Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G602.9 Capsicum annuum HOM05D005523 ORTHO05D007089 3.6e-42 174.5 87 100.0
CAN.G707.6 Capsicum annuum HOM05D005523 ORTHO05D007089 4.1e-22 107.8 63 82.5
Solyc05g012200.3 Solanum lycopersicum HOM05D005523 ORTHO05D007089 6.6e-20 100.5 58 84.5
Sopen05g007030 Solanum pennellii HOM05D005523 ORTHO05D007089 6.6e-20 100.5 58 84.5
Nitab4.5_0000231g0170 Nicotiana tabacum HOM05D005523 ORTHO05D007089 1.9e-19 99.0 63 77.8
PGSC0003DMG400028314 Solanum tuberosum HOM05D005523 ORTHO05D007089 2.5e-19 98.6 63 77.8
Nitab4.5_0007061g0020 Nicotiana tabacum HOM05D005523 ORTHO05D007089 1.6e-18 95.9 63 76.2
Peaxi162Scf00175g00035 Petunia axillaris HOM05D005523 ORTHO05D007089 2.1e-18 95.5 63 76.2
GSVIVG01012228001 Vitis vinifera HOM05D005523 ORTHO05D007089 1.4e-14 82.8 63 63.5
SalBow2G2481 Salvia bowleyana HOM05D005523 ORTHO05D007089 5.4e-14 80.9 63 63.5
Atru.chr11.1618 Acer truncatum HOM05D005523 ORTHO05D007089 2.1e-13 79.0 57 70.2
MELO3C012156.2 Cucumis melo HOM05D005523 ORTHO05D007089 3.5e-13 78.2 59 62.7
CsaV3_5G033360 Cucumis sativus L. HOM05D005523 ORTHO05D007089 3.5e-13 78.2 59 62.7
ECA234G2689 Erigeron canadensis HOM05D005523 ORTHO05D007089 3.5e-13 78.2 63 60.3
TPR.G34024 Trifolium pratense HOM05D005523 ORTHO05D007089 3.5e-13 78.2 63 63.5
HanXRQChr17g0552771 Helianthus annuus HOM05D005523 ORTHO05D007089 6.0e-13 77.4 56 66.1
Potri.010G157700 Populus trichocarpa HOM05D005523 ORTHO05D007089 6.0e-13 77.4 59 67.8
SGA_v2.0_scaffold16G07795 Striga asiatica HOM05D005523 ORTHO05D007089 6.0e-13 77.4 49 75.5
BcaB03g12091 Brassica carinata HOM05D005523 ORTHO05D007089 7.8e-13 77.0 57 66.7
Ciclev10033727m.g Citrus clementina HOM05D005523 ORTHO05D007089 1.0e-12 76.6 63 61.9
Oeu021803.1 Olea europaea HOM05D005523 ORTHO05D007089 1.0e-12 76.6 55 69.1
Prupe.1G288300 Prunus persica HOM05D005523 ORTHO05D007089 1.0e-12 76.6 55 69.1
TWI79G0260 Tripterygium wilfordii HOM05D005523 ORTHO05D007089 1.0e-12 76.6 52 69.2
CSS0034602 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 1.3e-12 76.3 63 63.5
FvH4_4g29880 Fragaria vesca HOM05D005523 ORTHO05D007089 1.3e-12 76.3 52 71.2
FAN12G2921 Fragaria x ananassa HOM05D005523 ORTHO05D007089 1.3e-12 76.3 52 71.2
FAN17G1793 Fragaria x ananassa HOM05D005523 ORTHO05D007089 1.3e-12 76.3 52 71.2
FAN22G0589 Fragaria x ananassa HOM05D005523 ORTHO05D007089 1.3e-12 76.3 52 71.2
Lsat_1_v5_gn_4_11761 Lactuca sativa HOM05D005523 ORTHO05D007089 1.3e-12 76.3 57 61.4
AT2G03667 Arabidopsis thaliana HOM05D005523 ORTHO05D007089 1.7e-12 75.9 55 67.3
C07p34020 Brassica napus HOM05D005523 ORTHO05D007089 1.7e-12 75.9 57 64.9
BolC7t43916H Brassica oleracea HOM05D005523 ORTHO05D007089 1.7e-12 75.9 57 64.9
Glyma.20G025400 Glycine max HOM05D005523 ORTHO05D007089 1.7e-12 75.9 63 60.3
Manes.05G109800 Manihot esculenta HOM05D005523 ORTHO05D007089 1.7e-12 75.9 57 66.7
Psat7g133840 Pisum sativum HOM05D005523 ORTHO05D007089 1.7e-12 75.9 63 61.9
Sp2g14490 Schrenkiella parvula HOM05D005523 ORTHO05D007089 1.7e-12 75.9 55 69.1
TAR374G1461 Trochodendron aralioides HOM05D005523 ORTHO05D007089 1.7e-12 75.9 51 72.5
EL10Ac6g15006 Beta vulgaris HOM05D005523 ORTHO05D007089 2.3e-12 75.5 51 70.6
A06p43010 Brassica napus HOM05D005523 ORTHO05D007089 2.3e-12 75.5 57 64.9
Cc03_g11190 Coffea canephora HOM05D005523 ORTHO05D007089 2.3e-12 75.5 51 66.7
Cc11_g11910 Coffea canephora HOM05D005523 ORTHO05D007089 2.3e-12 75.5 51 66.7
Phvul.002G101900 Phaseolus vulgaris HOM05D005523 ORTHO05D007089 2.3e-12 75.5 63 58.7
FAN07G2138 Fragaria x ananassa HOM05D005523 ORTHO05D007089 3.0e-12 75.1 52 71.2
Lj4g0005251 Lotus japonicus HOM05D005523 ORTHO05D007089 3.0e-12 75.1 63 60.3
MD16G1060200 Malus domestica HOM05D005523 ORTHO05D007089 3.0e-12 75.1 52 71.2
Aa31LG2G7010 Aethionema arabicum HOM05D005523 ORTHO05D007089 3.9e-12 74.7 63 58.7
Carub.0005s0279 Capsella rubella HOM05D005523 ORTHO05D007089 3.9e-12 74.7 53 69.8
AUR62003091 Chenopodium quinoa HOM05D005523 ORTHO05D007089 3.9e-12 74.7 51 68.6
Lsat_1_v5_gn_5_143020 Lactuca sativa HOM05D005523 ORTHO05D007089 3.9e-12 74.7 55 63.6
DCAR_026677 Daucus carota HOM05D005523 ORTHO05D007089 5.1e-12 74.3 61 62.3
Sed0024899 Sechium edule HOM05D005523 ORTHO05D007089 5.1e-12 74.3 57 63.2
CARHR145990 Cardamine hirsuta HOM05D005523 ORTHO05D007089 6.6e-12 73.9 53 66.0
Hund25171 Selenicereus undatus HOM05D005523 ORTHO05D007089 6.6e-12 73.9 61 65.6
AL5G13440 Arabidopsis lyrata HOM05D005523 ORTHO05D007089 8.7e-12 73.6 52 69.2
Eucgr.G02442 Eucalyptus grandis HOM05D005523 ORTHO05D007089 8.7e-12 73.6 52 71.2
Thhalv10003838m.g Eutrema salsugineum HOM05D005523 ORTHO05D007089 8.7e-12 73.6 53 67.9
BcaB07g30661 Brassica carinata HOM05D005523 ORTHO05D007089 1.1e-11 73.2 53 66.0
THA.LOC104805203 Tarenaya hassleriana HOM05D005523 ORTHO05D007089 1.1e-11 73.2 60 65.0
unitig_26.g10286 Utricularia gibba HOM05D005523 ORTHO05D007089 1.1e-11 73.2 55 67.3
VMungo0251G0731 Vigna mungo HOM05D005523 ORTHO05D007089 1.1e-11 73.2 63 57.1
Aqoxy3G00520 Aquilegia oxysepala HOM05D005523 ORTHO05D007089 1.9e-11 72.4 59 62.7
Gohir.A12G160700 Gossypium hirsutum HOM05D005523 ORTHO05D007089 2.5e-11 72.0 60 58.3
MD13G1061700 Malus domestica HOM05D005523 ORTHO05D007089 2.5e-11 72.0 52 69.2
RcHm_v2.0_Chr4g0438141 Rosa chinensis HOM05D005523 ORTHO05D007089 2.5e-11 72.0 52 67.3
Haze_11899 Corylus avellana HOM05D005523 ORTHO05D007089 3.3e-11 71.6 47 76.6
Migut.L01183 Erythranthe guttata HOM05D005523 ORTHO05D007089 3.3e-11 71.6 53 67.9
Ca_18798_v3 Cicer arietinum L. HOM05D005523 ORTHO05D007089 4.3e-11 71.2 63 61.9
QL03p074024 Quercus lobata HOM05D005523 ORTHO05D007089 4.3e-11 71.2 60 63.3
QL03p074443 Quercus lobata HOM05D005523 ORTHO05D007089 4.3e-11 71.2 60 63.3
Actinidia14169 Actinidia chinensis HOM05D005523 ORTHO05D007089 5.6e-11 70.9 52 67.3
Actinidia28650 Actinidia chinensis HOM05D005523 ORTHO05D007089 5.6e-11 70.9 52 67.3
Actinidia36738 Actinidia chinensis HOM05D005523 ORTHO05D007089 5.6e-11 70.9 52 67.3
MBI19_g25293_MAGBIO Magnolia biondii HOM05D005523 ORTHO05D007089 5.6e-11 70.9 51 68.6
MBI19_g44450_MAGBIO Magnolia biondii HOM05D005523 ORTHO05D007089 5.6e-11 70.9 51 68.6
Sc14g0007970 Simmondsia chinensis HOM05D005523 ORTHO05D007089 7.3e-11 70.5 59 57.6
CANSAT64G1787 Cannabis sativa HOM05D005523 ORTHO05D007089 9.6e-11 70.1 51 66.7
COL.COLO4_27873 Corchorus olitorius HOM05D005523 ORTHO05D007089 9.6e-11 70.1 59 61.0
Gohir.D12G164000 Gossypium hirsutum HOM05D005523 ORTHO05D007089 9.6e-11 70.1 60 58.3
Gorai.008G176600 Gossypium raimondii HOM05D005523 ORTHO05D007089 9.6e-11 70.1 60 58.3
Medtr4g083180 Medicago truncatula HOM05D005523 ORTHO05D007089 9.6e-11 70.1 63 61.9
Nn4g23450 Nelumbo nucifera HOM05D005523 ORTHO05D007089 9.6e-11 70.1 63 57.1
Cfa008872 Carpinus fangiana HOM05D005523 ORTHO05D007089 1.3e-10 69.7 47 74.5
AUR62007908 Chenopodium quinoa HOM05D005523 ORTHO05D007089 1.3e-10 69.7 55 63.6
Duzib251G0966 Durio zibethinus HOM05D005523 ORTHO05D007089 1.3e-10 69.7 55 61.8
Lalb_Chr05g0219911 Lupinus albus HOM05D005523 ORTHO05D007089 1.3e-10 69.7 63 54.0
Thecc.02G329500 Theobroma cacao HOM05D005523 ORTHO05D007089 1.6e-10 69.3 63 58.7
vmacro10430 Vaccinium macrocarpon HOM05D005523 ORTHO05D007089 2.8e-10 68.6 52 61.5
CiPaw.05G124500 Carya illinoinensis HOM05D005523 ORTHO05D007089 3.6e-10 68.2 56 62.5
arahy.Tifrunner.gnm1.ann1.1A68HA Arachis hypogaea HOM05D005523 ORTHO05D007089 4.8e-10 67.8 47 72.3
arahy.Tifrunner.gnm1.ann1.5T11RT Arachis hypogaea HOM05D005523 ORTHO05D007089 4.8e-10 67.8 47 72.3
Rhsim02G0238300 Rhododendron simsii HOM05D005523 ORTHO05D007089 4.8e-10 67.8 52 61.5
PGR119G1690 Punica granatum HOM05D005523 ORTHO05D007089 6.2e-10 67.4 57 56.1
PSO478G5042 Papaver somniferum HOM05D005523 ORTHO05D007089 1.4e-09 66.2 52 63.5
HPP92_001825 Vanilla planifolia HOM05D005523 ORTHO05D007089 2.4e-09 65.5 51 60.8
CDE10G0904 Ceratophyllum demersum HOM05D005523 ORTHO05D007089 4.0e-09 64.7 52 61.5
PSO017G3752 Papaver somniferum HOM05D005523 ORTHO05D007089 4.0e-09 64.7 52 63.5
Zm00001eb029510 Zea mays HOM05D005523 ORTHO05D007089 4.0e-09 64.7 47 63.8
Pp3c13_5080 Physcomitrium patens HOM05D005523 ORTHO05D007089 1.4e-06 56.2 51 51.0
CBR_g50115 Chara braunii HOM05D005523 ORTHO05D007089 7.1e-06 53.9 68 38.2
Mapoly0013s0146 Marchantia polymorpha HOM05D005523 ORTHO05D007089 9.3e-06 53.5 51 49.0


User provided reference genes

Program Settings