Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G593.3 Capsicum annuum HOM05D001966 ORTHO05D004271 2.4e-209 731.9 359 100.0
CAN.G1648.17 Capsicum annuum HOM05D001966 ORTHO05D007227 4.9e-61 239.2 125 93.6
CAN.G386.21 Capsicum annuum HOM05D001966 ORTHO05D010055 3.9e-42 176.4 87 95.4
Lsat_1_v5_gn_2_20521 Lactuca sativa HOM05D001966 ORTHO05D007227 1.9e-36 157.5 79 92.4
Lsat_1_v5_gn_3_110440 Lactuca sativa HOM05D001966 ORTHO05D007227 1.9e-36 157.5 79 92.4
Lsat_1_v5_gn_4_147680 Lactuca sativa HOM05D001966 ORTHO05D007227 1.9e-36 157.5 79 92.4
Lsat_1_v5_gn_5_181880 Lactuca sativa HOM05D001966 ORTHO05D007227 1.9e-36 157.5 79 92.4
Lsat_1_v5_gn_6_94301 Lactuca sativa HOM05D001966 ORTHO05D007227 1.9e-36 157.5 79 92.4
Lsat_1_v5_gn_9_39281 Lactuca sativa HOM05D001966 ORTHO05D007227 1.9e-36 157.5 79 92.4
Lsat_1_v5_gn_4_147860 Lactuca sativa HOM05D001966 ORTHO05D007227 4.2e-36 156.4 117 70.9
ECA247G0757 Erigeron canadensis HOM05D000006 ORTHO05D000001 5.5e-36 156.0 79 92.4
RhsimPtG0005300 Rhododendron simsii HOM05D001966 ORTHO05D007227 3.0e-34 150.2 74 94.6
ClCG02G009760 Citrullus lanatus HOM05D001966 ORTHO05D000002 8.7e-34 148.7 262 37.8
SalBow1G8704 Salvia bowleyana HOM05D001966 ORTHO05D007227 1.4e-31 141.4 67 95.5
unitig_91.g26520 Utricularia gibba HOM05D001966 ORTHO05D007227 4.1e-31 139.8 67 94.0
CDE02G0843 Ceratophyllum demersum HOM05D001966 ORTHO05D007227 2.6e-30 137.1 71 90.1
AL9U11930 Arabidopsis lyrata HOM05D001966 ORTHO05D007227 1.0e-29 135.2 69 91.3
EL10As10g23965 Beta vulgaris HOM05D001966 ORTHO05D007227 2.2e-29 134.0 82 82.9
C09p24670 Brassica napus HOM05D001966 ORTHO05D007227 4.2e-28 129.8 66 92.4
C09p39340 Brassica napus HOM05D001966 ORTHO05D007227 4.2e-28 129.8 66 92.4
Potri.011G074201 Populus trichocarpa HOM05D001966 ORTHO05D007227 7.2e-28 129.0 71 85.9
SHI27036 Sapria himalayana HOM05D001966 ORTHO05D010986 1.6e-27 127.9 133 56.4
Sc05g0004050 Simmondsia chinensis HOM05D001966 ORTHO05D007227 1.1e-25 121.7 174 44.8
SHI36539 Sapria himalayana HOM05D001966 ORTHO05D007227 4.1e-23 113.2 59 89.8
Sopen02g009090 Solanum pennellii HOM05D008037 ORTHO05D004271 2.0e-22 110.9 56 92.9
EL10As10g23963 Beta vulgaris HOM05D008037 ORTHO05D004271 3.4e-22 110.2 79 73.4
MBI08_g48225_MAGBIO Magnolia biondii HOM05D008037 ORTHO05D004271 4.5e-22 109.8 59 89.8
Nitab4.5_0006502g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 7.7e-22 109.0 60 86.7
Hund25912 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.7e-22 109.0 79 73.4
Hund27633 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.7e-22 109.0 79 73.4
Hund27757 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.7e-22 109.0 79 73.4
Hund27833 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.7e-22 109.0 79 73.4
Hund28332 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.7e-22 109.0 79 73.4
Hund28440 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.7e-22 109.0 79 73.4
Hund28538 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.7e-22 109.0 79 73.4
Hund28614 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.7e-22 109.0 79 73.4
Hund28956 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.7e-22 109.0 79 73.4
Hund28981 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.7e-22 109.0 79 73.4
Hund29028 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.7e-22 109.0 79 73.4
Hund29091 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.7e-22 109.0 79 73.4
Hund29181 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.7e-22 109.0 79 73.4
Hund29249 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.7e-22 109.0 79 73.4
Hund29256 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.7e-22 109.0 79 73.4
Hund29263 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.7e-22 109.0 79 73.4
Hund29290 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.7e-22 109.0 79 73.4
Hund29318 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.7e-22 109.0 79 73.4
Hund29436 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.7e-22 109.0 79 73.4
Hund29853 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.7e-22 109.0 79 73.4
Hund30002 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.7e-22 109.0 79 73.4
Hund30263 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.7e-22 109.0 79 73.4
Hund30448 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.7e-22 109.0 79 73.4
Hund30632 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.7e-22 109.0 79 73.4
Hund30993 Selenicereus undatus HOM05D008037 ORTHO05D004271 7.7e-22 109.0 79 73.4
Sc25g0002010 Simmondsia chinensis HOM05D001966 ORTHO05D007227 1.0e-21 108.6 68 80.9
Nitab4.5_0001727g0130 Nicotiana tabacum HOM05D008037 ORTHO05D004271 6.5e-21 105.9 59 86.4
arahy.Tifrunner.gnm1.ann1.20TFSQ Arachis hypogaea HOM05D008037 ORTHO05D004271 1.4e-20 104.8 59 86.4
arahy.Tifrunner.gnm1.ann1.P2FSG5 Arachis hypogaea HOM05D008037 ORTHO05D004271 1.4e-20 104.8 59 86.4
Sed0014217 Sechium edule HOM05D001966 ORTHO05D007227 4.2e-20 103.2 77 67.5
VMungo0647G0507 Vigna mungo HOM05D006032 ORTHO05D007227 7.9e-19 99.0 74 67.6
Medtr4g006040 Medicago truncatula HOM05D008037 ORTHO05D009823 1.0e-18 98.6 52 90.4
VMungo0464G1535 Vigna mungo HOM05D001966 ORTHO05D007227 3.0e-18 97.1 82 63.4
arahy.Tifrunner.gnm1.ann1.ZHN7AL Arachis hypogaea HOM05D001966 ORTHO05D007227 6.7e-18 95.9 143 44.8
arahy.Tifrunner.gnm1.ann1.WI2XKB Arachis hypogaea HOM05D001966 ORTHO05D007227 1.1e-17 95.1 286 31.1
SHI36397 Sapria himalayana HOM05D008037 ORTHO05D004271 1.5e-17 94.7 51 90.2
Zm00001eb441600 Zea mays HOM05D008037 ORTHO05D004271 5.7e-17 92.8 47 93.6
arahy.Tifrunner.gnm1.ann1.ASR258 Arachis hypogaea HOM05D008037 ORTHO05D004271 1.8e-15 87.8 48 89.6
HanXRQChr14g0462871 Helianthus annuus HOM05D005084 ORTHO05D006254 1.2e-14 85.1 49 83.7
Solyc00g500344.1 Solanum lycopersicum HOM05D008037 ORTHO05D004271 2.0e-14 84.3 51 82.4
COL.COLO4_00694 Corchorus olitorius HOM05D001966 ORTHO05D007227 5.0e-13 79.7 38 94.7
COL.COLO4_02908 Corchorus olitorius HOM05D001966 ORTHO05D007227 5.0e-13 79.7 38 94.7
VMungo1127G1224 Vigna mungo HOM05D001966 ORTHO05D007227 2.5e-12 77.4 65 61.5
Lalb_Chr17g0346961 Lupinus albus HOM05D008016 ORTHO05D010588 3.2e-12 77.0 80 53.8
Atru.chr9.267 Acer truncatum HOM05D001966 ORTHO05D007227 7.2e-12 75.9 43 83.7
EL10Ac6g13942 Beta vulgaris HOM05D008037 ORTHO05D004271 1.2e-11 75.1 61 67.2
arahy.Tifrunner.gnm1.ann1.Q8ISGW Arachis hypogaea HOM05D001966 ORTHO05D007227 3.6e-11 73.6 72 56.9
Nitab4.5_0005831g0030 Nicotiana tabacum HOM05D001090 ORTHO05D006167 3.6e-11 73.6 81 53.1
arahy.Tifrunner.gnm1.ann1.54SFA9 Arachis hypogaea HOM05D008037 ORTHO05D004271 2.3e-10 70.9 51 72.5
CAN.G1346.2 Capsicum annuum HOM05D001966 ORTHO05D010588 3.0e-10 70.5 40 87.5
arahy.Tifrunner.gnm1.ann1.WHCD0B Arachis hypogaea HOM05D001966 ORTHO05D007227 3.9e-10 70.1 83 45.8
BolSC45t60899H Brassica oleracea HOM05D008016 ORTHO05D004271 6.7e-10 69.3 48 79.2
SHI26755 Sapria himalayana HOM05D001966 ORTHO05D010986 1.1e-09 68.6 41 78.0
arahy.Tifrunner.gnm1.ann1.ZMH4QB Arachis hypogaea HOM05D001966 ORTHO05D010986 2.0e-09 67.8 66 54.5
Nitab4.5_0016007g0040 Nicotiana tabacum HOM05D001966 ORTHO05D010588 3.3e-09 67.0 31 96.8
Nitab4.5_0003101g0110 Nicotiana tabacum HOM05D008354 ORTHO05D010055 7.4e-09 65.9 37 83.8
arahy.Tifrunner.gnm1.ann1.8D90VP Arachis hypogaea HOM05D001966 ORTHO05D007227 1.7e-08 64.7 66 53.0
Gohir.A09G039165 Gossypium hirsutum HOM05D001966 ORTHO05D007227 1.7e-08 64.7 68 54.4
Gohir.1Z049782 Gossypium hirsutum HOM05D001966 ORTHO05D007227 3.7e-08 63.5 30 93.3
Gohir.A04G039285 Gossypium hirsutum HOM05D001966 ORTHO05D007227 3.7e-08 63.5 30 93.3
Gohir.A05G323732 Gossypium hirsutum HOM05D001966 ORTHO05D007227 3.7e-08 63.5 30 93.3
Gohir.A13G086695 Gossypium hirsutum HOM05D001966 ORTHO05D007227 4.8e-08 63.2 36 77.8
Lalb_Chr20g0115041 Lupinus albus HOM05D008016 ORTHO05D004271 6.3e-08 62.8 29 96.6
Gorai.006G045900 Gossypium raimondii HOM05D001966 ORTHO05D007227 8.2e-08 62.4 88 40.9
arahy.Tifrunner.gnm1.ann1.VZYH4A Arachis hypogaea HOM05D008016 ORTHO05D010588 1.1e-07 62.0 63 52.4
Glyma.05G084525 Glycine max HOM05D001966 ORTHO05D007227 1.1e-07 62.0 47 68.1
BolSC49t61152H Brassica oleracea HOM05D001966 ORTHO05D007227 1.4e-07 61.6 35 82.9
CAN.G711.4 Capsicum annuum HOM05D001771 ORTHO05D001876 1.4e-07 61.6 62 58.1
Medtr0002s0250 Medicago truncatula HOM05D001966 ORTHO05D007227 1.8e-07 61.2 139 38.1
Nitab4.5_0001170g0070 Nicotiana tabacum HOM05D008037 ORTHO05D004271 1.8e-07 61.2 27 100.0
Sopen10g016570 Solanum pennellii HOM05D008037 ORTHO05D004271 1.8e-07 61.2 36 77.8
arahy.Tifrunner.gnm1.ann1.DY3820 Arachis hypogaea HOM05D000445 ORTHO05D010986 7.0e-07 59.3 27 96.3
arahy.Tifrunner.gnm1.ann1.MCF6CI Arachis hypogaea HOM05D001966 ORTHO05D010986 7.0e-07 59.3 27 96.3
Nitab4.5_0001727g0120 Nicotiana tabacum HOM05D008016 ORTHO05D010055 7.0e-07 59.3 30 93.3
Peaxi162Scf00080g00518 Petunia axillaris HOM05D001966 ORTHO05D007227 7.0e-07 59.3 30 90.0
Nitab4.5_0008665g0060 Nicotiana tabacum HOM05D008037 ORTHO05D004271 9.1e-07 58.9 55 60.0
Peaxi162Scf00687g00611 Petunia axillaris HOM05D001966 ORTHO05D010055 1.6e-06 58.2 29 93.1
SHI36395 Sapria himalayana HOM05D001966 ORTHO05D010986 3.5e-06 57.0 51 56.9
Nitab4.5_0003351g0090 Nicotiana tabacum HOM05D000325 ORTHO05D002025 4.5e-06 56.6 32 78.1
Peaxi162Scf00428g00114 Petunia axillaris HOM05D000680 ORTHO05D005619 5.9e-06 56.2 24 100.0
Gohir.D09G040060 Gossypium hirsutum HOM05D001966 ORTHO05D007227 7.7e-06 55.8 33 78.8


User provided reference genes

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