Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G585.40 Capsicum annuum HOM05D009485 ORTHO05D006259 5.3e-101 371.7 297 100.0
Nitab4.5_0001675g0090 Nicotiana tabacum HOM05D009485 ORTHO05D006259 3.3e-55 219.5 294 68.4
Sopen07g029750 Solanum pennellii HOM05D009485 ORTHO05D006259 5.5e-50 202.2 294 66.0
Peaxi162Scf00111g00008 Petunia axillaris HOM05D009485 ORTHO05D006259 3.0e-48 196.4 290 52.8
Solyc07g056370.3 Solanum lycopersicum HOM05D009485 ORTHO05D006259 3.3e-47 193.0 294 68.0
Sopen10g003690 Solanum pennellii HOM05D009485 ORTHO05D006259 9.4e-42 174.9 295 41.7
Peaxi162Scf00035g00291 Petunia axillaris HOM05D009485 ORTHO05D006259 4.0e-40 169.5 294 42.9
Nitab4.5_0003934g0050 Nicotiana tabacum HOM05D009485 ORTHO05D006259 3.4e-39 166.4 295 60.0
Nitab4.5_0002027g0170 Nicotiana tabacum HOM05D009485 ORTHO05D006259 1.7e-35 154.1 294 44.2
Nitab4.5_0001402g0020 Nicotiana tabacum HOM05D009485 ORTHO05D006259 5.7e-31 139.0 158 57.0
PGSC0003DMG400021282 Solanum tuberosum HOM05D009485 ORTHO05D006259 1.8e-29 134.0 295 42.4
CAN.G1191.3 Capsicum annuum HOM05D009485 ORTHO05D006259 1.5e-26 124.4 294 49.7
CAN.G585.50 Capsicum annuum HOM05D009485 ORTHO05D006259 4.0e-24 116.3 68 89.7
Solyc10g007780.3 Solanum lycopersicum HOM05D009485 ORTHO05D006259 6.8e-24 115.5 234 40.6
MSTRG.6747 Avicennia marina HOM05D009485 ORTHO05D006259 1.1e-21 108.2 297 47.1
DCAR_013314 Daucus carota HOM05D006785 ORTHO05D006259 7.0e-21 105.5 160 43.1
Oeu036701.1 Olea europaea HOM05D006851 ORTHO05D008844 3.5e-20 103.2 297 38.7
Dinv07090 Davidia involucrata HOM05D006785 ORTHO05D006259 5.9e-20 102.4 168 41.7
Rhsim06G0116700 Rhododendron simsii HOM05D006785 ORTHO05D006259 1.7e-19 100.9 165 43.0
Cc05_g09420 Coffea canephora HOM05D009485 ORTHO05D006259 5.0e-19 99.4 159 44.0
Migut.M00503 Erythranthe guttata HOM05D009485 ORTHO05D006259 5.0e-19 99.4 158 43.7
Oeu020927.1 Olea europaea HOM05D009485 ORTHO05D006259 1.2e-17 94.7 301 46.2
Actinidia32516 Actinidia chinensis HOM05D006785 ORTHO05D006259 1.0e-16 91.7 152 42.1
Actinidia11204 Actinidia chinensis HOM05D006785 ORTHO05D006259 1.8e-16 90.9 167 37.7
ECA233G1175 Erigeron canadensis HOM05D009485 ORTHO05D006259 2.6e-15 87.0 158 36.1
HanXRQChr08g0227971 Helianthus annuus HOM05D009485 ORTHO05D006259 2.6e-15 87.0 160 38.8
vmacro12460 Vaccinium macrocarpon HOM05D006785 ORTHO05D006259 2.2e-14 84.0 170 41.8
CSS0028256 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 1.9e-13 80.9 162 44.4
CSS0047125 Camellia sinensis var. sinensis HOM05D006785 ORTHO05D006259 1.9e-13 80.9 162 44.4
unitig_747.g21610 Utricularia gibba HOM05D009485 ORTHO05D006259 4.1e-13 79.7 297 26.9
Duzib264G0099 Durio zibethinus HOM05D006785 ORTHO05D006259 6.0e-12 75.9 123 37.4
Thecc.01G161700 Theobroma cacao HOM05D006785 ORTHO05D006259 7.8e-12 75.5 123 39.0
Gorai.008G098200 Gossypium raimondii HOM05D006785 ORTHO05D006259 1.3e-11 74.7 123 39.8
Gohir.D12G068400 Gossypium hirsutum HOM05D006785 ORTHO05D006259 3.9e-11 73.2 123 39.0
Gohir.A12G079000 Gossypium hirsutum HOM05D006785 ORTHO05D006259 5.0e-11 72.8 123 38.2
Lsat_1_v5_gn_6_18081 Lactuca sativa HOM05D009485 ORTHO05D006259 5.0e-11 72.8 160 44.4
Sed0020726 Sechium edule HOM05D006785 ORTHO05D006259 1.6e-09 67.8 128 42.2
Gohir.D04G036800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 2.8e-09 67.0 89 43.8
Gohir.A05G378800 Gossypium hirsutum HOM05D006785 ORTHO05D006259 3.6e-09 66.6 89 43.8
unitig_46.g18281 Utricularia gibba HOM05D009485 ORTHO05D006259 3.6e-09 66.6 144 37.5
Gorai.012G041600 Gossypium raimondii HOM05D006785 ORTHO05D006259 4.7e-09 66.2 89 43.8
Nitab4.5_0005042g0030 Nicotiana tabacum HOM05D002505 ORTHO05D007115 4.7e-09 66.2 46 80.4
TAR627G0640 Trochodendron aralioides HOM05D006785 ORTHO05D006259 1.1e-08 65.1 172 34.3
MBI10_g42732_MAGBIO Magnolia biondii HOM05D006785 ORTHO05D006259 1.8e-08 64.3 133 40.6
PSO675G6378 Papaver somniferum HOM05D006785 ORTHO05D006259 1.8e-08 64.3 132 39.4
Hma1.2p1_0960F.1_g241635 Hydrangea macrophylla HOM05D006785 ORTHO05D006259 2.3e-08 63.9 158 30.4
PSO541G2000 Papaver somniferum HOM05D006785 ORTHO05D006259 4.0e-08 63.2 132 39.4
Eucgr.A01969 Eucalyptus grandis HOM05D006785 ORTHO05D006259 6.8e-08 62.4 130 36.2
PGR042G2728 Punica granatum HOM05D006785 ORTHO05D006259 6.8e-08 62.4 130 38.5
TWI59G0461 Tripterygium wilfordii HOM05D006785 ORTHO05D006259 1.5e-07 61.2 135 39.3
TAR629G3165 Trochodendron aralioides HOM05D006785 ORTHO05D006259 1.5e-07 61.2 135 37.0
Manes.01G127500 Manihot esculenta HOM05D006785 ORTHO05D006259 4.4e-07 59.7 163 33.7
Manes.02G084200 Manihot esculenta HOM05D006785 ORTHO05D006259 5.8e-07 59.3 163 36.2
Lj1P620T12 Lonicera japonica HOM05D006785 ORTHO05D006259 1.3e-06 58.2 82 40.2
FAN09G1973 Fragaria x ananassa HOM05D006785 ORTHO05D006259 3.7e-06 56.6 132 38.6
Cfa021376 Carpinus fangiana HOM05D006785 ORTHO05D006259 4.9e-06 56.2 135 36.3
Gohir.D11G228900 Gossypium hirsutum HOM05D006785 ORTHO05D006259 6.4e-06 55.8 119 31.1
THA.LOC104800823 Tarenaya hassleriana HOM05D006785 ORTHO05D006259 6.4e-06 55.8 126 37.3


User provided reference genes

Program Settings