Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G588.74 Capsicum annuum HOM05D006199 ORTHO05D006558 6.4e-230 800.4 415 100.0
Sopen01g053590 Solanum pennellii HOM05D006199 ORTHO05D006558 3.3e-210 734.9 416 91.3
Solyc01g111550.3 Solanum lycopersicum HOM05D006199 ORTHO05D006558 1.4e-208 729.6 416 90.9
Nitab4.5_0005853g0010 Nicotiana tabacum HOM05D006199 ORTHO05D006558 8.4e-198 693.7 422 87.0
Nitab4.5_0006645g0060 Nicotiana tabacum HOM05D006199 ORTHO05D006558 2.0e-191 672.5 446 80.3
Peaxi162Scf00362g00651 Petunia axillaris HOM05D006199 ORTHO05D006558 2.7e-180 635.6 432 80.6
PGSC0003DMG400006190 Solanum tuberosum HOM05D006199 ORTHO05D006558 2.3e-179 632.5 416 80.5
Lj5A179T83 Lonicera japonica HOM05D006199 ORTHO05D006558 3.5e-143 512.3 416 65.9
Cfa005236 Carpinus fangiana HOM05D006199 ORTHO05D006558 3.6e-140 502.3 414 65.7
Dinv41943 Davidia involucrata HOM05D006199 ORTHO05D006558 1.0e-139 500.7 337 74.8
Cc02_g16220 Coffea canephora HOM05D006199 ORTHO05D006558 7.5e-138 494.6 343 74.6
MSTRG.19995 Avicennia marina HOM05D006199 ORTHO05D006558 2.2e-137 493.0 418 64.8
CiPaw.05G081500 Carya illinoinensis HOM05D006199 ORTHO05D006558 5.4e-136 488.4 413 63.7
CANSAT25G2535 Cannabis sativa HOM05D006199 ORTHO05D006558 2.7e-135 486.1 414 63.3
QL11p050170 Quercus lobata HOM05D006199 ORTHO05D006558 1.9e-133 479.9 421 61.8
Sabra09G0104300 Salix brachista HOM05D006199 ORTHO05D006558 1.9e-133 479.9 418 62.2
Potri.009G134500 Populus trichocarpa HOM05D006199 ORTHO05D006558 4.3e-133 478.8 417 63.3
TWI75G1548 Tripterygium wilfordii HOM05D006199 ORTHO05D006558 7.3e-133 478.0 414 63.3
GSVIVG01024030001 Vitis vinifera HOM05D006199 ORTHO05D006558 9.5e-133 477.6 334 73.4
Rhsim11G0191800 Rhododendron simsii HOM05D006199 ORTHO05D006558 4.7e-132 475.3 417 62.8
TAR628G1195 Trochodendron aralioides HOM05D006199 ORTHO05D006558 3.1e-131 472.6 414 63.0
RcHm_v2.0_Chr6g0251921 Rosa chinensis HOM05D006199 ORTHO05D006558 2.0e-127 459.9 415 61.7
FvH4_2g01260 Fragaria vesca HOM05D006199 ORTHO05D006558 3.5e-127 459.1 415 61.4
FAN20G1063 Fragaria x ananassa HOM05D006199 ORTHO05D006558 4.6e-127 458.8 414 60.9
PGR142G1980 Punica granatum HOM05D006199 ORTHO05D006558 2.3e-126 456.4 426 59.2
ClCG02G011890 Citrullus lanatus HOM05D006199 ORTHO05D006558 8.6e-126 454.5 414 58.2
Nn5g30772 Nelumbo nucifera HOM05D006199 ORTHO05D006558 5.6e-125 451.8 415 60.0
CsaV3_2G016060 Cucumis sativus L. HOM05D006199 ORTHO05D006558 9.5e-125 451.1 409 58.4
Phvul.009G119500 Phaseolus vulgaris HOM05D006199 ORTHO05D006558 1.2e-124 450.7 414 61.1
Sed0003263 Sechium edule HOM05D006199 ORTHO05D006558 1.2e-124 450.7 415 58.8
MD10G1095100 Malus domestica HOM05D006199 ORTHO05D006558 8.1e-124 448.0 412 60.2
VMungo1309G0102 Vigna mungo HOM05D006199 ORTHO05D006558 1.3e-121 440.7 418 59.6
Actinidia00620 Actinidia chinensis HOM05D006199 ORTHO05D006558 1.1e-120 437.6 408 61.0
EL10Ac9g21386 Beta vulgaris HOM05D006199 ORTHO05D006558 1.4e-120 437.2 413 56.7
Haze_02147 Corylus avellana HOM05D006199 ORTHO05D006558 4.1e-120 435.6 478 54.2
Gorai.002G197400 Gossypium raimondii HOM05D006199 ORTHO05D006558 1.6e-119 433.7 392 58.2
Duzib132G0247 Durio zibethinus HOM05D006199 ORTHO05D006558 2.7e-119 433.0 402 58.5
Aqoxy6G02177 Aquilegia oxysepala HOM05D006199 ORTHO05D006558 3.5e-119 432.6 415 57.1
Eucgr.I01413 Eucalyptus grandis HOM05D006199 ORTHO05D006558 3.5e-119 432.6 418 57.7
Thecc.02G060900 Theobroma cacao HOM05D006199 ORTHO05D006558 7.8e-119 431.4 392 58.7
SalBow1G2578 Salvia bowleyana HOM05D006199 ORTHO05D006558 1.3e-118 430.6 418 57.7
Gohir.A01G168100 Gossypium hirsutum HOM05D006199 ORTHO05D006558 3.9e-118 429.1 392 57.7
MBI08_g14630_MAGBIO Magnolia biondii HOM05D006199 ORTHO05D006558 3.9e-118 429.1 415 57.1
FAN24G2717 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.1e-117 427.6 386 60.4
Migut.B00085 Erythranthe guttata HOM05D006199 ORTHO05D006558 7.3e-117 424.9 417 58.3
FAN27G0272 Fragaria x ananassa HOM05D006199 ORTHO05D006558 7.3e-117 424.9 413 58.4
AT2G20980 Arabidopsis thaliana HOM05D006199 ORTHO05D006558 1.2e-116 424.1 409 54.8
Ah.01g022950 Amaranthus hybridus HOM05D006199 ORTHO05D006558 3.6e-116 422.5 417 55.2
AUR62013038 Chenopodium quinoa HOM05D006199 ORTHO05D006558 4.7e-116 422.2 418 55.7
MELO3C020815.2 Cucumis melo HOM05D006199 ORTHO05D006558 6.2e-116 421.8 458 52.4
Medtr3g117880 Medicago truncatula HOM05D006199 ORTHO05D006558 6.2e-116 421.8 419 58.7
Glyma.04G003800 Glycine max HOM05D006199 ORTHO05D006558 3.1e-115 419.5 416 58.4
Carub.0004s0005 Capsella rubella HOM05D006199 ORTHO05D006558 2.0e-114 416.8 341 60.4
Prupe.8G164900 Prunus persica HOM05D006199 ORTHO05D006558 2.0e-114 416.8 413 57.6
AL4G10110 Arabidopsis lyrata HOM05D006199 ORTHO05D006558 5.8e-114 415.2 343 60.6
Lj1g0009253 Lotus japonicus HOM05D006199 ORTHO05D006558 9.9e-114 414.5 425 57.4
Lsat_1_v5_gn_4_71580 Lactuca sativa HOM05D006199 ORTHO05D006558 1.4e-112 410.6 417 54.7
Oeu050364.1 Olea europaea HOM05D006199 ORTHO05D006558 1.9e-112 410.2 254 80.7
Ciclev10028644m.g Citrus clementina HOM05D006199 ORTHO05D006558 2.4e-112 409.8 416 56.7
Manes.04G075600 Manihot esculenta HOM05D006199 ORTHO05D006558 2.4e-112 409.8 366 59.8
Thhalv10000193m.g Eutrema salsugineum HOM05D006199 ORTHO05D006558 7.1e-112 408.3 413 55.2
arahy.Tifrunner.gnm1.ann1.H9ZTXG Arachis hypogaea HOM05D006199 ORTHO05D006558 2.7e-111 406.4 416 57.2
Gohir.D01G159100 Gossypium hirsutum HOM05D006199 ORTHO05D006558 2.7e-111 406.4 314 63.7
Sc18g0006460 Simmondsia chinensis HOM05D006199 ORTHO05D006558 6.6e-110 401.7 368 59.2
Sp4g00170 Schrenkiella parvula HOM05D006199 ORTHO05D006558 3.6e-108 396.0 414 53.4
ECA234G0878 Erigeron canadensis HOM05D006199 ORTHO05D006558 2.4e-107 393.3 414 55.1
PSO675G4200 Papaver somniferum HOM05D006199 ORTHO05D006558 2.4e-107 393.3 436 53.9
THA.LOC104807811 Tarenaya hassleriana HOM05D006199 ORTHO05D006558 3.1e-107 392.9 407 52.8
PSO541G4917 Papaver somniferum HOM05D006199 ORTHO05D006558 1.3e-105 387.5 433 53.1
Aa31LG7G15660 Aethionema arabicum HOM05D006199 ORTHO05D006558 2.2e-105 386.7 437 52.2
DCAR_022808 Daucus carota HOM05D006199 ORTHO05D006558 2.9e-105 386.3 414 54.6
Ca_15302_v3 Cicer arietinum L. HOM05D006199 ORTHO05D006558 4.9e-105 385.6 367 58.6
TPR.G38477 Trifolium pratense HOM05D006199 ORTHO05D006558 4.9e-105 385.6 417 55.6
A03p27410 Brassica napus HOM05D006199 ORTHO05D006558 3.2e-104 382.9 419 53.0
SHI05731 Sapria himalayana HOM05D006199 ORTHO05D006558 1.2e-103 380.9 340 59.1
BraA03t11952Z Brassica rapa HOM05D006199 ORTHO05D006558 6.0e-103 378.6 419 52.5
CiPaw.06G122500 Carya illinoinensis HOM05D006199 ORTHO05D006558 3.0e-102 376.3 335 61.2
HanXRQChr10g0300911 Helianthus annuus HOM05D006199 ORTHO05D006558 5.1e-102 375.6 416 52.6
C03p33040 Brassica napus HOM05D006199 ORTHO05D006558 8.7e-102 374.8 418 51.7
BcaC01g04861 Brassica carinata HOM05D006199 ORTHO05D006558 7.3e-101 371.7 414 51.9
BolC3t15631H Brassica oleracea HOM05D006199 ORTHO05D006558 7.3e-101 371.7 418 51.2
ATR0078G008 Amborella trichopoda HOM05D006199 ORTHO05D006558 2.9e-97 359.8 422 50.2
CARHR111860 Cardamine hirsuta HOM05D006199 ORTHO05D006558 2.9e-97 359.8 379 51.7
Atru.chr5.3311 Acer truncatum HOM05D006199 ORTHO05D006558 4.9e-97 359.0 367 54.2
COL.COLO4_17328 Corchorus olitorius HOM05D006199 ORTHO05D006558 4.9e-97 359.0 378 54.2
AUR62010046 Chenopodium quinoa HOM05D006199 ORTHO05D006558 3.2e-96 356.3 417 51.6
Hund00025 Selenicereus undatus HOM05D006199 ORTHO05D006558 1.0e-94 351.3 421 51.3
Os09g0539400 Oryza sativa ssp. japonica HOM05D006199 ORTHO05D006558 6.2e-92 342.0 430 47.4
HPP92_008341 Vanilla planifolia HOM05D006199 ORTHO05D006558 1.5e-90 337.4 412 50.0
arahy.Tifrunner.gnm1.ann1.WS10KT Arachis hypogaea HOM05D006199 ORTHO05D006558 1.7e-89 334.0 416 51.0
Lalb_Chr23g0265011 Lupinus albus HOM05D006199 ORTHO05D006558 1.6e-87 327.4 340 55.6
BcaB07g29803 Brassica carinata HOM05D006199 ORTHO05D006558 2.8e-84 316.6 432 45.4
Cpa.g.sc37.143 Carica papaya HOM05D006199 ORTHO05D006558 4.8e-84 315.8 242 64.9
vmacro02274 Vaccinium macrocarpon HOM05D006199 ORTHO05D006558 1.2e-79 301.2 336 51.2
Zm00001eb331950 Zea mays HOM05D006199 ORTHO05D006558 3.0e-78 296.6 313 49.2
Psat5g002720 Pisum sativum HOM05D006199 ORTHO05D006558 4.3e-77 292.7 417 47.7
CSS0017687 Camellia sinensis var. sinensis HOM05D006199 ORTHO05D006558 4.8e-76 289.3 191 73.8
FAN11G3400 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.3e-68 264.6 201 64.2
unitig_37.g12834 Utricularia gibba HOM05D006199 ORTHO05D006558 5.7e-61 239.2 313 46.0
FvH4_3g06660 Fragaria vesca HOM05D006199 ORTHO05D006558 9.1e-59 231.9 167 65.3
Pp3c15_24300 Physcomitrium patens HOM05D006199 ORTHO05D006558 6.7e-54 215.7 389 36.0
Mapoly0068s0001 Marchantia polymorpha HOM05D006199 ORTHO05D006558 7.4e-53 212.2 326 39.9
AagrBONN_evm.TU.Sc2ySwM_362.2501 Anthoceros agrestis HOM05D006199 ORTHO05D006558 8.2e-52 208.8 364 36.0
FvH4_1g02330 Fragaria vesca HOM05D006199 ORTHO05D006558 1.2e-42 178.3 111 75.7
FAN14G5753 Fragaria x ananassa HOM05D006199 ORTHO05D006558 2.9e-41 173.7 111 73.0
FAN12G0591 Fragaria x ananassa HOM05D006199 ORTHO05D006558 5.0e-41 172.9 145 62.1
FAN06G5031 Fragaria x ananassa HOM05D006199 ORTHO05D006558 1.8e-38 164.5 129 63.6
AUR62027127 Chenopodium quinoa HOM05D006199 ORTHO05D006558 1.7e-36 157.9 195 51.3
Actinidia20510 Actinidia chinensis HOM05D006199 ORTHO05D006558 4.8e-36 156.4 132 62.1
FvH4_5g37420 Fragaria vesca HOM05D006199 ORTHO05D006558 2.0e-34 151.0 133 60.9
CSS0031508 Camellia sinensis var. sinensis HOM05D006199 ORTHO05D006558 9.5e-32 142.1 177 49.7
FvH4_4g14930 Fragaria vesca HOM05D006199 ORTHO05D006558 5.2e-30 136.3 129 55.0
BcaB01g02961 Brassica carinata HOM05D006199 ORTHO05D006558 5.7e-29 132.9 193 41.5
MCO03G518 Micromonas commoda HOM05D006199 ORTHO05D006558 2.4e-27 127.5 198 35.9
SGA_v2.0_scaffold58G20372 Striga asiatica HOM05D006199 ORTHO05D006558 4.3e-24 116.7 167 48.5
FAN24G0607 Fragaria x ananassa HOM05D006199 ORTHO05D006558 6.8e-22 109.4 77 63.6
FvH4_2g23470 Fragaria vesca HOM05D006199 ORTHO05D006558 6.4e-20 102.8 61 75.4
FvH4_7g17270 Fragaria vesca HOM05D006199 ORTHO05D006558 6.4e-20 102.8 81 61.7
FAN14G4166 Fragaria x ananassa HOM05D006199 ORTHO05D006558 3.2e-19 100.5 61 73.8
RcHm_v2.0_Chr5g0048301 Rosa chinensis HOM05D006199 ORTHO05D006558 1.2e-18 98.6 219 31.5
FAN06G2201 Fragaria x ananassa HOM05D006199 ORTHO05D006558 3.0e-17 94.0 148 43.2
Cre07.g351400 Chlamydomonas reinhardtii HOM05D006199 ORTHO05D006558 1.1e-16 92.0 282 27.7
CBR_g870 Chara braunii HOM05D006199 ORTHO05D006558 1.1e-14 85.5 275 28.7
CDE02G3657 Ceratophyllum demersum HOM05D006199 ORTHO05D006558 3.4e-13 80.5 96 49.0
FvH4_4g05800 Fragaria vesca HOM05D006199 ORTHO05D006558 2.0e-10 71.2 54 63.0
HanXRQChr15g0479941 Helianthus annuus HOM05D006199 ORTHO05D006558 3.9e-09 67.0 79 46.8


User provided reference genes

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