Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G6027.1 Capsicum annuum HOM05D009823 ORTHO05D011888 1.6e-109 399.4 206 100.0
CAN.G1933.1 Capsicum annuum HOM05D009823 ORTHO05D011888 1.0e-103 380.2 203 97.0
CAN.G811.1 Capsicum annuum HOM05D009823 ORTHO05D011888 9.3e-97 357.1 235 81.7
CAN.G166.1 Capsicum annuum HOM05D009823 ORTHO05D011888 1.2e-43 180.6 241 48.5
CAN.G177.16 Capsicum annuum HOM05D000004 ORTHO05D011888 1.7e-34 150.2 235 43.0
CAN.G813.1 Capsicum annuum HOM05D009823 ORTHO05D011888 2.8e-24 116.3 119 55.5
CAN.G11330.1 Capsicum annuum HOM05D009823 ORTHO05D011888 3.6e-24 115.9 153 49.0
CAN.G1683.3 Capsicum annuum HOM05D009823 ORTHO05D011888 2.0e-22 110.2 103 56.3
CAN.G660.14 Capsicum annuum HOM05D009823 ORTHO05D011888 3.4e-22 109.4 104 60.6
CAN.G298.18 Capsicum annuum HOM05D009823 ORTHO05D011888 5.8e-22 108.6 104 57.7
CAN.G716.10 Capsicum annuum HOM05D009823 ORTHO05D011888 4.1e-20 102.4 88 61.4
CAN.G1125.8 Capsicum annuum HOM05D009823 ORTHO05D011888 3.9e-18 95.9 104 55.8
CAN.G1213.6 Capsicum annuum HOM05D009823 ORTHO05D011888 6.6e-18 95.1 104 53.8
CAN.G509.11 Capsicum annuum HOM05D000907 ORTHO05D011888 1.2e-16 90.9 103 52.4
CAN.G1017.2 Capsicum annuum HOM05D009823 ORTHO05D011888 3.6e-16 89.4 117 44.4
CAN.G226.11 Capsicum annuum HOM05D009823 ORTHO05D011888 1.8e-15 87.0 150 41.3
CAN.G277.8 Capsicum annuum HOM05D001060 ORTHO05D011888 3.4e-14 82.8 114 44.7
CAN.G48.23 Capsicum annuum HOM05D009823 ORTHO05D011888 7.5e-14 81.6 93 55.9
CAN.G734.4 Capsicum annuum HOM05D009823 ORTHO05D011888 1.4e-12 77.4 115 42.6
CAN.G764.8 Capsicum annuum HOM05D000541 ORTHO05D000137 1.9e-12 77.0 51 80.4
CAN.G400.16 Capsicum annuum HOM05D009823 ORTHO05D011888 1.1e-09 67.8 101 43.6
Solyc12g005060.1 Solanum lycopersicum HOM05D002975 ORTHO05D003564 1.5e-09 67.4 45 75.6
Sopen12g001060 Solanum pennellii HOM05D002975 ORTHO05D003564 1.5e-09 67.4 45 75.6
CAN.G165.31 Capsicum annuum HOM05D009823 ORTHO05D011888 1.9e-09 67.0 37 78.4
CAN.G1370.2 Capsicum annuum HOM05D002975 ORTHO05D003564 4.3e-09 65.9 44 77.3
Peaxi162Scf00660g00052 Petunia axillaris HOM05D002975 ORTHO05D003564 9.5e-09 64.7 44 75.0
CAN.G185.3 Capsicum annuum HOM05D009823 ORTHO05D011888 1.2e-08 64.3 41 65.9
CAN.G65.22 Capsicum annuum HOM05D009823 ORTHO05D011888 1.6e-08 63.9 83 43.4
Nitab4.5_0000981g0030 Nicotiana tabacum HOM05D002975 ORTHO05D003564 3.6e-08 62.8 44 72.7
PGSC0003DMG400027875 Solanum tuberosum HOM05D002975 ORTHO05D003564 3.6e-08 62.8 44 72.7
Ca_14736_v3 Cicer arietinum L. HOM05D002975 ORTHO05D003564 6.2e-08 62.0 44 70.5
Ah.04g165920 Amaranthus hybridus HOM05D002975 ORTHO05D003564 8.1e-08 61.6 44 72.7
Zm00001eb322600 Zea mays HOM05D002975 ORTHO05D003564 8.1e-08 61.6 44 68.2
Migut.H01823 Erythranthe guttata HOM05D002975 ORTHO05D003564 1.1e-07 61.2 42 73.8
Eucgr.F00755 Eucalyptus grandis HOM05D002975 ORTHO05D003564 1.1e-07 61.2 44 68.2
arahy.Tifrunner.gnm1.ann1.KSV0XM Arachis hypogaea HOM05D002975 ORTHO05D003564 1.4e-07 60.8 44 70.5
GSVIVG01012724001 Vitis vinifera HOM05D002890 ORTHO05D005855 1.4e-07 60.8 45 66.7
arahy.Tifrunner.gnm1.ann1.F6CLKD Arachis hypogaea HOM05D002975 ORTHO05D003564 1.8e-07 60.5 44 70.5
COL.COLO4_31778 Corchorus olitorius HOM05D002975 ORTHO05D003564 1.8e-07 60.5 45 68.9
Peaxi162Scf01102g00015 Petunia axillaris HOM05D002975 ORTHO05D003564 2.3e-07 60.1 45 66.7
PGR083G0161 Punica granatum HOM05D002975 ORTHO05D003564 2.3e-07 60.1 44 65.9
CAN.G243.5 Capsicum annuum HOM05D002493 ORTHO05D011888 4.0e-07 59.3 86 43.0
Glyma.13G204800 Glycine max HOM05D002975 ORTHO05D003564 4.0e-07 59.3 44 65.9
Glyma.15G107900 Glycine max HOM05D002975 ORTHO05D003564 4.0e-07 59.3 44 65.9
CSS0000198 Camellia sinensis var. sinensis HOM05D002975 ORTHO05D003564 5.2e-07 58.9 44 68.2
CAN.G262.17 Capsicum annuum HOM05D000541 ORTHO05D000137 5.2e-07 58.9 38 76.3
CiPaw.10G071300 Carya illinoinensis HOM05D002975 ORTHO05D003564 5.2e-07 58.9 44 65.9
Cc05_g13860 Coffea canephora HOM05D002975 ORTHO05D003564 5.2e-07 58.9 45 62.2
Os07g0513000 Oryza sativa ssp. japonica HOM05D002975 ORTHO05D003564 5.2e-07 58.9 44 63.6
arahy.Tifrunner.gnm1.ann1.B1KDZW Arachis hypogaea HOM05D002975 ORTHO05D003564 6.8e-07 58.5 41 68.3
Nitab4.5_0007084g0010 Nicotiana tabacum HOM05D002975 ORTHO05D003564 6.8e-07 58.5 44 68.2
THA.LOC104808203 Tarenaya hassleriana HOM05D002975 ORTHO05D003564 6.8e-07 58.5 44 63.6
SGA_v2.0_scaffold18G08542 Striga asiatica HOM05D002975 ORTHO05D003564 8.9e-07 58.2 44 65.9
ATR0794G024 Amborella trichopoda HOM05D002975 ORTHO05D003564 1.2e-06 57.8 45 62.2
MSTRG.12977 Avicennia marina HOM05D002975 ORTHO05D003564 1.2e-06 57.8 45 64.4
Lj2P268T28 Lonicera japonica HOM05D002975 ORTHO05D003564 1.5e-06 57.4 45 64.4
Medtr2g023290 Medicago truncatula HOM05D002975 ORTHO05D005855 1.5e-06 57.4 45 64.4
Lsat_1_v5_gn_7_16100 Lactuca sativa HOM05D002975 ORTHO05D003564 2.0e-06 57.0 45 66.7
Potri.011G024700 Populus trichocarpa HOM05D002975 ORTHO05D003564 2.0e-06 57.0 44 63.6
Aa31LG9G9750 Aethionema arabicum HOM05D002975 ORTHO05D003564 2.6e-06 56.6 38 73.7
Phvul.006G044600 Phaseolus vulgaris HOM05D002975 ORTHO05D003564 2.6e-06 56.6 44 61.4
Psat5g178400 Pisum sativum HOM05D002975 ORTHO05D003564 2.6e-06 56.6 44 61.4
Ciclev10008444m.g Citrus clementina HOM05D002975 ORTHO05D003564 3.4e-06 56.2 44 61.4
TWI63G1627 Tripterygium wilfordii HOM05D002975 ORTHO05D003564 3.4e-06 56.2 44 61.4
Actinidia05514 Actinidia chinensis HOM05D002975 ORTHO05D003564 5.8e-06 55.5 44 61.4
CAN.G610.84 Capsicum annuum HOM05D009823 ORTHO05D011888 5.8e-06 55.5 92 41.3
FvH4_3g02060 Fragaria vesca HOM05D002975 ORTHO05D003564 5.8e-06 55.5 44 63.6
THA.LOC104818017 Tarenaya hassleriana HOM05D002975 ORTHO05D003564 5.8e-06 55.5 45 62.2
CiPaw.09G092200 Carya illinoinensis HOM05D002975 ORTHO05D003564 7.5e-06 55.1 44 63.6
RhsimUnG0249800 Rhododendron simsii HOM05D002975 ORTHO05D003564 7.5e-06 55.1 44 68.2
Aqoxy1G02146 Aquilegia oxysepala HOM05D002975 ORTHO05D003564 9.9e-06 54.7 45 60.0
ClCG10G005390 Citrullus lanatus HOM05D002975 ORTHO05D003564 9.9e-06 54.7 47 55.3
Ciclev10015680m.g Citrus clementina HOM05D002975 ORTHO05D003564 9.9e-06 54.7 38 71.1


User provided reference genes

Program Settings