Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G59.17 Capsicum annuum HOM05D000500 ORTHO05D000367 2.5e-22 107.8 53 100.0
Nitab4.5_0000523g0090 Nicotiana tabacum HOM05D000500 ORTHO05D000367 5.6e-14 80.1 52 78.8
Peaxi162Scf00925g00323 Petunia axillaris HOM05D000500 ORTHO05D000367 5.6e-14 80.1 52 76.9
Peaxi162Scf00039g00163 Petunia axillaris HOM05D000500 ORTHO05D000367 9.6e-14 79.3 52 75.0
Nitab4.5_0000523g0080 Nicotiana tabacum HOM05D000500 ORTHO05D000367 2.1e-13 78.2 53 77.4
Peaxi162Scf00333g00033 Petunia axillaris HOM05D000500 ORTHO05D000367 4.0e-12 73.9 52 67.3
Peaxi162Scf00380g00619 Petunia axillaris HOM05D000500 ORTHO05D000367 4.0e-12 73.9 52 71.2
Peaxi162Scf00333g00411 Petunia axillaris HOM05D000500 ORTHO05D000367 9.0e-12 72.8 52 69.2
Solyc04g079370.4 Solanum lycopersicum HOM05D000500 ORTHO05D000367 9.9e-11 69.3 51 62.7
Sopen04g032980 Solanum pennellii HOM05D000500 ORTHO05D000367 1.3e-10 68.9 51 62.7
Sopen04g033090 Solanum pennellii HOM05D000500 ORTHO05D000367 2.9e-10 67.8 51 60.8
Peaxi162Scf01092g00125 Petunia axillaris HOM05D000500 ORTHO05D000367 4.9e-10 67.0 52 57.7
Nitab4.5_0008935g0040 Nicotiana tabacum HOM05D000500 ORTHO05D000367 8.4e-10 66.2 52 61.5
PGSC0003DMG400007996 Solanum tuberosum HOM05D000500 ORTHO05D000367 3.2e-09 64.3 51 58.8
Nitab4.5_0008515g0020 Nicotiana tabacum HOM05D000500 ORTHO05D000367 4.2e-09 63.9 52 57.7
PGSC0003DMG400011683 Solanum tuberosum HOM05D000500 ORTHO05D000367 9.3e-09 62.8 51 58.8
PGSC0003DMG400007995 Solanum tuberosum HOM05D000500 ORTHO05D000367 3.5e-08 60.8 51 56.9
Solyc04g150171.1 Solanum lycopersicum HOM05D000500 ORTHO05D000367 7.9e-08 59.7 48 60.4
AT2G25240 Arabidopsis thaliana HOM05D000500 ORTHO05D000367 1.0e-07 59.3 53 52.8
CAN.G371.53 Capsicum annuum HOM05D000500 ORTHO05D000367 2.3e-07 58.2 52 53.8
Nitab4.5_0008039g0020 Nicotiana tabacum HOM05D000500 ORTHO05D000367 3.0e-07 57.8 51 51.0
AL4G19030 Arabidopsis lyrata HOM05D000500 ORTHO05D000367 3.9e-07 57.4 54 57.4
CAN.G138.17 Capsicum annuum HOM05D000185 ORTHO05D000105 3.9e-07 57.4 51 51.0
TAR628G0361 Trochodendron aralioides HOM05D000500 ORTHO05D000367 3.9e-07 57.4 51 58.8
CAN.G371.56 Capsicum annuum HOM05D000500 ORTHO05D000367 5.1e-07 57.0 51 51.0
ECA232G2037 Erigeron canadensis HOM05D000500 ORTHO05D000367 5.1e-07 57.0 56 50.0
Nitab4.5_0000068g0390 Nicotiana tabacum HOM05D000500 ORTHO05D000367 5.1e-07 57.0 51 51.0
QL09p001681 Quercus lobata HOM05D000500 ORTHO05D000367 5.1e-07 57.0 54 50.0
QL09p001695 Quercus lobata HOM05D000500 ORTHO05D000367 5.1e-07 57.0 54 50.0
AL4G16500 Arabidopsis lyrata HOM05D000500 ORTHO05D000367 6.7e-07 56.6 53 50.9
CAN.G14.35 Capsicum annuum HOM05D000500 ORTHO05D000367 6.7e-07 56.6 50 48.0
Dinv01236 Davidia involucrata HOM05D000500 ORTHO05D000367 1.1e-06 55.8 53 54.7
BcaC07g39462 Brassica carinata HOM05D000500 ORTHO05D000367 1.5e-06 55.5 54 53.7
Aa31LG3G4020 Aethionema arabicum HOM05D000500 ORTHO05D000367 1.9e-06 55.1 56 58.9
AT2G26390 Arabidopsis thaliana HOM05D000500 ORTHO05D000367 1.9e-06 55.1 54 57.4
BolC8t50124H Brassica oleracea HOM05D000500 ORTHO05D000367 1.9e-06 55.1 54 53.7
PSO384G1388 Papaver somniferum HOM05D000500 ORTHO05D000367 1.9e-06 55.1 51 52.9
PSO384G1447 Papaver somniferum HOM05D000500 ORTHO05D000367 1.9e-06 55.1 53 54.7
A09p43110 Brassica napus HOM05D000500 ORTHO05D000367 2.5e-06 54.7 54 53.7
Carub.0004s0630 Capsella rubella HOM05D000500 ORTHO05D000367 2.5e-06 54.7 53 49.1
ECA232G1207 Erigeron canadensis HOM05D000500 ORTHO05D020575 2.5e-06 54.7 56 50.0
ECA232G2173 Erigeron canadensis HOM05D000500 ORTHO05D020575 2.5e-06 54.7 55 50.9
Sed0021725 Sechium edule HOM05D000500 ORTHO05D000367 2.5e-06 54.7 54 55.6
CARHR150380 Cardamine hirsuta HOM05D000500 ORTHO05D000367 3.3e-06 54.3 54 53.7
Aa31LG3G4470 Aethionema arabicum HOM05D000500 ORTHO05D000367 4.3e-06 53.9 56 53.6
BraA09t39779Z Brassica rapa HOM05D000500 ORTHO05D000367 4.3e-06 53.9 54 51.9
AUR62016489 Chenopodium quinoa HOM05D000500 ORTHO05D000367 4.3e-06 53.9 54 51.9
ECA232G2109 Erigeron canadensis HOM05D000500 ORTHO05D020575 4.3e-06 53.9 55 50.9
Peaxi162Scf00162g00034 Petunia axillaris HOM05D000500 ORTHO05D000367 4.3e-06 53.9 44 59.1
Aa31LG3G4450 Aethionema arabicum HOM05D000500 ORTHO05D000367 5.6e-06 53.5 56 53.6
Sp5g12130 Schrenkiella parvula HOM05D000500 ORTHO05D000367 5.6e-06 53.5 54 48.1
TAR628G0468 Trochodendron aralioides HOM05D000500 ORTHO05D000367 5.6e-06 53.5 51 54.9
TAR628G0506 Trochodendron aralioides HOM05D000500 ORTHO05D000367 5.6e-06 53.5 51 54.9
Aa31LG3G4000 Aethionema arabicum HOM05D000500 ORTHO05D000367 7.4e-06 53.1 53 49.1
Aa31LG3G4040 Aethionema arabicum HOM05D000500 ORTHO05D000367 7.4e-06 53.1 53 49.1
AT3G45220 Arabidopsis thaliana HOM05D000500 ORTHO05D000367 7.4e-06 53.1 60 50.0
Sp5g12140 Schrenkiella parvula HOM05D000500 ORTHO05D000367 9.6e-06 52.8 54 51.9


User provided reference genes

Program Settings