4.1e-250 868.6 899 56.6
Prupe.6G290600 Prunus persica HOM05D003671 ORTHO05D004285 1.7e-248 863.2 904 56.4
Thecc.04G154700 Theobroma cacao HOM05D003671 ORTHO05D004285 2.7e-246 855.9 897 55.4
CSS0025205 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 4.0e-245 852.0 903 55.3
CSS0031435 Camellia sinensis var. sinensis HOM05D003671 ORTHO05D004285 8.8e-245 850.9 903 55.3
MSTRG.5514 Avicennia marina HOM05D003671 ORTHO05D004285 3.4e-244 849.0 891 55.2
SGA_v2.0_scaffold85G26648 Striga asiatica HOM05D003671 ORTHO05D004285 7.5e-244 847.8 897 55.2
Duzib212G0018 Durio zibethinus HOM05D003671 ORTHO05D004285 1.4e-242 843.6 897 55.3
Duzib151G0206 Durio zibethinus HOM05D003671 ORTHO05D004285 7.7e-241 837.8 897 54.1
Ciclev10011037m.g Citrus clementina HOM05D003671 ORTHO05D004285 1.3e-240 837.0 899 57.1
Migut.J00060 Erythranthe guttata HOM05D003671 ORTHO05D004285 2.2e-240 836.3 895 55.8
COL.COLO4_30007 Corchorus olitorius HOM05D003671 ORTHO05D004285 8.5e-240 834.3 898 55.8
Potri.006G107500 Populus trichocarpa HOM05D003671 ORTHO05D004285 1.9e-239 833.2 904 56.3
Atru.chr8.2376 Acer truncatum HOM05D003671 ORTHO05D004285 4.0e-237 825.5 896 56.6
TAR636G3051 Trochodendron aralioides HOM05D003671 ORTHO05D004285 6.8e-237 824.7 907 54.6
FAN05G3119 Fragaria x ananassa HOM05D003671 ORTHO05D004285 4.4e-236 822.0 902 54.0
Cfa017060 Carpinus fangiana HOM05D003671 ORTHO05D004285 5.7e-236 821.6 898 55.8
FAN05G5788 Fragaria x ananassa HOM05D003671 ORTHO05D004285 1.3e-235 820.5 902 53.7
Dinv11386 Davidia involucrata HOM05D003671 ORTHO05D004285 6.3e-235 818.1 775 60.5
TAR636G0316 Trochodendron aralioides HOM05D003671 ORTHO05D004285 8.3e-235 817.8 907 54.2
vmacro20357 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 1.4e-234 817.0 887 55.6
Lj3C942T7 Lonicera japonica HOM05D003671 ORTHO05D004285 3.1e-234 815.8 858 57.8
RcHm_v2.0_Chr3g0460911 Rosa chinensis HOM05D003671 ORTHO05D004285 1.6e-233 813.5 906 54.7
FAN14G5445 Fragaria x ananassa HOM05D003671 ORTHO05D004285 2.9e-232 809.3 902 54.3
TAR633G2716 Trochodendron aralioides HOM05D003671 ORTHO05D004285 1.1e-231 807.4 908 53.1
FvH4_6g10170 Fragaria vesca HOM05D003671 ORTHO05D004285 1.9e-231 806.6 902 54.2
Sabra06G0083600 Salix brachista HOM05D003671 ORTHO05D004285 1.9e-231 806.6 903 54.5
Sabra04G0151200 Salix brachista HOM05D003671 ORTHO05D004285 1.3e-227 793.9 901 54.2
SGA_v2.0_scaffold373G50172 Striga asiatica HOM05D003671 ORTHO05D004285 1.3e-227 793.9 896 54.8
Gorai.005G122800 Gossypium raimondii HOM05D003671 ORTHO05D004285 7.0e-226 788.1 890 51.8
Potri.016G133700 Populus trichocarpa HOM05D003671 ORTHO05D004285 8.6e-224 781.2 903 53.7
CiPaw.10G164200 Carya illinoinensis HOM05D003671 ORTHO05D004285 6.8e-221 771.5 862 53.5
QL07p032733 Quercus lobata HOM05D003671 ORTHO05D004285 9.8e-220 767.7 871 54.0
Rhsim04G0122600 Rhododendron simsii HOM05D003671 ORTHO05D004285 2.7e-217 759.6 900 51.3
MD12G1185300 Malus domestica HOM05D003671 ORTHO05D004285 7.8e-217 758.1 906 53.3
TWI77G0322 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 3.0e-216 756.1 897 51.8
Glyma.18G211200 Glycine max HOM05D003671 ORTHO05D004285 2.5e-215 753.1 902 51.6
Oeu026963.1 Olea europaea HOM05D003671 ORTHO05D004285 9.5e-215 751.1 856 54.4
FAN09G2383 Fragaria x ananassa HOM05D003671 ORTHO05D004285 8.0e-214 748.0 912 51.2
FAN02G1273 Fragaria x ananassa HOM05D003671 ORTHO05D004285 4.0e-213 745.7 912 51.9
CANSAT35G0504 Cannabis sativa HOM05D003671 ORTHO05D004285 2.6e-212 743.0 903 52.3
Lj1g0018847 Lotus japonicus HOM05D003671 ORTHO05D004285 2.6e-212 743.0 897 51.7
Eucgr.K01274 Eucalyptus grandis HOM05D003671 ORTHO05D004285 5.8e-212 741.9 889 50.3
MELO3C009114.2 Cucumis melo HOM05D003671 ORTHO05D004285 1.3e-211 740.7 912 50.5
CsaV3_3G033210 Cucumis sativus L. HOM05D003671 ORTHO05D004285 2.9e-211 739.6 912 50.7
Glyma.09G277700 Glycine max HOM05D003671 ORTHO05D004285 1.9e-210 736.9 903 50.8
TWI74G1343 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 2.4e-210 736.5 903 50.8
Glyma.18G212400 Glycine max HOM05D003671 ORTHO05D004285 3.2e-210 736.1 900 51.9
Nn2g10354 Nelumbo nucifera HOM05D003671 ORTHO05D004285 2.1e-209 733.4 911 49.6
Lalb_Chr19g0124051 Lupinus albus HOM05D003671 ORTHO05D004285 2.7e-209 733.0 896 51.7
Gohir.A03G087500 Gossypium hirsutum HOM05D003671 ORTHO05D004285 3.5e-209 732.6 890 52.2
Peaxi162Scf00732g00447 Petunia axillaris HOM05D003671 ORTHO05D004285 6.0e-209 731.9 876 52.7
Gohir.A03G088100 Gossypium hirsutum HOM05D003671 ORTHO05D004285 3.0e-208 729.6 889 52.2
Gohir.D02G108300 Gossypium hirsutum HOM05D003671 ORTHO05D004285 1.1e-207 727.6 889 52.1
PGR004G1797 Punica granatum HOM05D003671 ORTHO05D004285 9.5e-207 724.5 889 48.9
Gorai.005G122900 Gossypium raimondii HOM05D003671 ORTHO05D004285 2.1e-206 723.4 889 52.0
Lalb_Chr03g0043701 Lupinus albus HOM05D003671 ORTHO05D004285 4.7e-206 722.2 900 51.1
ClCG10G022620 Citrullus lanatus HOM05D003671 ORTHO05D004285 6.2e-206 721.8 914 50.3
Cpa.g.sc86.30 Carica papaya HOM05D003671 ORTHO05D004285 1.8e-205 720.3 799 54.3
DCAR_010961 Daucus carota HOM05D003671 ORTHO05D004285 2.3e-205 719.9 840 51.4
arahy.Tifrunner.gnm1.ann1.616PIC Arachis hypogaea HOM05D003671 ORTHO05D004285 8.9e-205 718.0 921 49.6
arahy.Tifrunner.gnm1.ann1.8XV151 Arachis hypogaea HOM05D003671 ORTHO05D004285 1.2e-204 717.6 921 49.6
Glyma.09G277602 Glycine max HOM05D003671 ORTHO05D004285 1.2e-204 717.6 884 50.8
Sed0011007 Sechium edule HOM05D003671 ORTHO05D004285 4.9e-203 712.2 916 49.3
Haze_21142 Corylus avellana HOM05D003671 ORTHO05D004285 8.3e-203 711.4 799 55.1
Phvul.008G084400 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 1.4e-202 710.7 900 50.4
Haze_21147 Corylus avellana HOM05D003671 ORTHO05D004285 3.2e-202 709.5 799 54.9
Lalb_Chr01g0023661 Lupinus albus HOM05D003671 ORTHO05D004285 1.6e-201 707.2 899 49.8
Phvul.008G084500 Phaseolus vulgaris HOM05D003671 ORTHO05D004285 3.5e-201 706.1 901 50.7
DCAR_021427 Daucus carota HOM05D003671 ORTHO05D004285 4.6e-201 705.7 838 52.9
CiPaw.09G218900 Carya illinoinensis HOM05D003671 ORTHO05D004285 6.0e-201 705.3 901 49.8
MD04G1172000 Malus domestica HOM05D003671 ORTHO05D004285 4.3e-199 699.1 903 51.4
Psat0s1450g0040 Pisum sativum HOM05D003671 ORTHO05D004285 9.6e-199 698.0 911 49.9
Ca_07750_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 2.4e-197 693.3 862 51.7
MBI15_g31431_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 6.8e-197 691.8 910 47.9
TWI53G1222 Tripterygium wilfordii HOM05D003671 ORTHO05D004285 2.0e-196 690.3 895 49.4
Ca_07746_v3 Cicer arietinum L. HOM05D003671 ORTHO05D004285 1.9e-194 683.7 900 49.3
VMungo1383G1272 Vigna mungo HOM05D003671 ORTHO05D004285 4.2e-194 682.6 866 51.2
Oeu060440.1 Olea europaea HOM05D003671 ORTHO05D004285 3.5e-193 679.5 839 53.2
Medtr7g072520 Medicago truncatula HOM05D003671 ORTHO05D004285 7.6e-188 661.8 902 49.0
Medtr7g072590 Medicago truncatula HOM05D003671 ORTHO05D004285 9.9e-188 661.4 865 49.4
EL10Ac7g17060 Beta vulgaris HOM05D003671 ORTHO05D004285 1.7e-187 660.6 904 49.9
TPR.G4424 Trifolium pratense HOM05D003671 ORTHO05D004285 2.4e-186 656.8 903 48.0
Hund03740 Selenicereus undatus HOM05D003671 ORTHO05D004285 1.6e-185 654.1 909 47.0
Ah.08g209720 Amaranthus hybridus HOM05D003671 ORTHO05D004285 2.7e-185 653.3 905 47.6
Lj1g0001828 Lotus japonicus HOM05D003671 ORTHO05D004285 7.3e-183 645.2 910 47.9
ECA247G1347 Erigeron canadensis HOM05D003671 ORTHO05D004285 1.3e-182 644.4 895 50.3
Oeu060446.2 Olea europaea HOM05D003671 ORTHO05D004285 6.2e-182 642.1 926 48.3
vmacro08928 Vaccinium macrocarpon HOM05D003671 ORTHO05D004285 1.3e-179 634.4 894 46.3
THA.LOC104806637 Tarenaya hassleriana HOM05D003671 ORTHO05D004285 1.9e-178 630.6 861 48.0
Lalb_Chr07g0190641 Lupinus albus HOM05D003671 ORTHO05D004285 6.7e-176 622.1 900 46.3
AUR62029686 Chenopodium quinoa HOM05D003671 ORTHO05D004285 9.6e-175 618.2 836 48.7
Gohir.D02G108200 Gossypium hirsutum HOM05D003671 ORTHO05D004285 1.9e-170 604.0 773 47.6
Sc07g0005760 Simmondsia chinensis HOM05D003671 ORTHO05D004285 3.3e-167 593.2 905 46.4
Carub.0004s2047 Capsella rubella HOM05D003671 ORTHO05D004285 6.2e-166 589.0 891 46.6
Aa31LG5G23820 Aethionema arabicum HOM05D003671 ORTHO05D004285 8.2e-166 588.6 895 45.3
Thhalv10016251m.g Eutrema salsugineum HOM05D003671 ORTHO05D004285 1.4e-165 587.8 897 45.5
Aqoxy2G00724 Aquilegia oxysepala HOM05D003671 ORTHO05D004285 6.9e-165 585.5 905 44.4
AT3G51640 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 6.9e-165 585.5 897 45.0
unitig_699.g19370 Utricularia gibba HOM05D003671 ORTHO05D004285 1.5e-164 584.3 862 46.8
AT3G51650 Arabidopsis thaliana HOM05D003671 ORTHO05D004285 1.3e-163 581.3 897 44.6
PSO339G1890 Papaver somniferum HOM05D003671 ORTHO05D004285 6.9e-157 558.9 906 44.7
PSO384G1707 Papaver somniferum HOM05D003671 ORTHO05D004285 1.7e-155 554.3 906 44.7
AL4G35770 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 3.2e-154 550.1 879 45.6
Sp4g20820 Schrenkiella parvula HOM05D003671 ORTHO05D004285 3.3e-151 540.0 843 44.7
GSVIVG01030211001 Vitis vinifera HOM05D003671 ORTHO05D004285 3.3e-151 540.0 732 49.2
AL5G32090 Arabidopsis lyrata HOM05D003671 ORTHO05D004285 1.3e-150 538.1 878 43.4
CARHR133180 Cardamine hirsuta HOM05D003671 ORTHO05D004285 2.9e-147 526.9 875 44.1
Psat3g120920 Pisum sativum HOM05D003671 ORTHO05D004285 2.5e-146 523.9 863 44.7
MBI03_g38977_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 6.1e-145 519.2 905 42.3
AUR62006358 Chenopodium quinoa HOM05D003671 ORTHO05D004285 5.1e-144 516.2 775 46.2
BcaB01g00433 Brassica carinata HOM05D003671 ORTHO05D004285 8.2e-142 508.8 878 42.7
BolC8t50300H Brassica oleracea HOM05D003671 ORTHO05D004285 4.1e-141 506.5 876 42.9
BraA09t39938Z Brassica rapa HOM05D003671 ORTHO05D004285 4.1e-141 506.5 872 43.2
BcaB01g00498 Brassica carinata HOM05D003671 ORTHO05D004285 5.3e-141 506.1 875 42.9
BcaB01g00434 Brassica carinata HOM05D003671 ORTHO05D004285 2.9e-139 500.4 894 42.2
C08p26840 Brassica napus HOM05D003671 ORTHO05D004285 6.5e-139 499.2 862 42.8
A09p44780 Brassica napus HOM05D003671 ORTHO05D004285 1.9e-138 497.7 861 43.1
C08p26830 Brassica napus HOM05D003671 ORTHO05D004285 1.4e-136 491.5 891 41.8
CARHR161250 Cardamine hirsuta HOM05D003671 ORTHO05D004285 1.4e-136 491.5 776 44.7
Lsat_1_v5_gn_8_119680 Lactuca sativa HOM05D003671 ORTHO05D004285 5.7e-135 486.1 745 45.1
BolC8t50298H Brassica oleracea HOM05D003671 ORTHO05D004285 2.4e-133 480.7 913 41.2
Psat3g121000 Pisum sativum HOM05D003671 ORTHO05D004285 1.4e-128 464.9 757 44.9
PSO541G0005 Papaver somniferum HOM05D003671 ORTHO05D004285 4.4e-127 459.9 843 40.6
PSO675G2859 Papaver somniferum HOM05D003671 ORTHO05D004285 1.4e-125 454.9 844 41.4
A09p44750 Brassica napus HOM05D003671 ORTHO05D004285 3.1e-125 453.8 911 40.0
BraA09t39936Z Brassica rapa HOM05D003671 ORTHO05D004285 9.1e-125 452.2 914 39.9
HanXRQChr16g0510341 Helianthus annuus HOM05D003671 ORTHO05D004285 6.3e-118 429.5 809 42.6
TPR.G4425 Trifolium pratense HOM05D003671 ORTHO05D004285 1.2e-116 425.2 769 41.0
ECA236G1062 Erigeron canadensis HOM05D003671 ORTHO05D004285 1.1e-114 418.7 899 39.6
HanXRQChr16g0510331 Helianthus annuus HOM05D003671 ORTHO05D004285 2.6e-111 407.5 742 44.1
Sed0014254 Sechium edule HOM05D003671 ORTHO05D004285 1.3e-102 378.6 450 56.4
HPP92_018092 Vanilla planifolia HOM05D003671 ORTHO05D004285 4.7e-97 360.1 892 36.2
Zm00001eb195220 Zea mays HOM05D003671 ORTHO05D004285 9.2e-93 345.9 930 37.2
SpUn1372_0010 Schrenkiella parvula HOM05D003671 ORTHO05D004285 1.3e-91 342.0 403 53.3
Nn5g26901 Nelumbo nucifera HOM05D003671 ORTHO05D004285 2.3e-91 341.3 641 41.7
Zm00001eb406310 Zea mays HOM05D003671 ORTHO05D004285 2.3e-91 341.3 934 37.3
Zm00001eb163960 Zea mays HOM05D003671 ORTHO05D004285 5.8e-87 326.6 777 38.4
CDE07G1826 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 1.9e-85 321.6 900 34.2
CDE04G0380 Ceratophyllum demersum HOM05D003671 ORTHO05D004285 4.1e-85 320.5 901 33.4
HPP92_022854 Vanilla planifolia HOM05D003671 ORTHO05D004654 8.1e-81 306.2 878 33.6
Os11g0113200 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 7.3e-74 283.1 923 34.2
Oeu026958.1 Olea europaea HOM05D003671 ORTHO05D004285 2.1e-73 281.6 502 42.4
Os12g0112600 Oryza sativa ssp. japonica HOM05D003671 ORTHO05D004285 6.2e-73 280.0 921 34.3
Oeu060441.1 Olea europaea HOM05D003671 ORTHO05D004285 2.3e-67 261.5 357 45.1
ATR0012G011 Amborella trichopoda HOM05D003671 ORTHO05D004285 5.1e-67 260.4 968 31.1
SEGI_37069 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.9e-66 258.5 996 32.8
CAN.G179.38 Capsicum annuum HOM05D003671 ORTHO05D004285 2.6e-55 221.5 239 54.8
ATR0681G108 Amborella trichopoda HOM05D003671 ORTHO05D004285 5.8e-55 220.3 416 44.2
VMungo1383G0904 Vigna mungo HOM05D003671 ORTHO05D004285 3.0e-51 208.0 301 40.9
AagrBONN_evm.TU.Sc2ySwM_344.630 Anthoceros agrestis HOM05D003671 ORTHO05D004285 5.1e-51 207.2 351 41.3
Mapoly0100s0047 Marchantia polymorpha HOM05D003671 ORTHO05D004285 1.8e-48 198.7 361 39.6
SEGI_27030 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.7e-46 192.2 298 41.6
Pp3c12_1780 Physcomitrium patens HOM05D003671 ORTHO05D004285 8.5e-46 189.9 345 39.1
SEGI_23390 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.1e-42 179.5 301 41.2
SEGI_38845 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 1.1e-42 179.5 717 29.0
SEGI_35920 Sequoiadendron giganteum HOM05D003671 ORTHO05D004285 5.3e-40 170.6 141 58.2
Sc02g0000840 Simmondsia chinensis HOM05D003671 ORTHO05D004285 1.8e-35 155.6 303 37.3
Haze_23239 Corylus avellana HOM05D003671 ORTHO05D004285 3.0e-35 154.8 326 43.9
Sp5g10620 Schrenkiella parvula HOM05D003671 ORTHO05D004285 2.6e-34 151.8 321 35.2
TPR.G35754 Trifolium pratense HOM05D003671 ORTHO05D004285 1.4e-32 146.0 97 78.4
MBI03_g10316_MAGBIO Magnolia biondii HOM05D003671 ORTHO05D004285 2.0e-31 142.1 109 66.1
ATR0681G103 Amborella trichopoda HOM05D003671 ORTHO05D004285 3.1e-16 91.7 162 39.5
unitig_27.g24881 Utricularia gibba HOM05D003671 ORTHO05D004285 5.9e-07 60.8 65 53.8


User provided reference genes

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