Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G582.18 Capsicum annuum HOM05D006391 ORTHO05D007767 1.5e-220 769.2 406 100.0
Sopen11g002020 Solanum pennellii HOM05D006391 ORTHO05D007767 3.7e-166 588.6 372 86.3
Solyc11g006080.2 Solanum lycopersicum HOM05D006391 ORTHO05D007767 5.4e-165 584.7 358 89.1
PGSC0003DMG400028690 Solanum tuberosum HOM05D006391 ORTHO05D007767 7.8e-164 580.9 364 86.5
Nitab4.5_0000856g0160 Nicotiana tabacum HOM05D006391 ORTHO05D007767 6.0e-156 554.7 348 86.2
Peaxi162Scf00120g00213 Petunia axillaris HOM05D006391 ORTHO05D007767 1.8e-152 543.1 378 80.7
Nitab4.5_0004928g0020 Nicotiana tabacum HOM05D006391 ORTHO05D007767 1.2e-151 540.4 373 81.5
Cc02_g09040 Coffea canephora HOM05D006391 ORTHO05D007767 9.9e-127 457.6 367 69.8
Lj2A39G66 Lonicera japonica HOM05D006391 ORTHO05D007767 1.3e-126 457.2 360 70.0
COL.COLO4_15424 Corchorus olitorius HOM05D006391 ORTHO05D007767 8.4e-126 454.5 361 68.7
Sabra13G0041000 Salix brachista HOM05D006391 ORTHO05D007767 1.1e-125 454.1 365 68.8
CANSAT54G0018 Cannabis sativa HOM05D006391 ORTHO05D007767 1.9e-125 453.4 355 71.8
Cfa006327 Carpinus fangiana HOM05D006391 ORTHO05D007767 7.1e-125 451.4 357 69.7
Atru.chr2.892 Acer truncatum HOM05D006391 ORTHO05D007767 1.2e-124 450.7 358 70.1
Potri.013G044600 Populus trichocarpa HOM05D006391 ORTHO05D007767 2.1e-124 449.9 363 68.6
TAR636G3322 Trochodendron aralioides HOM05D001448 ORTHO05D005781 3.5e-124 449.1 355 69.0
SalBow3G3308 Salvia bowleyana HOM05D006391 ORTHO05D007767 1.0e-123 447.6 350 70.0
Thecc.05G276300 Theobroma cacao HOM05D006391 ORTHO05D007767 2.3e-123 446.4 359 68.8
Gorai.007G280500 Gossypium raimondii HOM05D006391 ORTHO05D007767 3.0e-123 446.0 356 68.8
Gohir.A11G251400 Gossypium hirsutum HOM05D006391 ORTHO05D007767 5.1e-123 445.3 356 68.5
GSVIVG01036208001 Vitis vinifera HOM05D006391 ORTHO05D007767 2.5e-122 443.0 359 66.9
Gohir.D11G261800 Gossypium hirsutum HOM05D006391 ORTHO05D007767 5.6e-122 441.8 356 68.5
Duzib177G0389 Durio zibethinus HOM05D006391 ORTHO05D007767 2.1e-121 439.9 353 68.3
CiPaw.07G078100 Carya illinoinensis HOM05D006391 ORTHO05D007767 3.7e-121 439.1 355 69.6
Actinidia06783 Actinidia chinensis HOM05D006391 ORTHO05D007767 4.8e-121 438.7 360 68.3
Dinv14621 Davidia involucrata HOM05D006391 ORTHO05D007767 6.2e-121 438.3 355 70.1
Nn1g02693 Nelumbo nucifera HOM05D006391 ORTHO05D007767 1.1e-120 437.6 358 68.4
AUR62004876 Chenopodium quinoa HOM05D006391 ORTHO05D007767 4.5e-119 432.2 354 66.1
PGR004G0019 Punica granatum HOM05D006391 ORTHO05D007767 4.5e-119 432.2 359 67.7
EL10Ac4g09055 Beta vulgaris HOM05D006391 ORTHO05D007767 7.6e-119 431.4 347 68.0
Manes.08G137500 Manihot esculenta HOM05D006391 ORTHO05D007767 1.0e-118 431.0 363 65.3
Sc09g0004120 Simmondsia chinensis HOM05D006391 ORTHO05D007767 1.7e-118 430.3 360 65.8
TWI56G1126 Tripterygium wilfordii HOM05D006391 ORTHO05D007767 1.7e-118 430.3 377 65.0
HanXRQChr08g0225371 Helianthus annuus HOM05D006391 ORTHO05D007767 2.2e-118 429.9 364 65.7
MD12G1245500 Malus domestica HOM05D006391 ORTHO05D007767 8.4e-118 427.9 354 66.7
ECA233G2464 Erigeron canadensis HOM05D006391 ORTHO05D007767 1.4e-117 427.2 385 63.9
Ciclev10020524m.g Citrus clementina HOM05D006391 ORTHO05D007767 4.2e-117 425.6 372 65.3
AUR62037609 Chenopodium quinoa HOM05D006391 ORTHO05D007767 9.3e-117 424.5 354 65.5
Migut.F00812 Erythranthe guttata HOM05D006391 ORTHO05D007767 1.6e-116 423.7 342 67.8
Lj5g0002062 Lotus japonicus HOM05D006391 ORTHO05D007767 1.3e-115 420.6 354 66.4
Eucgr.H04256 Eucalyptus grandis HOM05D006391 ORTHO05D007767 1.8e-115 420.2 357 67.8
QL03p031977 Quercus lobata HOM05D006391 ORTHO05D007767 3.9e-115 419.1 356 65.2
Prupe.6G348300 Prunus persica HOM05D006391 ORTHO05D007767 5.1e-115 418.7 359 64.3
Lalb_Chr21g0311261 Lupinus albus HOM05D006391 ORTHO05D007767 8.7e-115 417.9 351 64.7
Glyma.20G222100 Glycine max HOM05D006391 ORTHO05D007767 1.1e-114 417.5 353 66.3
Ca_10006_v3 Cicer arietinum L. HOM05D006391 ORTHO05D007767 1.9e-114 416.8 351 66.1
Medtr1g079830 Medicago truncatula HOM05D006391 ORTHO05D007767 1.9e-114 416.8 379 61.7
DCAR_028379 Daucus carota HOM05D006391 ORTHO05D007767 2.5e-114 416.4 332 68.7
VMungo0720G1212 Vigna mungo HOM05D006391 ORTHO05D007767 2.5e-114 416.4 340 67.1
Glyma.10G167000 Glycine max HOM05D006391 ORTHO05D007767 3.3e-114 416.0 353 66.0
CsaV3_1G045530 Cucumis sativus L. HOM05D006391 ORTHO05D007767 7.4e-114 414.8 381 63.0
AT3G04560 Arabidopsis thaliana HOM05D006391 ORTHO05D007767 9.7e-114 414.5 406 61.1
AL3G14580 Arabidopsis lyrata HOM05D006391 ORTHO05D007767 2.8e-113 412.9 402 60.7
arahy.Tifrunner.gnm1.ann1.DTTE32 Arachis hypogaea HOM05D006391 ORTHO05D007767 2.8e-113 412.9 352 65.9
FAN09G3726 Fragaria x ananassa HOM05D006391 ORTHO05D007767 4.8e-113 412.1 369 62.6
Lsat_1_v5_gn_8_2721 Lactuca sativa HOM05D006391 ORTHO05D007767 4.8e-113 412.1 375 63.5
MBI17_g17506_MAGBIO Magnolia biondii HOM05D006391 ORTHO05D007767 1.1e-112 411.0 371 63.3
vmacro20003 Vaccinium macrocarpon HOM05D006391 ORTHO05D007767 1.4e-112 410.6 376 63.3
FAN05G1344 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.4e-112 409.8 367 61.9
TPR.G10279 Trifolium pratense HOM05D006391 ORTHO05D007767 3.1e-112 409.5 376 62.0
AUR62001083 Chenopodium quinoa HOM05D006391 ORTHO05D007767 4.1e-112 409.1 378 61.1
FAN05G3173 Fragaria x ananassa HOM05D006391 ORTHO05D007767 4.1e-112 409.1 367 61.9
Phvul.L001863 Phaseolus vulgaris HOM05D006391 ORTHO05D007767 5.3e-112 408.7 341 65.7
PSO832G3851 Papaver somniferum HOM05D006391 ORTHO05D007767 9.0e-112 407.9 374 62.6
arahy.Tifrunner.gnm1.ann1.9EWV20 Arachis hypogaea HOM05D006391 ORTHO05D007767 1.5e-111 407.1 352 64.8
Carub.0003s0371 Capsella rubella HOM05D006391 ORTHO05D007767 2.0e-111 406.8 392 61.5
PSO210G7203 Papaver somniferum HOM05D006391 ORTHO05D007767 3.4e-111 406.0 378 61.6
FAN02G0817 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.2e-110 403.3 328 65.9
unitig_32.g11831 Utricularia gibba HOM05D006391 ORTHO05D007767 3.8e-110 402.5 335 65.1
CSS0020771 Camellia sinensis var. sinensis HOM05D006391 ORTHO05D007767 5.0e-110 402.1 352 65.3
BolC5t34924H Brassica oleracea HOM05D006391 ORTHO05D007767 1.1e-109 401.0 386 59.1
ATR0680G180 Amborella trichopoda HOM05D006391 ORTHO05D007767 1.9e-109 400.2 355 64.5
THA.LOC104827288 Tarenaya hassleriana HOM05D006391 ORTHO05D007767 1.9e-109 400.2 382 61.0
Thhalv10020805m.g Eutrema salsugineum HOM05D006391 ORTHO05D007767 3.2e-109 399.4 385 60.8
Rhsim05G0175400 Rhododendron simsii HOM05D006391 ORTHO05D007767 3.2e-109 399.4 419 57.0
Haze_04461 Corylus avellana HOM05D006391 ORTHO05D007767 4.2e-109 399.1 469 53.1
Hund22148 Selenicereus undatus HOM05D006391 ORTHO05D007767 4.2e-109 399.1 345 65.5
BcaC05g30188 Brassica carinata HOM05D006391 ORTHO05D007767 7.2e-109 398.3 387 58.1
ClCG06G009350 Citrullus lanatus HOM05D006391 ORTHO05D007767 7.2e-109 398.3 333 65.8
Aqoxy5G00275 Aquilegia oxysepala HOM05D006391 ORTHO05D007767 1.6e-108 397.1 358 61.7
RcHm_v2.0_Chr3g0450061 Rosa chinensis HOM05D006391 ORTHO05D007767 2.1e-108 396.7 374 60.4
BraA05t23038Z Brassica rapa HOM05D006391 ORTHO05D007767 3.9e-107 392.5 342 62.9
Aa31LG5G14980 Aethionema arabicum HOM05D006391 ORTHO05D007767 1.5e-106 390.6 353 62.0
Sp3g03400 Schrenkiella parvula HOM05D006391 ORTHO05D007767 2.0e-106 390.2 338 64.8
FAN14G3605 Fragaria x ananassa HOM05D006391 ORTHO05D007767 2.2e-105 386.7 376 59.3
MELO3C024661.2 Cucumis melo HOM05D006391 ORTHO05D007767 6.3e-105 385.2 398 58.8
CARHR078730 Cardamine hirsuta HOM05D006391 ORTHO05D007767 8.2e-105 384.8 399 57.6
FAN14G5548 Fragaria x ananassa HOM05D006391 ORTHO05D007767 1.4e-104 384.0 373 59.5
FvH4_6g02310 Fragaria vesca HOM05D006391 ORTHO05D007767 2.4e-104 383.3 373 59.5
Sed0026137 Sechium edule HOM05D006391 ORTHO05D007767 1.4e-101 374.0 363 60.6
Ah.04g163310 Amaranthus hybridus HOM05D006391 ORTHO05D007767 9.4e-101 371.3 366 60.1
C05p62710 Brassica napus HOM05D006391 ORTHO05D007767 1.6e-100 370.5 312 63.8
BcaC05g29933 Brassica carinata HOM05D006391 ORTHO05D007767 2.1e-100 370.2 312 63.8
A05p42930 Brassica napus HOM05D006391 ORTHO05D007767 1.1e-98 364.4 315 62.2
Sed0020342 Sechium edule HOM05D006391 ORTHO05D007767 1.1e-98 364.4 347 60.2
Sed0023982 Sechium edule HOM05D006391 ORTHO05D007767 3.3e-98 362.8 357 61.1
Os02g0820600 Oryza sativa ssp. japonica HOM05D006391 ORTHO05D007767 3.7e-97 359.4 377 55.7
Zm00001eb259140 Zea mays HOM05D006391 ORTHO05D007767 4.7e-92 342.4 328 59.5
SGA_v2.0_scaffold243G44310 Striga asiatica HOM05D006391 ORTHO05D007767 1.4e-91 340.9 350 55.4
SEGI_17356 Sequoiadendron giganteum HOM05D006391 ORTHO05D007767 2.6e-87 326.6 336 52.1
CDE04G1237 Ceratophyllum demersum HOM05D006391 ORTHO05D007767 4.8e-81 305.8 303 59.1
Cpa.g.sc162.14 Carica papaya HOM05D006391 ORTHO05D007767 2.2e-78 297.0 295 60.0
Pp3c19_8680 Physcomitrium patens HOM05D006391 ORTHO05D007767 1.9e-77 293.9 325 51.7
MD04G1228400 Malus domestica HOM05D006391 ORTHO05D007767 6.1e-76 288.9 267 60.3
HPP92_007146 Vanilla planifolia HOM05D006391 ORTHO05D007767 5.7e-74 282.3 254 56.7
SMO203G0061 Selaginella moellendorffii HOM05D006391 ORTHO05D007767 3.1e-72 276.6 321 49.8
Psat6g143040 Pisum sativum HOM05D006391 ORTHO05D007767 5.4e-72 275.8 260 61.9
Mapoly0044s0074 Marchantia polymorpha HOM05D006391 ORTHO05D007767 5.0e-70 269.2 344 46.2
Oeu034581.1 Olea europaea HOM05D006391 ORTHO05D007767 5.6e-61 239.2 203 66.0
HPP92_007142 Vanilla planifolia HOM05D006391 ORTHO05D007767 1.7e-57 227.6 281 47.7
CBR_g8309 Chara braunii HOM05D006391 ORTHO05D007767 1.9e-53 214.2 378 37.6
QL03p032009 Quercus lobata HOM05D006391 ORTHO05D007767 1.8e-43 181.0 128 72.7
Oeu058337.1 Olea europaea HOM05D006391 ORTHO05D007767 4.0e-43 179.9 136 68.4
SHI23187 Sapria himalayana HOM05D006391 ORTHO05D007767 1.7e-41 174.5 167 58.1
HPP92_007141 Vanilla planifolia HOM05D006391 ORTHO05D007767 2.7e-31 140.6 88 72.7
MCO07G609 Micromonas commoda HOM05D006391 ORTHO05D007767 4.6e-23 113.2 319 28.5
BcaB04g19320 Brassica carinata HOM05D006391 ORTHO05D007767 3.4e-18 97.1 87 63.2
MD04G1228300 Malus domestica HOM05D006391 ORTHO05D007767 7.9e-15 85.9 69 73.9
CAN.G67.3 Capsicum annuum HOM05D000010 ORTHO05D000063 7.4e-13 79.3 48 72.9
PRCOL_00004538 Prasinoderma coloniale HOM05D006391 ORTHO05D007767 3.1e-11 73.9 313 24.6
BcaC02g11594 Brassica carinata HOM05D006391 ORTHO05D007767 1.0e-09 68.9 47 59.6
Cre02.g105450 Chlamydomonas reinhardtii HOM05D006391 ORTHO05D007767 1.0e-09 68.9 272 27.2
BolC5t34511H Brassica oleracea HOM05D004842 ORTHO05D005929 1.7e-09 68.2 46 63.0
BolC3t17856H Brassica oleracea HOM05D004842 ORTHO05D005929 2.9e-09 67.4 46 60.9
Sopen05g024450 Solanum pennellii HOM05D000014 ORTHO05D000093 2.3e-06 57.8 51 51.0
Sopen11g017190 Solanum pennellii HOM05D000014 ORTHO05D000093 8.7e-06 55.8 37 59.5


User provided reference genes

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