Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G5998.1 Capsicum annuum HOM05D002518 ORTHO05D002630 5.2e-79 297.7 161 100.0
CAN.G309.105 Capsicum annuum HOM05D002518 ORTHO05D002630 1.1e-73 280.0 152 99.3
CAN.G134.149 Capsicum annuum HOM05D002518 ORTHO05D002630 4.0e-63 245.0 161 85.1
CAN.G2026.3 Capsicum annuum HOM05D002518 ORTHO05D002630 6.9e-63 244.2 162 85.2
CAN.G792.7 Capsicum annuum HOM05D002518 ORTHO05D002630 6.9e-63 244.2 161 85.1
CAN.G567.118 Capsicum annuum HOM05D002496 ORTHO05D002787 5.8e-62 241.1 161 83.9
CAN.G7504.1 Capsicum annuum HOM05D002518 ORTHO05D002630 5.8e-62 241.1 161 83.2
CAN.G486.4 Capsicum annuum HOM05D002518 ORTHO05D002630 1.3e-61 240.0 161 83.9
CAN.G551.1 Capsicum annuum HOM05D002518 ORTHO05D002630 2.2e-61 239.2 161 83.2
CAN.G10736.1 Capsicum annuum HOM05D002518 ORTHO05D002630 2.9e-61 238.8 161 82.6
CAN.G1563.4 Capsicum annuum HOM05D002518 ORTHO05D002630 6.4e-61 237.7 161 82.6
CAN.G4577.1 Capsicum annuum HOM05D002518 ORTHO05D002630 7.1e-60 234.2 161 83.2
CAN.G567.117 Capsicum annuum HOM05D002518 ORTHO05D002630 1.6e-59 233.0 161 80.1
CAN.G1703.8 Capsicum annuum HOM05D002518 ORTHO05D002630 6.0e-59 231.1 157 83.4
CAN.G1703.4 Capsicum annuum HOM05D002518 ORTHO05D002630 2.3e-58 229.2 161 81.4
CAN.G2462.1 Capsicum annuum HOM05D002518 ORTHO05D002630 8.1e-56 220.7 147 84.4
CAN.G1751.15 Capsicum annuum HOM05D002518 ORTHO05D002630 6.9e-55 217.6 147 83.0
CAN.G1563.7 Capsicum annuum HOM05D002518 ORTHO05D002630 1.5e-54 216.5 147 83.0
CAN.G2802.2 Capsicum annuum HOM05D002518 ORTHO05D002630 1.5e-54 216.5 147 84.4
CAN.G1578.25 Capsicum annuum HOM05D002518 ORTHO05D002630 2.0e-54 216.1 141 85.8
CAN.G792.1 Capsicum annuum HOM05D002518 ORTHO05D002630 7.6e-54 214.2 153 79.7
CAN.G309.97 Capsicum annuum HOM05D002518 ORTHO05D002630 1.3e-53 213.4 147 83.7
CAN.G575.109 Capsicum annuum HOM05D002518 ORTHO05D002630 6.4e-53 211.1 161 76.4
CAN.G1783.3 Capsicum annuum HOM05D002518 ORTHO05D002630 8.4e-53 210.7 147 82.3
CAN.G1353.7 Capsicum annuum HOM05D002518 ORTHO05D002630 4.2e-52 208.4 146 80.8
CAN.G567.120 Capsicum annuum HOM05D002518 ORTHO05D002630 5.4e-52 208.0 148 79.7
CAN.G134.141 Capsicum annuum HOM05D002518 ORTHO05D002630 6.0e-51 204.5 135 82.2
CAN.G134.144 Capsicum annuum HOM05D002518 ORTHO05D002630 6.0e-51 204.5 161 73.3
CAN.G309.111 Capsicum annuum HOM05D002518 ORTHO05D002630 6.0e-51 204.5 158 76.6
CAN.G1579.3 Capsicum annuum HOM05D002518 ORTHO05D002630 1.0e-50 203.8 143 81.1
CAN.G1563.6 Capsicum annuum HOM05D002518 ORTHO05D002630 3.0e-50 202.2 147 78.2
CAN.G1563.5 Capsicum annuum HOM05D002518 ORTHO05D002630 1.5e-49 199.9 161 72.7
CAN.G282.58 Capsicum annuum HOM05D002518 ORTHO05D002630 1.9e-49 199.5 135 81.5
CAN.G1353.12 Capsicum annuum HOM05D002518 ORTHO05D002630 2.5e-49 199.1 147 78.9
CAN.G1669.11 Capsicum annuum HOM05D002518 ORTHO05D002630 1.3e-48 196.8 160 72.5
CAN.G1669.6 Capsicum annuum HOM05D002518 ORTHO05D002630 1.4e-47 193.4 137 78.8
CAN.G3770.1 Capsicum annuum HOM05D002518 ORTHO05D002630 2.9e-45 185.7 132 80.3
CAN.G309.99 Capsicum annuum HOM05D002496 ORTHO05D002787 3.0e-42 175.6 151 69.5
CAN.G1579.14 Capsicum annuum HOM05D002496 ORTHO05D002787 3.9e-42 175.3 109 88.1
CAN.G1353.17 Capsicum annuum HOM05D002518 ORTHO05D002630 1.1e-41 173.7 138 73.2
CAN.G1039.3 Capsicum annuum HOM05D002518 ORTHO05D002630 5.6e-41 171.4 166 61.4
CAN.G2026.8 Capsicum annuum HOM05D002518 ORTHO05D002630 1.4e-39 166.8 161 64.6
CAN.G5735.1 Capsicum annuum HOM05D002518 ORTHO05D002630 1.4e-39 166.8 178 59.0
CAN.G134.152 Capsicum annuum HOM05D002518 ORTHO05D002630 2.4e-39 166.0 124 77.4
CAN.G309.133 Capsicum annuum HOM05D002518 ORTHO05D002630 6.5e-37 157.9 152 65.8
CAN.G2376.2 Capsicum annuum HOM05D002496 ORTHO05D002787 2.5e-36 156.0 145 65.5
CAN.G641.54 Capsicum annuum HOM05D005026 ORTHO05D005981 9.3e-36 154.1 141 68.1
CAN.G1353.19 Capsicum annuum HOM05D002496 ORTHO05D002787 2.7e-35 152.5 154 63.6
CAN.G309.135 Capsicum annuum HOM05D002496 ORTHO05D002787 3.5e-35 152.1 94 86.2
CAN.G309.132 Capsicum annuum HOM05D002496 ORTHO05D002787 3.0e-34 149.1 147 62.6
CAN.G1579.6 Capsicum annuum HOM05D002518 ORTHO05D002630 1.5e-33 146.7 148 65.5
CAN.G309.146 Capsicum annuum HOM05D002496 ORTHO05D002787 3.3e-33 145.6 148 64.9
CAN.G792.6 Capsicum annuum HOM05D002518 ORTHO05D002630 1.6e-32 143.3 102 79.4
CAN.G134.157 Capsicum annuum HOM05D002496 ORTHO05D002787 6.3e-32 141.4 153 58.8
CAN.G486.2 Capsicum annuum HOM05D002518 ORTHO05D002630 9.0e-31 137.5 102 76.5
CAN.G309.141 Capsicum annuum HOM05D002518 ORTHO05D002630 4.5e-30 135.2 102 75.5
CAN.G1783.4 Capsicum annuum HOM05D002496 ORTHO05D002787 1.0e-29 134.0 88 84.1
CAN.G309.118 Capsicum annuum HOM05D002518 ORTHO05D002630 1.7e-29 133.3 95 80.0
CAN.G2026.5 Capsicum annuum HOM05D002518 ORTHO05D002630 1.4e-28 130.2 97 76.3
CAN.G1353.20 Capsicum annuum HOM05D002048 ORTHO05D002630 2.1e-27 126.3 100 72.0
CAN.G575.110 Capsicum annuum HOM05D002518 ORTHO05D002630 3.6e-27 125.6 105 70.5
CAN.G1353.3 Capsicum annuum HOM05D002496 ORTHO05D002787 6.7e-26 121.3 85 77.6
CAN.G1353.22 Capsicum annuum HOM05D002496 ORTHO05D002787 2.5e-25 119.4 120 61.7
CAN.G309.108 Capsicum annuum HOM05D002518 ORTHO05D002630 2.4e-23 112.8 76 78.9
CAN.G309.142 Capsicum annuum HOM05D002518 ORTHO05D002146 1.5e-22 110.2 118 57.6
CAN.G134.146 Capsicum annuum HOM05D002518 ORTHO05D002630 2.2e-21 106.3 105 62.9
CAN.G6001.1 Capsicum annuum HOM05D002518 ORTHO05D002630 2.9e-21 105.9 71 84.5
CAN.G309.102 Capsicum annuum HOM05D002048 ORTHO05D002146 6.5e-21 104.8 76 75.0
CAN.G1465.17 Capsicum annuum HOM05D002518 ORTHO05D002630 7.2e-20 101.3 78 79.5
CAN.G1039.4 Capsicum annuum HOM05D002518 ORTHO05D002630 1.6e-19 100.1 71 80.3
CAN.G11366.1 Capsicum annuum HOM05D002518 ORTHO05D002630 4.7e-19 98.6 71 78.9
CAN.G10644.1 Capsicum annuum HOM05D002518 ORTHO05D002630 1.0e-18 97.4 71 78.9
CAN.G309.100 Capsicum annuum HOM05D002496 ORTHO05D002787 1.1e-17 94.0 119 52.9
Nitab4.5_0003965g0010 Nicotiana tabacum HOM05D002518 ORTHO05D002630 2.6e-17 92.8 71 74.6
PGSC0003DMG401023504 Solanum tuberosum HOM05D002518 ORTHO05D002630 5.7e-17 91.7 71 71.8
CAN.G1669.2 Capsicum annuum HOM05D008784 ORTHO05D002630 7.4e-17 91.3 71 74.6
Nitab4.5_0000914g0070 Nicotiana tabacum HOM05D002518 ORTHO05D002630 2.8e-16 89.4 71 70.4
CAN.G309.113 Capsicum annuum HOM05D002496 ORTHO05D002787 6.3e-16 88.2 63 77.8
Sopen05g033390 Solanum pennellii HOM05D002518 ORTHO05D002630 8.2e-16 87.8 71 71.8
CAN.G309.125 Capsicum annuum HOM05D002496 ORTHO05D002787 2.4e-15 86.3 111 53.2
Solyc05g054930.3 Solanum lycopersicum HOM05D002518 ORTHO05D002630 2.4e-15 86.3 71 70.4
CAN.G309.130 Capsicum annuum HOM05D002496 ORTHO05D002787 9.1e-15 84.3 97 54.6
Peaxi162Scf00015g00273 Petunia axillaris HOM05D002518 ORTHO05D002630 1.2e-14 84.0 71 67.6
Actinidia03008 Actinidia chinensis HOM05D002518 ORTHO05D002630 1.7e-13 80.1 71 60.6
Dinv31385 Davidia involucrata HOM05D002518 ORTHO05D002630 1.1e-12 77.4 68 61.8
Hma1.2p1_0207F.1_g088000 Hydrangea macrophylla HOM05D002518 ORTHO05D002630 1.9e-12 76.6 68 58.8
Actinidia38230 Actinidia chinensis HOM05D002518 ORTHO05D002630 4.2e-12 75.5 71 57.7
Dinv25940 Davidia involucrata HOM05D002518 ORTHO05D002630 4.2e-12 75.5 85 52.9
Lj1A929T68 Lonicera japonica HOM05D002518 ORTHO05D002630 7.2e-12 74.7 68 58.8
Rhsim03G0121000 Rhododendron simsii HOM05D002518 ORTHO05D002630 9.4e-12 74.3 71 59.2
vmacro07106 Vaccinium macrocarpon HOM05D002518 ORTHO05D002630 1.2e-11 73.9 71 57.7
CAN.G1833.6 Capsicum annuum HOM05D002496 ORTHO05D002787 2.7e-11 72.8 50 84.0
CAN.G2070.1 Capsicum annuum HOM05D002518 ORTHO05D002630 4.7e-11 72.0 50 82.0
Cfa001564 Carpinus fangiana HOM05D002518 ORTHO05D002630 1.0e-10 70.9 85 52.9
Haze_16965 Corylus avellana HOM05D002518 ORTHO05D002630 1.8e-10 70.1 85 50.6
Oeu050634.1 Olea europaea HOM05D002518 ORTHO05D002630 1.8e-10 70.1 71 53.5
GSVIVG01032635001 Vitis vinifera HOM05D002518 ORTHO05D002630 2.3e-10 69.7 85 48.2
CAN.G1751.10 Capsicum annuum HOM05D002518 ORTHO05D002630 3.0e-10 69.3 50 80.0
CAN.G2101.2 Capsicum annuum HOM05D002518 ORTHO05D002630 3.0e-10 69.3 51 82.4
CAN.G309.143 Capsicum annuum HOM05D002496 ORTHO05D002630 3.0e-10 69.3 113 46.0
MSTRG.8231 Avicennia marina HOM05D002518 ORTHO05D002630 3.9e-10 68.9 71 52.1
CAN.G1669.3 Capsicum annuum HOM05D002518 ORTHO05D002630 5.2e-10 68.6 50 78.0
CAN.G2119.2 Capsicum annuum HOM05D002496 ORTHO05D002787 5.2e-10 68.6 48 81.2
Cc02_g08710 Coffea canephora HOM05D002518 ORTHO05D002630 5.2e-10 68.6 70 54.3
CiPaw.01G279100 Carya illinoinensis HOM05D002518 ORTHO05D002630 6.7e-10 68.2 70 54.3
Manes.07G106100 Manihot esculenta HOM05D002518 ORTHO05D002630 6.7e-10 68.2 67 52.2
CSS0012201 Camellia sinensis var. sinensis HOM05D002518 ORTHO05D002630 8.8e-10 67.8 85 45.9
CAN.G710.69 Capsicum annuum HOM05D002518 ORTHO05D002630 8.8e-10 67.8 50 80.0
SHI28186 Sapria himalayana HOM05D002518 ORTHO05D002630 8.8e-10 67.8 67 49.3
CAN.G1703.18 Capsicum annuum HOM05D002496 ORTHO05D002787 1.1e-09 67.4 85 55.3
Atru.chr12.601 Acer truncatum HOM05D002518 ORTHO05D002630 1.5e-09 67.0 67 58.2
CAN.G134.139 Capsicum annuum HOM05D002496 ORTHO05D002787 2.0e-09 66.6 50 76.0
CSS0011254 Camellia sinensis var. sinensis HOM05D002518 ORTHO05D002630 2.6e-09 66.2 85 44.7
CAN.G1353.26 Capsicum annuum HOM05D002518 ORTHO05D002630 2.6e-09 66.2 50 74.0
Oeu058329.1 Olea europaea HOM05D002518 ORTHO05D002630 2.6e-09 66.2 71 49.3
VMungo0720G1865 Vigna mungo HOM05D002518 ORTHO05D002630 2.6e-09 66.2 85 49.4
CAN.G1484.14 Capsicum annuum HOM05D002518 ORTHO05D002630 4.4e-09 65.5 102 50.0
CAN.G575.132 Capsicum annuum HOM05D002496 ORTHO05D002787 4.4e-09 65.5 50 78.0
Duzib114G0996 Durio zibethinus HOM05D002518 ORTHO05D002630 4.4e-09 65.5 75 50.7
MD07G1183400 Malus domestica HOM05D002518 ORTHO05D002630 4.4e-09 65.5 85 48.2
Ciclev10030639m.g Citrus clementina HOM05D002518 ORTHO05D002630 5.7e-09 65.1 67 53.7
Glyma.10G292800 Glycine max HOM05D002518 ORTHO05D002630 5.7e-09 65.1 82 51.2
Glyma.20G243000 Glycine max HOM05D002518 ORTHO05D002630 1.7e-08 63.5 82 50.0
CAN.G5118.1 Capsicum annuum HOM05D002518 ORTHO05D002630 2.2e-08 63.2 62 66.1
Lalb_Chr02g0143821 Lupinus albus HOM05D002518 ORTHO05D002630 2.2e-08 63.2 85 49.4
Sabra10G0165700 Salix brachista HOM05D002518 ORTHO05D002630 2.2e-08 63.2 85 43.5
Eucgr.G02780 Eucalyptus grandis HOM05D002518 ORTHO05D002630 2.8e-08 62.8 67 49.3
Potri.010G214300 Populus trichocarpa HOM05D002518 ORTHO05D002630 4.8e-08 62.0 85 43.5
TPR.G10394 Trifolium pratense HOM05D002518 ORTHO05D002630 4.8e-08 62.0 67 50.7
Migut.F01537 Erythranthe guttata HOM05D002518 ORTHO05D002630 6.3e-08 61.6 71 52.1
Manes.10G039900 Manihot esculenta HOM05D002518 ORTHO05D002630 6.3e-08 61.6 67 46.3
Phvul.007G007200 Phaseolus vulgaris HOM05D002518 ORTHO05D002630 6.3e-08 61.6 85 45.9
ATR0307G086 Amborella trichopoda HOM05D002518 ORTHO05D002630 8.2e-08 61.2 72 47.2
arahy.Tifrunner.gnm1.ann1.7RD402 Arachis hypogaea HOM05D002518 ORTHO05D002630 1.1e-07 60.8 67 49.3
Ca_11341_v3 Cicer arietinum L. HOM05D002518 ORTHO05D002630 1.1e-07 60.8 67 52.2
Ca_30327_v3 Cicer arietinum L. HOM05D002518 ORTHO05D002630 1.1e-07 60.8 67 52.2
DCAR_031727 Daucus carota HOM05D002518 ORTHO05D002630 1.1e-07 60.8 68 51.5
Potri.008G047200 Populus trichocarpa HOM05D002518 ORTHO05D002630 1.1e-07 60.8 85 42.4
Duzib128G0274 Durio zibethinus HOM05D002518 ORTHO05D002630 1.4e-07 60.5 85 43.5
Gohir.D10G216901 Gossypium hirsutum HOM05D002518 ORTHO05D002630 1.4e-07 60.5 68 48.5
Medtr1g116070 Medicago truncatula HOM05D002518 ORTHO05D002630 1.4e-07 60.5 85 45.9
Psat6g239640 Pisum sativum HOM05D002518 ORTHO05D002630 1.8e-07 60.1 85 45.9
unitig_26.g10021 Utricularia gibba HOM05D002518 ORTHO05D002630 1.8e-07 60.1 114 39.5
QL08p057433 Quercus lobata HOM05D002518 ORTHO05D002630 2.4e-07 59.7 85 44.7
Sabra08G0033400 Salix brachista HOM05D002518 ORTHO05D002630 2.4e-07 59.7 85 42.4
Thecc.10G063600 Theobroma cacao HOM05D002518 ORTHO05D002630 2.4e-07 59.7 75 48.0
MELO3C025489.2 Cucumis melo HOM05D002518 ORTHO05D002630 3.1e-07 59.3 64 50.0
arahy.Tifrunner.gnm1.ann1.YI1C88 Arachis hypogaea HOM05D002518 ORTHO05D002630 4.1e-07 58.9 67 49.3
DCAR_015261 Daucus carota HOM05D002518 ORTHO05D002630 4.1e-07 58.9 69 47.8
Gorai.011G242500 Gossypium raimondii HOM05D002518 ORTHO05D002630 4.1e-07 58.9 68 47.1
TWI63G1198 Tripterygium wilfordii HOM05D002518 ORTHO05D002630 4.1e-07 58.9 85 47.1
Lj5g0003286 Lotus japonicus HOM05D002518 ORTHO05D002630 5.3e-07 58.5 67 49.3
SalBow6G2073 Salvia bowleyana HOM05D002518 ORTHO05D002630 5.3e-07 58.5 71 43.7
Lalb_Chr06g0164081 Lupinus albus HOM05D002518 ORTHO05D002630 7.0e-07 58.2 85 45.9
Gohir.A10G208600 Gossypium hirsutum HOM05D002518 ORTHO05D002630 9.1e-07 57.8 68 45.6
PSO421G0235 Papaver somniferum HOM05D002518 ORTHO05D002630 1.2e-06 57.4 72 47.2
PSO063G5989 Papaver somniferum HOM05D002518 ORTHO05D002630 1.6e-06 57.0 72 47.2
SGA_v2.0_scaffold8G04439 Striga asiatica HOM05D002518 ORTHO05D002630 2.0e-06 56.6 71 46.5
ClCG09G020340 Citrullus lanatus HOM05D002518 ORTHO05D002630 2.6e-06 56.2 64 46.9
COL.COLO4_06777 Corchorus olitorius HOM05D002518 ORTHO05D002630 2.6e-06 56.2 71 45.1
CsaV3_5G026090 Cucumis sativus L. HOM05D002518 ORTHO05D002630 2.6e-06 56.2 64 50.0
Nn2g14619 Nelumbo nucifera HOM05D002518 ORTHO05D002630 3.5e-06 55.8 68 50.0
Aa31LG10G10080 Aethionema arabicum HOM05D002518 ORTHO05D002630 4.5e-06 55.5 73 45.2
Cpa.g.sc10.59 Carica papaya HOM05D002518 ORTHO05D002630 4.5e-06 55.5 59 49.2
PSO017G1865 Papaver somniferum HOM05D002518 ORTHO05D002630 5.9e-06 55.1 72 45.8
Aa31LG5G20280 Aethionema arabicum HOM05D002518 ORTHO05D002630 7.7e-06 54.7 73 42.5
PSO063G6194 Papaver somniferum HOM05D002518 ORTHO05D002630 7.7e-06 54.7 72 45.8
PGR142G2021 Punica granatum HOM05D002518 ORTHO05D002630 7.7e-06 54.7 67 43.3


User provided reference genes

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