Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G595.3 Capsicum annuum HOM05D003803 ORTHO05D004456 1.6e-109 399.4 204 100.0
Solyc07g041980.3 Solanum lycopersicum HOM05D003803 ORTHO05D004456 3.3e-54 215.7 129 79.8
SalBow5G3024 Salvia bowleyana HOM05D003803 ORTHO05D004456 1.1e-46 190.7 217 55.8
SalBow5G4531 Salvia bowleyana HOM05D003803 ORTHO05D004456 1.1e-46 190.7 217 55.8
TAR624G1266 Trochodendron aralioides HOM05D003803 ORTHO05D004456 6.9e-44 181.4 198 56.1
Oeu007415.1 Olea europaea HOM05D003803 ORTHO05D004456 4.5e-43 178.7 206 52.4
Potri.006G141100 Populus trichocarpa HOM05D003803 ORTHO05D004456 5.9e-43 178.3 125 68.8
Dinv42400 Davidia involucrata HOM05D003803 ORTHO05D004456 2.9e-42 176.0 120 70.0
Cc06_g12240 Coffea canephora HOM05D003803 ORTHO05D004456 1.4e-41 173.7 217 57.1
Duzib168G2099 Durio zibethinus HOM05D003803 ORTHO05D004456 4.2e-41 172.2 126 67.5
Manes.16G094800 Manihot esculenta HOM05D003803 ORTHO05D004456 1.6e-40 170.2 162 60.5
Nn8g38618 Nelumbo nucifera HOM05D003803 ORTHO05D004456 3.6e-40 169.1 121 70.2
Nitab4.5_0000343g0290 Nicotiana tabacum HOM05D003803 ORTHO05D004456 3.6e-40 169.1 105 80.0
Thecc.09G075700 Theobroma cacao HOM05D003803 ORTHO05D004456 1.8e-39 166.8 127 66.9
Gohir.A13G190300 Gossypium hirsutum HOM05D003803 ORTHO05D004456 6.7e-39 164.9 108 70.4
Gohir.D13G196350 Gossypium hirsutum HOM05D003803 ORTHO05D004456 6.7e-39 164.9 108 70.4
MD02G1093600 Malus domestica HOM05D003803 ORTHO05D004456 6.7e-39 164.9 223 52.9
Ciclev10010564m.g Citrus clementina HOM05D003803 ORTHO05D004456 1.5e-38 163.7 134 63.4
Duzib187G1358 Durio zibethinus HOM05D003803 ORTHO05D004456 3.3e-38 162.5 123 67.5
Prupe.7G197000 Prunus persica HOM05D003803 ORTHO05D004456 4.3e-38 162.2 199 54.8
TWI34G0129 Tripterygium wilfordii HOM05D003803 ORTHO05D004456 4.3e-38 162.2 130 65.4
Lalb_Chr07g0181211 Lupinus albus HOM05D003803 ORTHO05D004456 7.4e-38 161.4 214 47.7
Gorai.013G223800 Gossypium raimondii HOM05D003803 ORTHO05D004456 1.6e-37 160.2 108 69.4
Hma1.2p1_0169F.1_g074460 Hydrangea macrophylla HOM05D003803 ORTHO05D004456 1.6e-37 160.2 203 55.2
Duzib150G1133 Durio zibethinus HOM05D003803 ORTHO05D004456 2.8e-37 159.5 120 63.3
Sopen07g021560 Solanum pennellii HOM05D003803 ORTHO05D004456 6.3e-37 158.3 91 84.6
Potri.018G062400 Populus trichocarpa HOM05D003803 ORTHO05D004456 1.4e-36 157.1 203 49.8
Manes.03G041000 Manihot esculenta HOM05D003803 ORTHO05D004456 1.8e-36 156.8 119 63.9
MD15G1218900 Malus domestica HOM05D003803 ORTHO05D004456 2.4e-36 156.4 222 49.1
Eucgr.C03259 Eucalyptus grandis HOM05D003803 ORTHO05D004456 3.1e-36 156.0 133 62.4
CANSAT56G4286 Cannabis sativa HOM05D003803 ORTHO05D004456 5.3e-36 155.2 113 65.5
Lalb_Chr13g0299401 Lupinus albus HOM05D003803 ORTHO05D004456 5.3e-36 155.2 129 58.9
TWI63G1012 Tripterygium wilfordii HOM05D003803 ORTHO05D004456 9.0e-36 154.5 104 70.2
Gorai.001G015700 Gossypium raimondii HOM05D003803 ORTHO05D004456 1.2e-35 154.1 216 50.0
MSTRG.26474 Avicennia marina HOM05D003803 ORTHO05D004456 2.6e-35 152.9 211 52.1
Migut.L01571 Erythranthe guttata HOM05D003803 ORTHO05D004456 2.6e-35 152.9 227 48.5
CiPaw.03G205300 Carya illinoinensis HOM05D003803 ORTHO05D004456 5.9e-35 151.8 119 63.9
ClCG03G015020 Citrullus lanatus HOM05D003803 ORTHO05D004456 2.2e-34 149.8 108 63.9
CiPaw.04G142500 Carya illinoinensis HOM05D003803 ORTHO05D004456 2.9e-34 149.4 200 48.0
RcHm_v2.0_Chr2g0095321 Rosa chinensis HOM05D003803 ORTHO05D004456 2.9e-34 149.4 124 63.7
FvH4_1g08850 Fragaria vesca HOM05D003803 ORTHO05D004456 5.0e-34 148.7 116 64.7
Oeu000278.1 Olea europaea HOM05D003803 ORTHO05D004456 6.5e-34 148.3 218 46.8
Sp6g23850 Schrenkiella parvula HOM05D003803 ORTHO05D004456 8.5e-34 147.9 135 58.5
Psat1g134600 Pisum sativum HOM05D003803 ORTHO05D004456 1.4e-33 147.1 195 48.2
Phvul.003G130200 Phaseolus vulgaris HOM05D003803 ORTHO05D004456 1.9e-33 146.7 198 49.0
PSO421G0234 Papaver somniferum HOM05D003803 ORTHO05D004456 2.5e-33 146.4 206 52.4
PGR044G0570 Punica granatum HOM05D003803 ORTHO05D004456 2.5e-33 146.4 218 49.5
Gohir.A07G015200 Gossypium hirsutum HOM05D003803 ORTHO05D004456 3.2e-33 146.0 205 51.2
Glyma.15G178100 Glycine max HOM05D003803 ORTHO05D004456 4.2e-33 145.6 213 47.4
Sabra06G0110200 Salix brachista HOM05D003803 ORTHO05D004456 4.2e-33 145.6 99 69.7
CARHR192170 Cardamine hirsuta HOM05D003803 ORTHO05D004456 5.5e-33 145.2 115 66.1
Glyma.17G048600 Glycine max HOM05D003803 ORTHO05D004456 7.2e-33 144.8 218 50.0
Nn6g35693 Nelumbo nucifera HOM05D003803 ORTHO05D004456 9.4e-33 144.4 185 49.2
MELO3C015527.2 Cucumis melo HOM05D003803 ORTHO05D004456 1.2e-32 144.1 216 48.6
Actinidia29937 Actinidia chinensis HOM05D003803 ORTHO05D004456 1.6e-32 143.7 141 56.0
Glyma.09G070100 Glycine max HOM05D003803 ORTHO05D004456 7.9e-32 141.4 200 50.0
A10p19380 Brassica napus HOM05D003803 ORTHO05D004456 1.8e-31 140.2 115 59.1
Lj4g0012858 Lotus japonicus HOM05D003803 ORTHO05D004456 2.3e-31 139.8 212 44.3
PSO104G0196 Papaver somniferum HOM05D003803 ORTHO05D004456 2.3e-31 139.8 206 51.0
CsaV3_2G001120 Cucumis sativus L. HOM05D003803 ORTHO05D004456 3.0e-31 139.4 199 51.3
THA.LOC104799616 Tarenaya hassleriana HOM05D003803 ORTHO05D004456 3.0e-31 139.4 146 54.1
Peaxi162Scf00348g00817 Petunia axillaris HOM05D003803 ORTHO05D004456 5.1e-31 138.7 84 83.3
Sed0004681 Sechium edule HOM05D003803 ORTHO05D004456 8.8e-31 137.9 200 43.0
Gohir.D06G076000 Gossypium hirsutum HOM05D003803 ORTHO05D004456 1.1e-30 137.5 123 59.3
Psat4g018440 Pisum sativum HOM05D003803 ORTHO05D004456 5.7e-30 135.2 86 72.1
VMungo1215G1786 Vigna mungo HOM05D003803 ORTHO05D004456 7.4e-30 134.8 92 68.5
A02p06390 Brassica napus HOM05D003803 ORTHO05D004456 1.3e-29 134.0 114 58.8
BraA02t05584Z Brassica rapa HOM05D003803 ORTHO05D004456 1.3e-29 134.0 114 58.8
BolC2t07055H Brassica oleracea HOM05D003803 ORTHO05D004456 1.7e-29 133.7 114 59.6
Gorai.010G088900 Gossypium raimondii HOM05D003803 ORTHO05D004456 2.8e-29 132.9 221 45.2
QL11p000998 Quercus lobata HOM05D003803 ORTHO05D004456 2.8e-29 132.9 91 70.3
Sc18g0002620 Simmondsia chinensis HOM05D003803 ORTHO05D004456 2.8e-29 132.9 208 48.1
BraA10t44015Z Brassica rapa HOM05D003803 ORTHO05D004456 3.7e-29 132.5 128 53.9
Carub.0006s1897 Capsella rubella HOM05D003803 ORTHO05D004456 3.7e-29 132.5 111 62.2
GSVIVG01015067001 Vitis vinifera HOM05D003803 ORTHO05D004456 3.7e-29 132.5 132 56.8
Lj6g0024210 Lotus japonicus HOM05D003803 ORTHO05D004456 4.8e-29 132.1 165 48.5
AL6G32180 Arabidopsis lyrata HOM05D003803 ORTHO05D004456 8.2e-29 131.3 111 61.3
TPR.G12599 Trifolium pratense HOM05D003803 ORTHO05D004456 1.4e-28 130.6 250 41.6
Glyma.13G110900 Glycine max HOM05D003803 ORTHO05D004456 1.8e-28 130.2 89 67.4
Gohir.D07G014900 Gossypium hirsutum HOM05D003803 ORTHO05D004456 1.8e-28 130.2 210 47.1
C03p11700 Brassica napus HOM05D003803 ORTHO05D004456 2.4e-28 129.8 115 60.9
BolC3t13641H Brassica oleracea HOM05D003803 ORTHO05D004456 2.4e-28 129.8 115 60.9
FAN28G2731 Fragaria x ananassa HOM05D003803 ORTHO05D004456 4.1e-28 129.0 85 71.8
FAN26G0190 Fragaria x ananassa HOM05D003803 ORTHO05D004456 9.1e-28 127.9 86 70.9
AT5G20635 Arabidopsis thaliana HOM05D003803 ORTHO05D004456 1.5e-27 127.1 111 61.3
MSTRG.10505 Avicennia marina HOM05D003803 ORTHO05D004456 1.5e-27 127.1 220 44.1
Gohir.A06G077000 Gossypium hirsutum HOM05D003803 ORTHO05D004456 2.0e-27 126.7 229 46.3
Thhalv10014548m.g Eutrema salsugineum HOM05D003803 ORTHO05D004456 3.4e-27 125.9 128 54.7
Actinidia30227 Actinidia chinensis HOM05D003803 ORTHO05D004456 5.9e-27 125.2 109 60.6
Lalb_Chr11g0074261 Lupinus albus HOM05D003803 ORTHO05D004456 1.3e-26 124.0 110 55.5
Medtr2g042200 Medicago truncatula HOM05D003803 ORTHO05D004456 1.7e-26 123.6 84 69.0
Dinv25550 Davidia involucrata HOM05D003803 ORTHO05D004456 3.8e-26 122.5 78 79.5
A03p10180 Brassica napus HOM05D003803 ORTHO05D004456 5.0e-26 122.1 137 52.6
BraA03t10328Z Brassica rapa HOM05D003803 ORTHO05D004456 5.0e-26 122.1 137 52.6
Zm00001eb314160 Zea mays HOM05D003803 ORTHO05D004456 8.5e-26 121.3 128 50.8
Cpa.g.sc28.25 Carica papaya HOM05D003803 ORTHO05D004456 2.5e-25 119.8 81 69.1
THA.LOC104810996 Tarenaya hassleriana HOM05D003803 ORTHO05D004456 2.5e-25 119.8 242 38.8
BcaB01g04775 Brassica carinata HOM05D003803 ORTHO05D004456 5.5e-25 118.6 89 66.3
TPR.G8075 Trifolium pratense HOM05D003803 ORTHO05D004456 9.4e-25 117.9 84 66.7
Sed0026577 Sechium edule HOM05D003803 ORTHO05D004456 2.7e-24 116.3 89 68.5
Manes.11G018700 Manihot esculenta HOM05D003803 ORTHO05D004456 1.4e-23 114.0 189 42.3
Hma1.2p1_0179F.1_g079480 Hydrangea macrophylla HOM05D003803 ORTHO05D004456 2.3e-23 113.2 198 39.4
C09p55600 Brassica napus HOM05D003803 ORTHO05D004456 3.9e-23 112.5 185 47.0
Zm00001eb100230 Zea mays HOM05D003803 ORTHO05D004456 3.9e-23 112.5 107 54.2
Sc15g0000470 Simmondsia chinensis HOM05D003803 ORTHO05D004456 5.2e-23 112.1 126 50.0
Atru.chr7.1717 Acer truncatum HOM05D003803 ORTHO05D004456 1.5e-22 110.5 63 82.5
Actinidia39653 Actinidia chinensis HOM05D003803 ORTHO05D004456 5.7e-22 108.6 83 66.3
arahy.Tifrunner.gnm1.ann1.TX00RK Arachis hypogaea HOM05D003803 ORTHO05D004456 3.7e-21 105.9 90 58.9
arahy.Tifrunner.gnm1.ann1.AJ3133 Arachis hypogaea HOM05D003803 ORTHO05D004456 8.2e-21 104.8 90 57.8
Aqoxy7G01029 Aquilegia oxysepala HOM05D003803 ORTHO05D004456 1.1e-20 104.4 69 73.9
Sed0024871 Sechium edule HOM05D003803 ORTHO05D004456 1.8e-20 103.6 210 41.4
BolC9t58422H Brassica oleracea HOM05D003803 ORTHO05D004456 2.4e-20 103.2 201 43.8
FAN23G2205 Fragaria x ananassa HOM05D003803 ORTHO05D004456 3.1e-20 102.8 65 73.8
MELO3C004657.2 Cucumis melo HOM05D003803 ORTHO05D004456 4.1e-20 102.4 64 73.4
DCAR_024755 Daucus carota HOM05D003803 ORTHO05D004456 4.1e-20 102.4 155 42.6
CDE05G2490 Ceratophyllum demersum HOM05D003803 ORTHO05D004456 4.5e-19 99.0 143 42.0
BcaB08g36515 Brassica carinata HOM05D003803 ORTHO05D004456 1.0e-18 97.8 63 71.4
FAN19G2912 Fragaria x ananassa HOM05D003803 ORTHO05D004456 2.2e-18 96.7 56 82.1
Hund26046 Selenicereus undatus HOM05D003803 ORTHO05D004456 3.8e-18 95.9 70 67.1
arahy.Tifrunner.gnm1.ann1.1Y26QK Arachis hypogaea HOM05D003803 ORTHO05D004456 5.0e-18 95.5 97 51.5
arahy.Tifrunner.gnm1.ann1.KPGD7J Arachis hypogaea HOM05D003803 ORTHO05D004456 5.0e-18 95.5 97 51.5
Lsat_1_v5_gn_4_94241 Lactuca sativa HOM05D003803 ORTHO05D004456 5.5e-17 92.0 175 37.1
SGA_v2.0_scaffold21G09503 Striga asiatica HOM05D003803 ORTHO05D004456 7.2e-17 91.7 96 57.3
Medtr8g021170 Medicago truncatula HOM05D003803 ORTHO05D004456 9.4e-17 91.3 163 40.5
Rhsim03G0227100 Rhododendron simsii HOM05D003803 ORTHO05D004456 1.2e-16 90.9 63 74.6
ATR0598G175 Amborella trichopoda HOM05D003803 ORTHO05D004456 2.1e-16 90.1 90 51.1
Os08g0456600 Oryza sativa ssp. japonica HOM05D003803 ORTHO05D004456 2.7e-16 89.7 138 39.9
CsaV3_1G041120 Cucumis sativus L. HOM05D003803 ORTHO05D004456 4.7e-16 89.0 99 49.5
HPP92_016238 Vanilla planifolia HOM05D003803 ORTHO05D004456 8.0e-16 88.2 82 54.9
HPP92_004363 Vanilla planifolia HOM05D003803 ORTHO05D004456 1.4e-15 87.4 209 40.2
HanXRQChr10g0319741 Helianthus annuus HOM05D003803 ORTHO05D004456 6.7e-15 85.1 216 41.2
PGSC0003DMG400027887 Solanum tuberosum HOM05D003803 ORTHO05D004456 6.7e-15 85.1 49 83.7
Os09g0441900 Oryza sativa ssp. japonica HOM05D003803 ORTHO05D004456 1.2e-14 84.3 91 49.5
Nitab4.5_0009541g0010 Nicotiana tabacum HOM05D003803 ORTHO05D004456 1.5e-14 84.0 55 80.0
ClCG11G001400 Citrullus lanatus HOM05D003803 ORTHO05D004456 3.3e-14 82.8 115 43.5
Ca_02184_v3 Cicer arietinum L. HOM05D003803 ORTHO05D004456 4.4e-14 82.4 87 49.4
RcHm_v2.0_Chr6g0246401 Rosa chinensis HOM05D003803 ORTHO05D004456 5.7e-14 82.0 87 50.6
Glyma.07G040200 Glycine max HOM05D003803 ORTHO05D004456 2.2e-13 80.1 104 46.2
COL.COLO4_18088 Corchorus olitorius HOM05D003803 ORTHO05D004456 2.8e-13 79.7 45 84.4
SEGI_34897 Sequoiadendron giganteum HOM05D003803 ORTHO05D004456 2.8e-13 79.7 70 54.3
Haze_26022 Corylus avellana HOM05D003803 ORTHO05D004456 4.8e-13 79.0 50 78.0
Zm00001eb019600 Zea mays HOM05D003803 ORTHO05D004456 4.8e-13 79.0 122 47.5
Atru.chr1.4007 Acer truncatum HOM05D003803 ORTHO05D004456 6.3e-13 78.6 67 59.7
TPR.G16739 Trifolium pratense HOM05D003803 ORTHO05D004456 8.2e-13 78.2 74 54.1
COL.COLO4_30738 Corchorus olitorius HOM05D003803 ORTHO05D004456 1.4e-12 77.4 66 56.1
SGA_v2.0_scaffold609G53181 Striga asiatica HOM05D003803 ORTHO05D004456 2.4e-12 76.6 61 68.9
vmacro06347 Vaccinium macrocarpon HOM05D003803 ORTHO05D004456 2.4e-12 76.6 54 74.1
Lalb_Chr04g0263591 Lupinus albus HOM05D003803 ORTHO05D004456 3.1e-12 76.3 181 35.9
Rhsim05G0007000 Rhododendron simsii HOM05D003803 ORTHO05D004456 9.1e-12 74.7 44 86.4
QL05p003994 Quercus lobata HOM05D003803 ORTHO05D004456 2.0e-11 73.6 71 49.3
FAN26G2608 Fragaria x ananassa HOM05D003803 ORTHO05D004456 3.5e-11 72.8 38 89.5
Ca_09305_v3 Cicer arietinum L. HOM05D003803 ORTHO05D004456 1.0e-10 71.2 42 78.6
Thecc.06G122400 Theobroma cacao HOM05D003803 ORTHO05D004456 1.0e-10 71.2 199 36.2
HanXRQChr12g0354391 Helianthus annuus HOM05D003803 ORTHO05D004456 1.3e-10 70.9 107 41.1
Os03g0407400 Oryza sativa ssp. japonica HOM05D003803 ORTHO05D004456 1.7e-10 70.5 126 39.7
unitig_85.g27251 Utricularia gibba HOM05D003803 ORTHO05D004456 1.7e-10 70.5 45 75.6
Psat4g168440 Pisum sativum HOM05D003803 ORTHO05D004456 2.9e-10 69.7 75 52.0
SEGI_33452 Sequoiadendron giganteum HOM05D003803 ORTHO05D004456 2.9e-10 69.7 80 45.0
TAR636G1611 Trochodendron aralioides HOM05D003803 ORTHO05D004456 2.9e-10 69.7 46 76.1
unitig_699.g19272 Utricularia gibba HOM05D003803 ORTHO05D004456 2.9e-10 69.7 39 84.6
HanXRQChr09g0276811 Helianthus annuus HOM05D003803 ORTHO05D004456 8.5e-10 68.2 77 46.8
BcaC03g13781 Brassica carinata HOM05D003803 ORTHO05D004456 1.5e-09 67.4 37 86.5
BcaB05g22827 Brassica carinata HOM05D003803 ORTHO05D004456 7.2e-09 65.1 44 72.7
ECA232G3825 Erigeron canadensis HOM05D003803 ORTHO05D004456 9.4e-09 64.7 200 34.5
Oeu060649.1 Olea europaea HOM05D003803 ORTHO05D004456 2.7e-08 63.2 48 68.8
CSS0005199 Camellia sinensis var. sinensis HOM05D003803 ORTHO05D004456 4.7e-08 62.4 68 52.9
Haze_16046 Corylus avellana HOM05D000015 ORTHO05D000249 6.1e-08 62.0 52 57.7
THA.LOC104808881 Tarenaya hassleriana HOM05D003803 ORTHO05D004456 3.0e-07 59.7 58 55.2
Hma1.2p1_0291F.1_g114940 Hydrangea macrophylla HOM05D003803 ORTHO05D004456 6.8e-07 58.5 37 75.7
MBI13_g43925_MAGBIO Magnolia biondii HOM05D003803 ORTHO05D004456 2.0e-06 57.0 62 48.4
Mapoly0073s0064 Marchantia polymorpha HOM05D002369 ORTHO05D002435 2.6e-06 56.6 111 34.2
Medtr4g125015 Medicago truncatula HOM05D003803 ORTHO05D004456 3.4e-06 56.2 27 92.6
AagrBONN_evm.TU.Sc2ySwM_362.2112 Anthoceros agrestis HOM05D002369 ORTHO05D002435 5.7e-06 55.5 82 36.6
ATR0626G331 Amborella trichopoda HOM05D002369 ORTHO05D002435 7.5e-06 55.1 72 43.1
ClCG05G004760 Citrullus lanatus HOM05D002369 ORTHO05D002435 9.8e-06 54.7 55 50.9
RcHm_v2.0_Chr6g0246681 Rosa chinensis HOM05D003803 ORTHO05D004456 9.8e-06 54.7 62 45.2


User provided reference genes

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