Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G584.59 Capsicum annuum HOM05D000852 ORTHO05D000657 2.6e-62 241.9 124 100.0
CAN.G1618.1 Capsicum annuum HOM05D000852 ORTHO05D000657 3.0e-58 228.4 124 94.4
PGSC0003DMG400041852 Solanum tuberosum HOM05D000852 ORTHO05D000657 1.5e-46 189.5 126 75.4
Solyc07g006395.2 Solanum lycopersicum HOM05D000852 ORTHO05D000657 7.9e-43 177.2 121 72.7
Sopen07g002490 Solanum pennellii HOM05D000852 ORTHO05D000657 3.0e-42 175.3 121 71.9
Nitab4.5_0004847g0010 Nicotiana tabacum HOM05D000852 ORTHO05D000657 1.6e-19 99.8 128 52.3
Nitab4.5_0005404g0020 Nicotiana tabacum HOM05D000852 ORTHO05D000657 8.0e-19 97.4 107 56.1
Nitab4.5_0004017g0020 Nicotiana tabacum HOM05D000852 ORTHO05D000657 4.0e-18 95.1 129 51.2
Nitab4.5_0003765g0010 Nicotiana tabacum HOM05D000852 ORTHO05D000657 1.5e-17 93.2 130 53.8
Nitab4.5_0011660g0010 Nicotiana tabacum HOM05D000852 ORTHO05D000657 2.2e-16 89.4 130 52.3
Nitab4.5_0000505g0090 Nicotiana tabacum HOM05D000852 ORTHO05D000657 1.1e-15 87.0 130 50.8
PGSC0003DMG400011227 Solanum tuberosum HOM05D000852 ORTHO05D000657 1.4e-15 86.7 130 49.2
Nitab4.5_0000008g0520 Nicotiana tabacum HOM05D000852 ORTHO05D000657 2.4e-15 85.9 130 50.0
Solyc07g006390.3 Solanum lycopersicum HOM05D000852 ORTHO05D000657 4.1e-15 85.1 130 50.0
Sopen07g002480 Solanum pennellii HOM05D000852 ORTHO05D000657 5.4e-15 84.7 130 48.5
Nitab4.5_0000008g0550 Nicotiana tabacum HOM05D000852 ORTHO05D000657 9.1e-15 84.0 129 50.4
Nitab4.5_0000008g0540 Nicotiana tabacum HOM05D000852 ORTHO05D000657 2.0e-14 82.8 136 49.3
Peaxi162Scf00841g00039 Petunia axillaris HOM05D000852 ORTHO05D000657 1.0e-13 80.5 130 46.2
Nitab4.5_0004847g0070 Nicotiana tabacum HOM05D000852 ORTHO05D000657 3.6e-11 72.0 90 47.8
Peaxi162Scf00384g00036 Petunia axillaris HOM05D000852 ORTHO05D000657 8.0e-11 70.9 121 42.1
Actinidia07323 Actinidia chinensis HOM05D000852 ORTHO05D000657 5.2e-10 68.2 126 36.5
Nitab4.5_0004017g0040 Nicotiana tabacum HOM05D000852 ORTHO05D000657 6.8e-10 67.8 123 41.5
TWI34G1963 Tripterygium wilfordii HOM05D000852 ORTHO05D000657 6.8e-10 67.8 121 40.5
SalBow6G4877 Salvia bowleyana HOM05D000852 ORTHO05D000657 3.4e-09 65.5 113 42.5
SalBow6G2111 Salvia bowleyana HOM05D000852 ORTHO05D000657 5.7e-09 64.7 110 42.7
Migut.J01425 Erythranthe guttata HOM05D000852 ORTHO05D000657 7.5e-09 64.3 122 39.3
Gorai.010G157700 Gossypium raimondii HOM05D000852 ORTHO05D000657 1.7e-08 63.2 124 39.5
TWI34G0196 Tripterygium wilfordii HOM05D000852 ORTHO05D000657 1.7e-08 63.2 125 38.4
Potri.006G176300 Populus trichocarpa HOM05D000852 ORTHO05D000657 3.7e-08 62.0 123 39.8
Gohir.A06G133402 Gossypium hirsutum HOM05D000852 ORTHO05D000657 4.9e-08 61.6 126 38.9
Os09g0472700 Oryza sativa ssp. japonica HOM05D000852 ORTHO05D000657 4.9e-08 61.6 117 37.6
Peaxi162Scf00384g00031 Petunia axillaris HOM05D000852 ORTHO05D000657 4.9e-08 61.6 93 43.0
Gorai.008G081700 Gossypium raimondii HOM05D000852 ORTHO05D000657 8.3e-08 60.8 121 39.7
Dinv42779 Davidia involucrata HOM05D000852 ORTHO05D000657 1.1e-07 60.5 129 39.5
Dinv43322 Davidia involucrata HOM05D000852 ORTHO05D000657 1.1e-07 60.5 129 39.5
Gohir.D12G073801 Gossypium hirsutum HOM05D000852 ORTHO05D000657 1.1e-07 60.5 121 39.7
Ciclev10010346m.g Citrus clementina HOM05D000852 ORTHO05D000657 1.8e-07 59.7 130 37.7
Dinv42775 Davidia involucrata HOM05D000852 ORTHO05D000657 2.4e-07 59.3 124 37.1
Dinv43326 Davidia involucrata HOM05D000852 ORTHO05D000657 2.4e-07 59.3 124 37.1
Eucgr.B02703 Eucalyptus grandis HOM05D000852 ORTHO05D000657 2.4e-07 59.3 140 35.7
Thecc.09G162100 Theobroma cacao HOM05D000852 ORTHO05D000657 3.1e-07 58.9 122 40.2
Gohir.A12G080033 Gossypium hirsutum HOM05D000852 ORTHO05D000657 4.1e-07 58.5 123 39.0
HanXRQChr03g0067761 Helianthus annuus HOM05D000852 ORTHO05D000657 4.1e-07 58.5 110 36.4
Prupe.1G096800 Prunus persica HOM05D000852 ORTHO05D000657 7.0e-07 57.8 122 36.9
AUR62039967 Chenopodium quinoa HOM05D000852 ORTHO05D000657 9.2e-07 57.4 122 35.2
Prupe.1G096900 Prunus persica HOM05D000852 ORTHO05D000657 9.2e-07 57.4 130 35.4
CiPaw.08G039900 Carya illinoinensis HOM05D000852 ORTHO05D000657 1.2e-06 57.0 114 39.5
Gohir.D06G135750 Gossypium hirsutum HOM05D000852 ORTHO05D000657 1.2e-06 57.0 121 33.9
HanXRQChr03g0067771 Helianthus annuus HOM05D000852 ORTHO05D000657 1.2e-06 57.0 125 37.6
MD11G1210900 Malus domestica HOM05D000852 ORTHO05D000657 1.2e-06 57.0 127 34.6
FvH4_4g09540 Fragaria vesca HOM05D000852 ORTHO05D000657 1.6e-06 56.6 122 36.9
Os09g0472900 Oryza sativa ssp. japonica HOM05D000852 ORTHO05D000657 1.6e-06 56.6 106 36.8
AL7G21770 Arabidopsis lyrata HOM05D000852 ORTHO05D000657 2.0e-06 56.2 120 35.0
CiPaw.08G039800 Carya illinoinensis HOM05D000852 ORTHO05D000657 2.0e-06 56.2 114 39.5
Eucgr.B02700 Eucalyptus grandis HOM05D000852 ORTHO05D000657 2.7e-06 55.8 135 35.6
Thhalv10026568m.g Eutrema salsugineum HOM05D000852 ORTHO05D000657 2.7e-06 55.8 122 38.5
Lsat_1_v5_gn_7_52001 Lactuca sativa HOM05D000852 ORTHO05D000657 2.7e-06 55.8 111 40.5
Peaxi162Scf00841g00025 Petunia axillaris HOM05D000852 ORTHO05D000657 2.7e-06 55.8 93 40.9
Actinidia31681 Actinidia chinensis HOM05D000852 ORTHO05D000657 3.5e-06 55.5 132 36.4
BcaC09g51828 Brassica carinata HOM05D000852 ORTHO05D000657 4.5e-06 55.1 112 39.3
C01p08670 Brassica napus HOM05D000852 ORTHO05D000657 4.5e-06 55.1 112 39.3
BolC1t00849H Brassica oleracea HOM05D000852 ORTHO05D000657 4.5e-06 55.1 112 39.3
CSS0009715 Camellia sinensis var. sinensis HOM05D000852 ORTHO05D000657 4.5e-06 55.1 117 33.3
Cpa.g.sc75.13 Carica papaya HOM05D000852 ORTHO05D000657 4.5e-06 55.1 116 39.7
AUR62039747 Chenopodium quinoa HOM05D000852 ORTHO05D000657 4.5e-06 55.1 122 33.6
Gohir.D12G073800 Gossypium hirsutum HOM05D000852 ORTHO05D000657 4.5e-06 55.1 123 37.4
CANSAT11G0287 Cannabis sativa HOM05D000852 ORTHO05D000657 5.9e-06 54.7 110 36.4
AT4G30380 Arabidopsis thaliana HOM05D000852 ORTHO05D000657 7.7e-06 54.3 113 38.9
A01p07780 Brassica napus HOM05D000852 ORTHO05D000657 7.7e-06 54.3 114 39.5
BraA01t00722Z Brassica rapa HOM05D000852 ORTHO05D000657 7.7e-06 54.3 114 39.5
COL.COLO4_16050 Corchorus olitorius HOM05D000852 ORTHO05D000657 7.7e-06 54.3 127 40.9
SGA_v2.0_scaffold66G22512 Striga asiatica HOM05D000852 ORTHO05D000657 7.7e-06 54.3 114 35.1


User provided reference genes

Program Settings