Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G60.10 Capsicum annuum HOM05D004537 ORTHO05D005492 2.4e-72 275.4 137 100.0
Gorai.013G213100 Gossypium raimondii HOM05D004537 ORTHO05D005492 1.0e-43 180.3 165 61.2
Sed0009736 Sechium edule HOM05D004537 ORTHO05D005492 1.0e-43 180.3 133 72.9
Nitab4.5_0000866g0210 Nicotiana tabacum HOM05D004537 ORTHO05D005492 1.8e-43 179.5 134 68.7
CAN.G1109.10 Capsicum annuum HOM05D004537 ORTHO05D005492 2.3e-43 179.1 165 61.2
CAN.G1167.11 Capsicum annuum HOM05D004537 ORTHO05D005492 2.3e-43 179.1 165 61.2
CAN.G78.1 Capsicum annuum HOM05D004537 ORTHO05D005492 2.3e-43 179.1 165 61.2
Cpa.g.sc263.4 Carica papaya HOM05D004537 ORTHO05D005492 2.3e-43 179.1 165 61.2
DCAR_032457 Daucus carota HOM05D004537 ORTHO05D005492 2.3e-43 179.1 165 61.2
Gorai.001G162500 Gossypium raimondii HOM05D004537 ORTHO05D005492 2.3e-43 179.1 165 61.2
QL10p061777 Quercus lobata HOM05D004537 ORTHO05D005492 2.3e-43 179.1 165 61.2
Sed0020696 Sechium edule HOM05D004537 ORTHO05D005492 2.3e-43 179.1 165 61.2
Solyc00g500186.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 2.3e-43 179.1 165 61.2
Solyc00g500250.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 2.3e-43 179.1 165 61.2
Solyc00g500349.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 2.3e-43 179.1 165 61.2
Solyc11g063610.3 Solanum lycopersicum HOM05D004537 ORTHO05D005492 2.3e-43 179.1 169 60.4
Sopen05g012670 Solanum pennellii HOM05D004537 ORTHO05D005492 2.3e-43 179.1 165 61.2
PGSC0003DMG400002971 Solanum tuberosum HOM05D004537 ORTHO05D005492 2.3e-43 179.1 165 61.2
arahy.Tifrunner.gnm1.ann1.FSQ0ED Arachis hypogaea HOM05D004537 ORTHO05D005492 1.5e-42 176.4 165 60.6
arahy.Tifrunner.gnm1.ann1.JYE7Y9 Arachis hypogaea HOM05D004537 ORTHO05D005492 1.5e-42 176.4 165 60.6
Ca_07436_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 1.5e-42 176.4 165 60.6
Ca_30901_v3 Cicer arietinum L. HOM05D004537 ORTHO05D005492 1.5e-42 176.4 165 60.6
LjContig00315g0003687 Lotus japonicus HOM05D004537 ORTHO05D005492 1.5e-42 176.4 165 60.6
Nitab4.5_0001761g0020 Nicotiana tabacum HOM05D004537 ORTHO05D005492 4.3e-42 174.9 165 60.6
Actinidia34915 Actinidia chinensis HOM05D004537 ORTHO05D005492 7.4e-42 174.1 165 60.0
HanXRQChr10g0310851 Helianthus annuus HOM05D004537 ORTHO05D005492 1.3e-41 173.3 165 60.0
HanXRQChr14g0433461 Helianthus annuus HOM05D004537 ORTHO05D005492 1.3e-41 173.3 165 60.0
HanXRQMTg0579341 Helianthus annuus HOM05D004537 ORTHO05D005492 1.3e-41 173.3 165 60.0
Hma1.2p1_0136F.1_g062006 Hydrangea macrophylla HOM05D004537 ORTHO05D005492 1.3e-41 173.3 165 60.0
arahy.Tifrunner.gnm1.ann1.QL9R2N Arachis hypogaea HOM05D004537 ORTHO05D005492 3.7e-41 171.8 165 59.4
Dinv06725 Davidia involucrata HOM05D004537 ORTHO05D005492 4.8e-41 171.4 165 59.4
arahy.Tifrunner.gnm1.ann1.19WC2D Arachis hypogaea HOM05D004537 ORTHO05D005492 6.9e-40 167.5 141 66.7
Nn1g10090 Nelumbo nucifera HOM05D004537 ORTHO05D005492 6.9e-40 167.5 166 58.4
Ah.00g237940 Amaranthus hybridus HOM05D004537 ORTHO05D005492 1.2e-39 166.8 165 58.8
ATMG01360 Arabidopsis thaliana HOM05D004537 ORTHO05D005492 1.2e-39 166.8 165 58.8
A04p09350 Brassica napus HOM05D004537 ORTHO05D005492 1.2e-39 166.8 165 58.8
BolSC28t60311H Brassica oleracea HOM05D004537 ORTHO05D005492 1.2e-39 166.8 165 58.8
BolSC28t60367H Brassica oleracea HOM05D004537 ORTHO05D005492 1.2e-39 166.8 165 58.8
BraSC159t45726Z Brassica rapa HOM05D004537 ORTHO05D005492 1.2e-39 166.8 165 58.8
BraSC48t46236Z Brassica rapa HOM05D004537 ORTHO05D005492 1.2e-39 166.8 165 58.8
CANSAT16G0002 Cannabis sativa HOM05D004537 ORTHO05D005492 1.2e-39 166.8 165 58.8
CARHR283530 Cardamine hirsuta HOM05D004537 ORTHO05D005492 1.2e-39 166.8 165 58.8
RcHm_v2.0_Chr6g0256731 Rosa chinensis HOM05D004537 ORTHO05D005492 1.2e-39 166.8 165 58.8
SabraMtG0005600 Salix brachista HOM05D004537 ORTHO05D005492 1.2e-39 166.8 165 58.8
Sp3g25790 Schrenkiella parvula HOM05D004537 ORTHO05D005492 1.2e-39 166.8 165 58.8
Sc08g0004810 Simmondsia chinensis HOM05D004537 ORTHO05D005492 1.2e-39 166.8 165 58.8
Aqoxy12s002 Aquilegia oxysepala HOM05D004537 ORTHO05D005492 2.6e-39 165.6 165 58.8
QL04p031979 Quercus lobata HOM05D004537 ORTHO05D005492 2.6e-39 165.6 160 60.0
ClCG04G003500 Citrullus lanatus HOM05D004537 ORTHO05D005492 4.5e-39 164.9 167 58.1
Nitab4.5_0001127g0230 Nicotiana tabacum HOM05D004537 ORTHO05D005492 9.4e-37 157.1 165 55.8
CAN.G999.40 Capsicum annuum HOM05D004537 ORTHO05D005492 2.1e-36 156.0 122 67.2
HanXRQChr04g0127251 Helianthus annuus HOM05D004537 ORTHO05D005492 6.7e-35 151.0 153 58.8
SEGI_28485 Sequoiadendron giganteum HOM05D004537 ORTHO05D005492 4.4e-34 148.3 168 54.2
Sed0024638 Sechium edule HOM05D004537 ORTHO05D005492 7.4e-34 147.5 137 62.0
Lalb_Chr11g0071071 Lupinus albus HOM05D004537 ORTHO05D005492 9.7e-34 147.1 99 74.7
Gohir.D04G096416 Gossypium hirsutum HOM05D004537 ORTHO05D005492 1.3e-33 146.7 149 60.4
SHI26645 Sapria himalayana HOM05D004537 ORTHO05D005492 9.1e-32 140.6 93 76.3
Ah.01g011750 Amaranthus hybridus HOM05D004537 ORTHO05D005492 2.0e-31 139.4 93 76.3
AUR62042353 Chenopodium quinoa HOM05D004537 ORTHO05D005492 2.0e-31 139.4 93 76.3
RhsimMtG0000400 Rhododendron simsii HOM05D004537 ORTHO05D005492 2.0e-31 139.4 93 76.3
Migut.E01634 Erythranthe guttata HOM05D004537 ORTHO05D005492 5.9e-31 137.9 119 65.5
AUR62026821 Chenopodium quinoa HOM05D004537 ORTHO05D005492 1.7e-30 136.3 93 77.4
Migut.E00896 Erythranthe guttata HOM05D004537 ORTHO05D005492 1.1e-29 133.7 118 65.3
Pp3c4_28940 Physcomitrium patens HOM05D004537 ORTHO05D005492 3.2e-29 132.1 93 72.0
Pp3c4_28946 Physcomitrium patens HOM05D004537 ORTHO05D005492 3.2e-29 132.1 93 72.0
CDE02G4726 Ceratophyllum demersum HOM05D004537 ORTHO05D005492 1.6e-28 129.8 93 73.1
SHI26666 Sapria himalayana HOM05D004537 ORTHO05D005492 2.7e-28 129.0 98 66.3
SHI35293 Sapria himalayana HOM05D004537 ORTHO05D005492 1.5e-26 123.2 78 82.1
Lalb_Chr00c21g0405801 Lupinus albus HOM05D004537 ORTHO05D005492 5.7e-26 121.3 147 51.7
SHI27476 Sapria himalayana HOM05D004537 ORTHO05D005492 9.7e-26 120.6 86 69.8
Solyc07g019510.4 Solanum lycopersicum HOM05D004537 ORTHO05D005492 6.3e-25 117.9 128 53.1
Haze_27145 Corylus avellana HOM05D004537 ORTHO05D005492 1.6e-23 113.2 117 56.4
GSVIVG01020676001 Vitis vinifera HOM05D004537 ORTHO05D005492 5.9e-23 111.3 93 64.5
MELO3C021523.2 Cucumis melo HOM05D004537 ORTHO05D005492 7.7e-23 110.9 80 68.8
Ah.14g079610 Amaranthus hybridus HOM05D004537 ORTHO05D005492 7.2e-21 104.4 64 79.7
Psat0s12108g0080 Pisum sativum HOM05D004537 ORTHO05D005492 7.2e-21 104.4 64 79.7
unitig_87.g28000 Utricularia gibba HOM05D004537 ORTHO05D005492 7.2e-21 104.4 64 79.7
HanXRQChr08g0236111 Helianthus annuus HOM05D004537 ORTHO05D005492 4.0e-19 98.6 64 76.6
SHI26667 Sapria himalayana HOM05D004537 ORTHO05D005492 4.0e-19 98.6 94 61.7
HanXRQChr04g0127221 Helianthus annuus HOM05D004537 ORTHO05D005492 1.3e-17 93.6 116 52.6
LjContig00315g0010412 Lotus japonicus HOM05D004537 ORTHO05D005492 2.8e-17 92.4 56 82.1
COL.COLO4_04173 Corchorus olitorius HOM05D004537 ORTHO05D005492 6.3e-17 91.3 112 50.9
Medtr8g106255 Medicago truncatula HOM05D004537 ORTHO05D005492 6.3e-17 91.3 56 80.4
MD13G1127000 Malus domestica HOM05D004537 ORTHO05D005492 1.1e-16 90.5 160 40.6
Solyc08g029280.2 Solanum lycopersicum HOM05D004537 ORTHO05D005492 1.4e-16 90.1 122 45.9
ClCG09G001530 Citrullus lanatus HOM05D004537 ORTHO05D005492 2.4e-16 89.4 59 76.3
EL10Ac5g12442 Beta vulgaris HOM05D004537 ORTHO05D005492 4.5e-15 85.1 121 45.5
Haze_27101 Corylus avellana HOM05D004537 ORTHO05D005492 2.5e-13 79.3 164 32.9
SHI20134 Sapria himalayana HOM05D004537 ORTHO05D005492 2.5e-13 79.3 51 74.5
SMO053G0009 Selaginella moellendorffii HOM05D004537 ORTHO05D005492 7.2e-13 77.8 167 37.7
Nitab4.5_0000592g0100 Nicotiana tabacum HOM05D004537 ORTHO05D005492 1.6e-12 76.6 105 50.5
Mapoly0006s0021 Marchantia polymorpha HOM05D004537 ORTHO05D005492 8.0e-12 74.3 51 74.5
Nitab4.5_0000019g0180 Nicotiana tabacum HOM05D004537 ORTHO05D005492 3.0e-11 72.4 127 44.1
Glyma.03G094400 Glycine max HOM05D004537 ORTHO05D005492 1.2e-10 70.5 46 76.1
CAN.G416.37 Capsicum annuum HOM05D004537 ORTHO05D005492 3.4e-10 68.9 45 73.3
MELO3C027747.2 Cucumis melo HOM05D004537 ORTHO05D005492 3.4e-10 68.9 45 73.3
SHI01747 Sapria himalayana HOM05D004537 ORTHO05D005492 5.4e-08 61.6 86 53.5
CAN.G505.7 Capsicum annuum HOM05D004537 ORTHO05D005492 1.3e-06 57.0 39 76.9
CAN.G61.11 Capsicum annuum HOM05D004537 ORTHO05D005492 2.3e-06 56.2 142 38.7
Solyc02g021770.1 Solanum lycopersicum HOM05D004537 ORTHO05D005492 2.9e-06 55.8 39 71.8
unitig_87.g28001 Utricularia gibba HOM05D004537 ORTHO05D005492 3.8e-06 55.5 75 45.3


User provided reference genes

Program Settings