Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G598.13 Capsicum annuum HOM05D003640 ORTHO05D004439 2.2e-117 425.6 217 100.0
CAN.G358.147 Capsicum annuum HOM05D003640 ORTHO05D004439 5.4e-55 218.4 197 63.5
CAN.G732.35 Capsicum annuum HOM05D003640 ORTHO05D004439 1.6e-51 206.8 149 75.8
CAN.G1387.1 Capsicum annuum HOM05D003640 ORTHO05D004439 5.3e-50 201.8 175 65.1
Sopen03g022220 Solanum pennellii HOM05D003640 ORTHO05D004439 2.7e-46 189.5 198 60.1
Solyc03g082490.4 Solanum lycopersicum HOM05D003640 ORTHO05D004439 8.7e-45 184.5 195 60.0
Nitab4.5_0001993g0040 Nicotiana tabacum HOM05D003640 ORTHO05D004439 4.2e-39 165.6 203 53.2
CAN.G300.4 Capsicum annuum HOM05D000541 ORTHO05D000137 4.6e-30 135.6 84 84.5
CAN.G578.12 Capsicum annuum HOM05D001816 ORTHO05D004439 6.0e-30 135.2 91 76.9
Cc02_g00960 Coffea canephora HOM05D003640 ORTHO05D004439 2.2e-24 116.7 197 41.1
CAN.G1307.1 Capsicum annuum HOM05D001472 ORTHO05D004439 4.2e-23 112.5 73 80.8
Lj1C1026T8 Lonicera japonica HOM05D003640 ORTHO05D004439 9.3e-23 111.3 196 40.3
CAN.G125.22 Capsicum annuum HOM05D001472 ORTHO05D004439 3.7e-19 99.4 79 69.6
Dinv29226 Davidia involucrata HOM05D003640 ORTHO05D004439 3.1e-18 96.3 197 38.1
CSS0041088 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 6.9e-18 95.1 196 37.2
Actinidia08687 Actinidia chinensis HOM05D003640 ORTHO05D004439 1.2e-17 94.4 196 37.2
Dinv35374 Davidia involucrata HOM05D003640 ORTHO05D004439 2.6e-17 93.2 196 38.3
vmacro06427 Vaccinium macrocarpon HOM05D003640 ORTHO05D004439 2.6e-17 93.2 201 37.3
Actinidia34257 Actinidia chinensis HOM05D003640 ORTHO05D004439 1.0e-16 91.3 196 35.2
CSS0045837 Camellia sinensis var. sinensis HOM05D003640 ORTHO05D004439 1.3e-16 90.9 196 36.2
Oeu055180.3 Olea europaea HOM05D003640 ORTHO05D004439 1.3e-16 90.9 197 36.5
GSVIVG01038625001 Vitis vinifera HOM05D003640 ORTHO05D004439 2.2e-16 90.1 195 36.9
Rhsim03G0214000 Rhododendron simsii HOM05D003640 ORTHO05D004439 3.8e-16 89.4 192 35.4
Actinidia28276 Actinidia chinensis HOM05D003640 ORTHO05D004439 2.5e-15 86.7 196 34.7
Oeu061023.1 Olea europaea HOM05D003640 ORTHO05D004439 1.6e-14 84.0 198 34.3
Oeu037965.1 Olea europaea HOM05D003640 ORTHO05D004439 3.6e-14 82.8 200 35.5
QL09p007408 Quercus lobata HOM05D003640 ORTHO05D004439 3.6e-14 82.8 197 34.5
QL93p0214_0013 Quercus lobata HOM05D003640 ORTHO05D004439 3.6e-14 82.8 197 34.5
CAN.G358.52 Capsicum annuum HOM05D003640 ORTHO05D004439 7.9e-14 81.6 48 79.2
Nn3g18833 Nelumbo nucifera HOM05D003640 ORTHO05D004439 1.8e-13 80.5 197 33.5
Prupe.2G317300 Prunus persica HOM05D003640 ORTHO05D004439 5.1e-13 79.0 198 34.8
Dinv06471 Davidia involucrata HOM05D003640 ORTHO05D004439 1.5e-12 77.4 106 47.2
Glyma.06G134300 Glycine max HOM05D003640 ORTHO05D004439 3.3e-12 76.3 195 35.4
FvH4_7g32660 Fragaria vesca HOM05D003640 ORTHO05D004439 4.4e-12 75.9 198 33.3
FAN01G0295 Fragaria x ananassa HOM05D003640 ORTHO05D004439 4.4e-12 75.9 198 33.3
TAR375G0550 Trochodendron aralioides HOM05D003640 ORTHO05D004439 4.4e-12 75.9 199 31.7
CiPaw.06G042300 Carya illinoinensis HOM05D003640 ORTHO05D004439 5.7e-12 75.5 196 33.2
Thecc.03G206700 Theobroma cacao HOM05D003640 ORTHO05D004439 1.7e-11 73.9 194 33.0
FAN10G0822 Fragaria x ananassa HOM05D003640 ORTHO05D004439 2.2e-11 73.6 198 32.3
Lj1g0027227 Lotus japonicus HOM05D003640 ORTHO05D004439 2.2e-11 73.6 195 32.3
FAN03G1455 Fragaria x ananassa HOM05D003640 ORTHO05D004439 2.8e-11 73.2 198 32.8
Glyma.04G230800 Glycine max HOM05D003640 ORTHO05D004439 6.3e-11 72.0 192 34.4
CiPaw.05G202900 Carya illinoinensis HOM05D003640 ORTHO05D004439 1.1e-10 71.2 196 33.7
Ca_16756_v3 Cicer arietinum L. HOM05D003640 ORTHO05D004439 1.1e-10 71.2 191 34.6
COL.COLO4_14351 Corchorus olitorius HOM05D003640 ORTHO05D004439 1.1e-10 71.2 196 33.7
HanXRQChr15g0485391 Helianthus annuus HOM05D003640 ORTHO05D004439 1.1e-10 71.2 193 32.6
Phvul.009G050200 Phaseolus vulgaris HOM05D003640 ORTHO05D004439 1.1e-10 71.2 193 34.2
MD01G1227300 Malus domestica HOM05D003640 ORTHO05D004439 1.4e-10 70.9 197 32.5
FAN10G2795 Fragaria x ananassa HOM05D003640 ORTHO05D004439 3.1e-10 69.7 198 31.8
Hma1.2p1_0094F.1_g047240 Hydrangea macrophylla HOM05D003640 ORTHO05D004439 3.1e-10 69.7 222 32.9
SGA_v2.0_scaffold136G35055 Striga asiatica HOM05D003640 ORTHO05D004439 3.1e-10 69.7 193 31.1
MD07G1297600 Malus domestica HOM05D003640 ORTHO05D004439 5.3e-10 68.9 193 34.2
Hund09700 Selenicereus undatus HOM05D003640 ORTHO05D004439 5.3e-10 68.9 197 31.0
TAR636G3562 Trochodendron aralioides HOM05D003640 ORTHO05D004439 5.3e-10 68.9 195 29.7
VMungo1309G3003 Vigna mungo HOM05D003640 ORTHO05D004439 5.3e-10 68.9 196 33.7
Atru.chr12.2367 Acer truncatum HOM05D003640 ORTHO05D004439 9.1e-10 68.2 197 32.0
Haze_00277 Corylus avellana HOM05D003640 ORTHO05D004439 1.5e-09 67.4 191 33.0
Sabra12G0010700 Salix brachista HOM05D003640 ORTHO05D004439 1.5e-09 67.4 196 31.6
TAR629G0154 Trochodendron aralioides HOM05D003640 ORTHO05D004439 2.0e-09 67.0 197 31.5
Nn1g00405 Nelumbo nucifera HOM05D003640 ORTHO05D004439 4.5e-09 65.9 201 32.8
Sed0000635 Sechium edule HOM05D003640 ORTHO05D004439 4.5e-09 65.9 202 32.7
TWI39G1295 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 4.5e-09 65.9 190 31.6
arahy.Tifrunner.gnm1.ann1.BT3HV7 Arachis hypogaea HOM05D003640 ORTHO05D004439 5.9e-09 65.5 198 31.3
Cpa.g.sc3.144 Carica papaya HOM05D003640 ORTHO05D004439 7.7e-09 65.1 195 30.8
Migut.F00997 Erythranthe guttata HOM05D003640 ORTHO05D004439 7.7e-09 65.1 183 32.8
HanXRQChr05g0139301 Helianthus annuus HOM05D003640 ORTHO05D004439 1.0e-08 64.7 181 29.3
Potri.012G023200 Populus trichocarpa HOM05D003640 ORTHO05D004439 1.0e-08 64.7 191 31.4
Psat0s2807g0080 Pisum sativum HOM05D003640 ORTHO05D004439 1.3e-08 64.3 195 33.8
CANSAT21G0645 Cannabis sativa HOM05D003640 ORTHO05D004439 1.7e-08 63.9 196 33.2
TWI23G0563 Tripterygium wilfordii HOM05D003640 ORTHO05D004439 2.9e-08 63.2 191 31.9
arahy.Tifrunner.gnm1.ann1.1EDB5Y Arachis hypogaea HOM05D003640 ORTHO05D004439 3.8e-08 62.8 198 30.3
ECA232G0587 Erigeron canadensis HOM05D003640 ORTHO05D004439 3.8e-08 62.8 194 30.4
PSO135G0929 Papaver somniferum HOM05D003640 ORTHO05D004439 3.8e-08 62.8 195 33.8
RcHm_v2.0_Chr1g0382521 Rosa chinensis HOM05D003640 ORTHO05D004439 3.8e-08 62.8 198 31.8
Potri.015G006700 Populus trichocarpa HOM05D003640 ORTHO05D004439 8.5e-08 61.6 189 31.2
Manes.01G041300 Manihot esculenta HOM05D003640 ORTHO05D004439 1.1e-07 61.2 193 32.1
PSO384G0385 Papaver somniferum HOM05D003640 ORTHO05D004439 1.4e-07 60.8 194 34.0
RcHm_v2.0_Chr1g0382561 Rosa chinensis HOM05D003640 ORTHO05D004439 3.2e-07 59.7 200 30.5
Gorai.004G124100 Gossypium raimondii HOM05D003640 ORTHO05D004439 5.5e-07 58.9 195 32.8
Lalb_Chr11g0067271 Lupinus albus HOM05D003640 ORTHO05D004439 7.2e-07 58.5 180 28.3
SalBow6G0961 Salvia bowleyana HOM05D003640 ORTHO05D004439 7.2e-07 58.5 195 31.3
Sed0021595 Sechium edule HOM05D003640 ORTHO05D004439 7.2e-07 58.5 188 33.0
SGA_v2.0_scaffold565G52945 Striga asiatica HOM05D003640 ORTHO05D004439 7.2e-07 58.5 192 29.2
AUR62035604 Chenopodium quinoa HOM05D003640 ORTHO05D004439 9.4e-07 58.2 200 31.0
Duzib205G1657 Durio zibethinus HOM05D003640 ORTHO05D004439 9.4e-07 58.2 115 42.6
Medtr3g092250 Medicago truncatula HOM05D003640 ORTHO05D004439 9.4e-07 58.2 194 33.5
Duzib084G0116 Durio zibethinus HOM05D003640 ORTHO05D004439 1.6e-06 57.4 115 39.1
Gohir.D08G115200 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.6e-06 57.4 195 32.8
Gohir.D09G181300 Gossypium hirsutum HOM05D003640 ORTHO05D004439 1.6e-06 57.4 96 41.7
Gorai.006G203300 Gossypium raimondii HOM05D003640 ORTHO05D004439 1.6e-06 57.4 96 41.7
Lalb_Chr08g0239801 Lupinus albus HOM05D003640 ORTHO05D004439 2.1e-06 57.0 187 28.3
Ah.07g204850 Amaranthus hybridus HOM05D003640 ORTHO05D004439 2.7e-06 56.6 196 30.6
BcaB01g04251 Brassica carinata HOM05D003640 ORTHO05D004439 2.7e-06 56.6 157 31.2
Gohir.A12G247000 Gossypium hirsutum HOM05D003640 ORTHO05D004439 2.7e-06 56.6 111 39.6
Hund21040 Selenicereus undatus HOM05D003640 ORTHO05D004439 2.7e-06 56.6 197 28.4
MSTRG.8618 Avicennia marina HOM05D003640 ORTHO05D004439 3.6e-06 56.2 195 30.8
EL10Ac3g05201 Beta vulgaris HOM05D003640 ORTHO05D004439 3.6e-06 56.2 200 31.0
Gohir.A08G103800 Gossypium hirsutum HOM05D003640 ORTHO05D004439 3.6e-06 56.2 200 32.5
Gohir.D12G247700 Gossypium hirsutum HOM05D003640 ORTHO05D004439 3.6e-06 56.2 111 39.6
Gorai.008G265800 Gossypium raimondii HOM05D003640 ORTHO05D004439 3.6e-06 56.2 111 39.6
Sp6g15760 Schrenkiella parvula HOM05D003640 ORTHO05D004439 3.6e-06 56.2 156 29.5
unitig_92.g28243 Utricularia gibba HOM05D003640 ORTHO05D004439 3.6e-06 56.2 184 30.4
MSTRG.8540 Avicennia marina HOM05D003640 ORTHO05D004439 4.7e-06 55.8 190 31.1
unitig_37.g11993 Utricularia gibba HOM05D003640 ORTHO05D004439 4.7e-06 55.8 167 32.3
AUR62006022 Chenopodium quinoa HOM05D003640 ORTHO05D004439 6.1e-06 55.5 198 29.3
C03p17530 Brassica napus HOM05D003640 ORTHO05D004439 7.9e-06 55.1 160 31.2
BolC3t14166H Brassica oleracea HOM05D003640 ORTHO05D004439 7.9e-06 55.1 160 31.2
Sp6g15750 Schrenkiella parvula HOM05D003640 ORTHO05D004439 7.9e-06 55.1 165 30.3


User provided reference genes

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