Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G600.1 Capsicum annuum HOM05D003430 ORTHO05D004809 9.1e-95 350.1 166 100.0
Sopen11g022460 Solanum pennellii HOM05D000004 ORTHO05D000002 8.4e-56 220.7 149 73.8
Peaxi162Scf00456g00035 Petunia axillaris HOM05D003430 ORTHO05D004809 9.3e-55 217.2 111 91.0
Peaxi162Scf00456g00037 Petunia axillaris HOM05D003430 ORTHO05D004809 9.3e-55 217.2 111 91.0
Solyc00g500224.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 9.3e-55 217.2 111 91.0
Solyc00g500241.1 Solanum lycopersicum HOM05D003430 ORTHO05D004809 9.3e-55 217.2 111 91.0
Sopen00g002720 Solanum pennellii HOM05D003430 ORTHO05D004809 9.3e-55 217.2 111 91.0
Nitab4.5_0010559g0010 Nicotiana tabacum HOM05D003430 ORTHO05D004809 4.3e-52 208.4 111 87.4
Solyc11g039360.2 Solanum lycopersicum HOM05D003430 ORTHO05D004809 4.3e-52 208.4 111 87.4
Nn2g14911 Nelumbo nucifera HOM05D003430 ORTHO05D004809 1.3e-51 206.8 111 86.5
Nn1g10089 Nelumbo nucifera HOM05D003430 ORTHO05D004809 1.6e-51 206.5 111 86.5
PGSC0003DMG400037371 Solanum tuberosum HOM05D003430 ORTHO05D004809 1.6e-51 206.5 111 86.5
Dinv06724 Davidia involucrata HOM05D003430 ORTHO05D004809 2.8e-51 205.7 148 68.9
Lj2C1222G64 Lonicera japonica HOM05D003430 ORTHO05D004809 3.6e-51 205.3 111 85.6
RhsimMtG0004400 Rhododendron simsii HOM05D003430 ORTHO05D004809 6.9e-50 201.1 111 83.8
Hma1.2p1_1286F.1_g273040 Hydrangea macrophylla HOM05D003430 ORTHO05D004809 1.5e-49 199.9 112 84.8
SabraMtG0000400 Salix brachista HOM05D003430 ORTHO05D004809 2.0e-49 199.5 111 82.0
ECA039G0023 Erigeron canadensis HOM05D003430 ORTHO05D004809 9.9e-49 197.2 119 79.8
HanXRQMTg0579531 Helianthus annuus HOM05D003430 ORTHO05D004809 2.2e-48 196.1 111 82.9
Nitab4.5_0003945g0010 Nicotiana tabacum HOM05D003430 ORTHO05D004809 3.8e-48 195.3 111 83.8
Nitab4.5_0004256g0030 Nicotiana tabacum HOM05D003430 ORTHO05D004809 4.9e-48 194.9 111 84.7
Lsat_1_v5_gn_6_109000 Lactuca sativa HOM05D003430 ORTHO05D004809 1.1e-47 193.7 111 81.1
CDE02G0363 Ceratophyllum demersum HOM05D003430 ORTHO05D004809 3.2e-47 192.2 111 81.1
SGA_v2.0_scaffold245G44667 Striga asiatica HOM05D003430 ORTHO05D004809 7.1e-47 191.0 111 82.9
arahy.Tifrunner.gnm1.ann1.41QMJ9 Arachis hypogaea HOM05D003430 ORTHO05D004809 1.6e-46 189.9 113 79.6
arahy.Tifrunner.gnm1.ann1.ABQ8F7 Arachis hypogaea HOM05D003430 ORTHO05D004809 1.6e-46 189.9 113 79.6
arahy.Tifrunner.gnm1.ann1.AJMC4E Arachis hypogaea HOM05D003430 ORTHO05D004809 1.6e-46 189.9 113 79.6
arahy.Tifrunner.gnm1.ann1.CY2VCK Arachis hypogaea HOM05D003430 ORTHO05D004809 1.6e-46 189.9 113 79.6
Medtr0082s0260 Medicago truncatula HOM05D003430 ORTHO05D004809 3.5e-46 188.7 113 80.5
Psat3g040120 Pisum sativum HOM05D003430 ORTHO05D004809 3.5e-46 188.7 113 80.5
VMungo0044G0002 Vigna mungo HOM05D003430 ORTHO05D004809 4.6e-46 188.3 113 80.5
COL.COLO4_04428 Corchorus olitorius HOM05D003430 ORTHO05D004809 7.8e-46 187.6 113 79.6
COL.COLO4_04429 Corchorus olitorius HOM05D003430 ORTHO05D004809 7.8e-46 187.6 113 79.6
Medtr0024s0140 Medicago truncatula HOM05D003430 ORTHO05D004809 1.0e-45 187.2 113 79.6
Ah.01g011780 Amaranthus hybridus HOM05D003430 ORTHO05D004809 1.3e-45 186.8 110 79.1
Ah.10g028080 Amaranthus hybridus HOM05D003430 ORTHO05D004809 1.3e-45 186.8 110 79.1
BcaC05g27378 Brassica carinata HOM05D003430 ORTHO05D004809 3.0e-45 185.7 115 78.3
BolSC28t60411H Brassica oleracea HOM05D003430 ORTHO05D004809 3.0e-45 185.7 115 78.3
Sp3g25650 Schrenkiella parvula HOM05D003430 ORTHO05D004809 3.0e-45 185.7 115 78.3
Sc11g0004420 Simmondsia chinensis HOM05D003430 ORTHO05D004809 3.0e-45 185.7 111 78.4
AUR62042332 Chenopodium quinoa HOM05D003430 ORTHO05D004809 3.9e-45 185.3 110 79.1
Aa31csc1081G20 Aethionema arabicum HOM05D003430 ORTHO05D004809 5.1e-45 184.9 115 78.3
SalBow1G3892 Salvia bowleyana HOM05D003430 ORTHO05D004809 5.1e-45 184.9 111 81.1
arahy.Tifrunner.gnm1.ann1.087TPC Arachis hypogaea HOM05D003430 ORTHO05D004809 8.1e-43 177.6 113 75.2
Ca_28103_v3 Cicer arietinum L. HOM05D003430 ORTHO05D004809 5.3e-42 174.9 103 81.6
Nitab4.5_0001127g0210 Nicotiana tabacum HOM05D003430 ORTHO05D004809 5.3e-42 174.9 100 83.0
Lalb_Chr00c39g0409071 Lupinus albus HOM05D003430 ORTHO05D004809 1.7e-40 169.9 101 81.2
Lalb_Chr00c39g0409251 Lupinus albus HOM05D003430 ORTHO05D004809 1.7e-40 169.9 101 81.2
Lalb_Chr00c51g0413171 Lupinus albus HOM05D003430 ORTHO05D004809 1.7e-40 169.9 101 81.2
Lalb_Chr10g0094601 Lupinus albus HOM05D003430 ORTHO05D004809 1.7e-40 169.9 101 81.2
SHI50824 Sapria himalayana HOM05D003430 ORTHO05D004809 6.4e-40 167.9 113 74.3
unitig_87.g27925 Utricularia gibba HOM05D003430 ORTHO05D004809 6.4e-40 167.9 111 76.6
Zm00001eb435500 Zea mays HOM05D003430 ORTHO05D004809 8.4e-40 167.5 99 76.8
Zm00001eb436090 Zea mays HOM05D003430 ORTHO05D004809 8.4e-40 167.5 99 76.8
Zm00001eb437350 Zea mays HOM05D003430 ORTHO05D004809 8.4e-40 167.5 99 76.8
Zm00001eb440330 Zea mays HOM05D003430 ORTHO05D004809 8.4e-40 167.5 99 76.8
Zm00001eb440360 Zea mays HOM05D003430 ORTHO05D004809 8.4e-40 167.5 99 76.8
Zm00001eb442170 Zea mays HOM05D003430 ORTHO05D004809 8.4e-40 167.5 99 76.8
Solyc00g052430.2 Solanum lycopersicum HOM05D003430 ORTHO05D004809 3.2e-39 165.6 84 91.7
BolC1t03461H Brassica oleracea HOM05D003430 ORTHO05D004809 2.7e-38 162.5 105 76.2
HanXRQChr09g0250621 Helianthus annuus HOM05D003430 ORTHO05D004809 4.6e-38 161.8 93 80.6
SHI29634 Sapria himalayana HOM05D003430 ORTHO05D004809 3.0e-37 159.1 106 73.6
SHI42478 Sapria himalayana HOM05D003430 ORTHO05D004809 6.7e-37 157.9 136 63.2
Cfa023013 Carpinus fangiana HOM05D003430 ORTHO05D004809 2.1e-35 152.9 84 84.5
DCAR_032431 Daucus carota HOM05D003430 ORTHO05D004809 1.4e-34 150.2 92 77.2
Lj2C1231G44 Lonicera japonica HOM05D003430 ORTHO05D004809 1.4e-34 150.2 80 86.2
Nitab4.5_0000172g0240 Nicotiana tabacum HOM05D003430 ORTHO05D004809 2.4e-34 149.4 83 84.3
CANSAT16G0003 Cannabis sativa HOM05D003430 ORTHO05D004809 5.3e-34 148.3 84 82.1
Gorai.001G162300 Gossypium raimondii HOM05D003430 ORTHO05D004809 2.0e-33 146.4 89 79.8
Thhalv10002931m.g Eutrema salsugineum HOM05D003430 ORTHO05D004809 1.7e-32 143.3 95 72.6
HanXRQChr00c0055g0571401 Helianthus annuus HOM05D003430 ORTHO05D004809 2.2e-32 142.9 83 80.7
Lalb_Chr00c21g0406111 Lupinus albus HOM05D003430 ORTHO05D004809 1.4e-31 140.2 86 80.2
TPR.G13784 Trifolium pratense HOM05D003430 ORTHO05D004809 1.9e-31 139.8 86 79.1
arahy.Tifrunner.gnm1.ann1.J6HUIG Arachis hypogaea HOM05D003430 ORTHO05D026951 2.5e-31 139.4 86 77.9
A04p09460 Brassica napus HOM05D003430 ORTHO05D004809 3.5e-30 135.6 96 69.8
BraSC177t45748Z Brassica rapa HOM05D003430 ORTHO05D004809 3.5e-30 135.6 96 69.8
RcHm_v2.0_MTg0498431 Rosa chinensis HOM05D003430 ORTHO05D004809 6.0e-30 134.8 92 71.7
SHI31749 Sapria himalayana HOM05D003430 ORTHO05D004809 7.9e-30 134.4 82 75.6
ATMG00180 Arabidopsis thaliana HOM05D003430 ORTHO05D004809 1.0e-29 134.0 88 75.0
CARHR282710 Cardamine hirsuta HOM05D003430 ORTHO05D004809 1.0e-29 134.0 88 75.0
CARHR288640 Cardamine hirsuta HOM05D003430 ORTHO05D004809 1.0e-29 134.0 88 75.0
Nitab4.5_0000172g1130 Nicotiana tabacum HOM05D003430 ORTHO05D004809 3.8e-24 115.5 61 85.2
Nitab4.5_0001152g0350 Nicotiana tabacum HOM05D003430 ORTHO05D004809 1.6e-22 110.2 59 83.1
HanXRQChr11g0335401 Helianthus annuus HOM05D003430 ORTHO05D004809 1.6e-19 100.1 59 79.7
Gorai.002G142200 Gossypium raimondii HOM05D003430 ORTHO05D004809 1.2e-17 94.0 77 64.9
HPP92_026915 Vanilla planifolia HOM05D003430 ORTHO05D004809 1.5e-17 93.6 71 62.0
SHI04803 Sapria himalayana HOM05D003430 ORTHO05D004809 3.2e-15 85.9 79 55.7
SHI04802 Sapria himalayana HOM05D003430 ORTHO05D004809 2.7e-14 82.8 77 54.5
Gohir.D01G116901 Gossypium hirsutum HOM05D003430 ORTHO05D004809 3.6e-14 82.4 51 76.5
SHI25674 Sapria himalayana HOM05D003430 ORTHO05D004809 6.7e-13 78.2 62 59.7
Gorai.013G212800 Gossypium raimondii HOM05D007668 ORTHO05D006662 5.3e-10 68.6 45 71.1
SHI20517 Sapria himalayana HOM05D003430 ORTHO05D004809 9.1e-10 67.8 81 51.9
LjContig00439g0009782 Lotus japonicus HOM05D003430 ORTHO05D004809 1.5e-09 67.0 37 81.1
LjContig00446g0005008 Lotus japonicus HOM05D003430 ORTHO05D004809 1.5e-09 67.0 37 81.1
BraSC48t46245Z Brassica rapa HOM05D003430 ORTHO05D004809 1.0e-08 64.3 40 70.0
BraSC54t46373Z Brassica rapa HOM05D003430 ORTHO05D004809 1.0e-08 64.3 40 70.0
BraSC77t46628Z Brassica rapa HOM05D003430 ORTHO05D004809 1.0e-08 64.3 40 70.0


User provided reference genes

Program Settings