Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G582.15 Capsicum annuum HOM05D006219 ORTHO05D007562 2.7e-258 894.8 450 100.0
PGSC0003DMG400028668 Solanum tuberosum HOM05D006219 ORTHO05D007562 1.0e-212 743.4 454 81.7
Sopen11g002000 Solanum pennellii HOM05D006219 ORTHO05D007562 4.2e-211 738.0 454 81.5
Solyc11g006060.2 Solanum lycopersicum HOM05D006219 ORTHO05D007562 7.0e-206 720.7 443 81.5
Peaxi162Scf00120g00021 Petunia axillaris HOM05D006219 ORTHO05D007562 1.2e-192 676.8 460 74.8
Nitab4.5_0000856g0150 Nicotiana tabacum HOM05D006219 ORTHO05D007562 2.0e-184 649.4 454 73.6
Nitab4.5_0010345g0010 Nicotiana tabacum HOM05D006219 ORTHO05D007562 6.4e-183 644.4 451 73.4
Cpa.g.sc162.24 Carica papaya HOM05D006219 ORTHO05D007562 2.0e-136 490.0 457 57.3
Oeu029038.1 Olea europaea HOM05D006219 ORTHO05D007562 1.3e-135 487.3 441 59.2
SalBow3G3408 Salvia bowleyana HOM05D006219 ORTHO05D007562 6.4e-135 485.0 463 57.7
FAN05G4153 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.1e-134 484.2 456 57.2
Dinv06988 Davidia involucrata HOM05D006219 ORTHO05D007562 1.9e-134 483.4 438 58.2
FvH4_6g02280 Fragaria vesca HOM05D006219 ORTHO05D007562 3.2e-134 482.6 455 57.1
FAN02G1274 Fragaria x ananassa HOM05D006219 ORTHO05D007562 4.2e-134 482.3 456 57.5
Manes.09G149100 Manihot esculenta HOM05D006219 ORTHO05D007562 1.6e-133 480.3 460 57.8
CSS0036761 Camellia sinensis var. sinensis HOM05D006219 ORTHO05D007562 3.5e-133 479.2 452 56.9
FAN05G2712 Fragaria x ananassa HOM05D006219 ORTHO05D007562 3.5e-133 479.2 456 56.8
Lj2C39T18 Lonicera japonica HOM05D006219 ORTHO05D007562 3.5e-133 479.2 443 56.4
Atru.chr2.897 Acer truncatum HOM05D006219 ORTHO05D007562 4.6e-133 478.8 451 57.9
Potri.013G044900 Populus trichocarpa HOM05D006219 ORTHO05D007562 1.0e-132 477.6 456 56.6
Prupe.6G348600 Prunus persica HOM05D006219 ORTHO05D007562 3.0e-132 476.1 468 53.6
Cfa006329 Carpinus fangiana HOM05D006219 ORTHO05D007562 6.2e-130 468.4 459 57.1
Duzib128G1627 Durio zibethinus HOM05D006219 ORTHO05D007562 6.2e-130 468.4 430 56.7
Gorai.013G120100 Gossypium raimondii HOM05D006219 ORTHO05D007562 5.3e-129 465.3 450 54.7
Gohir.D13G107000 Gossypium hirsutum HOM05D006219 ORTHO05D007562 1.5e-128 463.8 450 54.9
Gohir.A13G103800 Gossypium hirsutum HOM05D006219 ORTHO05D007562 2.0e-128 463.4 450 54.7
CiPaw.07G078300 Carya illinoinensis HOM05D006219 ORTHO05D007562 5.8e-128 461.8 460 56.1
Thecc.05G275300 Theobroma cacao HOM05D006219 ORTHO05D007562 5.8e-128 461.8 453 55.8
FAN09G4845 Fragaria x ananassa HOM05D006219 ORTHO05D007562 7.6e-128 461.5 387 60.5
Haze_04459 Corylus avellana HOM05D006219 ORTHO05D007562 1.7e-127 460.3 455 56.5
MD12G1245900 Malus domestica HOM05D006219 ORTHO05D007562 2.9e-127 459.5 460 54.1
Sabra13G0041300 Salix brachista HOM05D006219 ORTHO05D007562 6.5e-127 458.4 461 53.8
CsaV3_1G045560 Cucumis sativus L. HOM05D006219 ORTHO05D007562 2.5e-126 456.4 460 54.8
PGR004G0430 Punica granatum HOM05D006219 ORTHO05D007562 3.2e-126 456.1 446 54.5
QL03p031869 Quercus lobata HOM05D006219 ORTHO05D007562 5.5e-126 455.3 461 56.2
QL08p015782 Quercus lobata HOM05D006219 ORTHO05D007562 1.2e-125 454.1 461 56.0
Lsat_1_v5_gn_2_107721 Lactuca sativa HOM05D006219 ORTHO05D007562 3.5e-125 452.6 460 54.3
Lalb_Chr06g0168341 Lupinus albus HOM05D006219 ORTHO05D007562 3.5e-125 452.6 394 58.1
TWI36G0216 Tripterygium wilfordii HOM05D006219 ORTHO05D007562 1.0e-124 451.1 411 56.9
Phvul.L001763 Phaseolus vulgaris HOM05D006219 ORTHO05D007562 1.3e-124 450.7 444 54.3
CANSAT54G2996 Cannabis sativa HOM05D006219 ORTHO05D007562 3.0e-124 449.5 454 53.3
Sc06g0004060 Simmondsia chinensis HOM05D006219 ORTHO05D007562 3.3e-123 446.0 458 54.6
Ca_10007_v3 Cicer arietinum L. HOM05D006219 ORTHO05D007562 4.3e-123 445.7 440 54.1
MELO3C024664.2 Cucumis melo HOM05D006219 ORTHO05D007562 5.7e-123 445.3 461 54.0
ClCG06G009410 Citrullus lanatus HOM05D006219 ORTHO05D007562 1.3e-122 444.1 451 55.4
Migut.F00810 Erythranthe guttata HOM05D006219 ORTHO05D007562 4.8e-122 442.2 455 53.2
Lj5g0004576 Lotus japonicus HOM05D006219 ORTHO05D007562 4.8e-122 442.2 442 54.3
BraA06t26711Z Brassica rapa HOM05D006219 ORTHO05D007562 5.3e-121 438.7 455 53.8
THA.LOC104799246 Tarenaya hassleriana HOM05D006219 ORTHO05D007562 6.9e-121 438.3 456 53.5
TAR633G0272 Trochodendron aralioides HOM05D006219 ORTHO05D007562 6.9e-121 438.3 457 52.7
Thhalv10004236m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 9.0e-121 438.0 459 53.2
A06p37950 Brassica napus HOM05D006219 ORTHO05D007562 1.2e-120 437.6 455 54.1
Aa31LG11G8710 Aethionema arabicum HOM05D006219 ORTHO05D007562 1.5e-120 437.2 453 52.5
C07p40330 Brassica napus HOM05D006219 ORTHO05D007562 2.0e-120 436.8 455 53.8
Aqoxy5G00261 Aquilegia oxysepala HOM05D006219 ORTHO05D007562 2.6e-120 436.4 456 52.4
BcaNung02093 Brassica carinata HOM05D006219 ORTHO05D007562 4.5e-120 435.6 455 53.6
BolC7t44567H Brassica oleracea HOM05D006219 ORTHO05D007562 4.5e-120 435.6 455 53.6
Sp2g20170 Schrenkiella parvula HOM05D006219 ORTHO05D007562 5.9e-120 435.3 452 52.0
VMungo0720G3050 Vigna mungo HOM05D006219 ORTHO05D007562 7.7e-120 434.9 453 53.6
BcaNung01728 Brassica carinata HOM05D006219 ORTHO05D007562 1.4e-118 430.6 452 52.9
Glyma.10G166900 Glycine max HOM05D006219 ORTHO05D007562 1.4e-118 430.6 447 53.7
CARHR185150 Cardamine hirsuta HOM05D006219 ORTHO05D007562 3.2e-118 429.5 453 52.1
DCAR_030973 Daucus carota HOM05D006219 ORTHO05D007562 3.2e-118 429.5 440 52.3
AL6G40560 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 9.4e-118 427.9 453 51.7
Rhsim05G0175300 Rhododendron simsii HOM05D006219 ORTHO05D007562 1.6e-117 427.2 453 52.1
AUR62037607 Chenopodium quinoa HOM05D006219 ORTHO05D007562 2.7e-117 426.4 401 56.9
Actinidia06785 Actinidia chinensis HOM05D006219 ORTHO05D007562 4.6e-117 425.6 454 54.2
HanXRQChr07g0201901 Helianthus annuus HOM05D006219 ORTHO05D007562 6.1e-117 425.2 458 51.1
HanXRQChr14g0458931 Helianthus annuus HOM05D006219 ORTHO05D007562 1.8e-116 423.7 471 51.6
Sed0012882 Sechium edule HOM05D006219 ORTHO05D007562 1.7e-114 417.2 412 54.6
Medtr1g079870 Medicago truncatula HOM05D006219 ORTHO05D007562 2.2e-114 416.8 392 55.1
AT5G28500 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 6.3e-114 415.2 412 54.4
unitig_748.g8683 Utricularia gibba HOM05D006219 ORTHO05D007562 1.1e-113 414.5 388 55.9
DCAR_002178 Daucus carota HOM05D006219 ORTHO05D007562 1.4e-113 414.1 386 56.0
ECA238G2300 Erigeron canadensis HOM05D006219 ORTHO05D007562 1.8e-113 413.7 465 49.0
Carub.0006s2578 Capsella rubella HOM05D006219 ORTHO05D007562 3.1e-113 412.9 409 54.5
Thhalv10020727m.g Eutrema salsugineum HOM05D006219 ORTHO05D007562 6.9e-113 411.8 451 51.4
Aa31LG5G14970 Aethionema arabicum HOM05D006219 ORTHO05D007562 1.2e-112 411.0 396 55.1
Ah.06g191950 Amaranthus hybridus HOM05D006219 ORTHO05D007562 5.0e-111 405.6 452 51.5
FAN14G1966 Fragaria x ananassa HOM05D006219 ORTHO05D007562 5.0e-111 405.6 455 52.1
FAN14G5007 Fragaria x ananassa HOM05D006219 ORTHO05D007562 1.4e-110 404.1 455 51.9
PSO210G1007 Papaver somniferum HOM05D006219 ORTHO05D007562 2.5e-110 403.3 445 46.7
BcaC09g47795 Brassica carinata HOM05D006219 ORTHO05D007562 7.2e-110 401.7 450 50.7
PSO832G3978 Papaver somniferum HOM05D006219 ORTHO05D007562 7.2e-110 401.7 445 46.3
BolC1t05743H Brassica oleracea HOM05D006219 ORTHO05D007562 4.7e-109 399.1 455 50.1
BraA01t04521Z Brassica rapa HOM05D006219 ORTHO05D007562 1.0e-108 397.9 428 50.9
AT3G04550 Arabidopsis thaliana HOM05D006219 ORTHO05D007562 1.8e-108 397.1 445 49.7
A01p40850 Brassica napus HOM05D006219 ORTHO05D007562 8.8e-108 394.8 429 50.3
BNapus_Darmor_BZH_scaffold_78p00860 Brassica napus HOM05D006219 ORTHO05D007562 8.8e-108 394.8 429 50.3
Carub.0003s0370 Capsella rubella HOM05D006219 ORTHO05D007562 8.8e-108 394.8 444 49.8
AL3G14570 Arabidopsis lyrata HOM05D006219 ORTHO05D007562 3.3e-107 392.9 394 53.3
EL10Ac4g09057 Beta vulgaris HOM05D006219 ORTHO05D007562 4.4e-107 392.5 464 48.3
CARHR078740 Cardamine hirsuta HOM05D006219 ORTHO05D007562 4.4e-107 392.5 451 48.8
BcaB04g21366 Brassica carinata HOM05D006219 ORTHO05D007562 9.7e-107 391.3 447 49.9
Sp3g03390 Schrenkiella parvula HOM05D006219 ORTHO05D007562 4.8e-106 389.0 452 49.6
HPP92_025973 Vanilla planifolia HOM05D006219 ORTHO05D007562 7.4e-99 365.2 394 51.3
RcHm_v2.0_Chr3g0450031 Rosa chinensis HOM05D006219 ORTHO05D007562 9.7e-99 364.8 329 57.1
CDE05G0955 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 4.1e-97 359.4 390 51.5
SGA_v2.0_scaffold210G42065 Striga asiatica HOM05D006219 ORTHO05D007562 1.0e-95 354.8 366 54.6
Psat6g143080 Pisum sativum HOM05D006219 ORTHO05D007562 2.2e-95 353.6 343 52.8
AUR62004874 Chenopodium quinoa HOM05D006219 ORTHO05D007562 5.5e-94 349.0 345 53.3
vmacro20002 Vaccinium macrocarpon HOM05D006219 ORTHO05D007562 2.6e-91 340.1 343 52.8
TPR.G10266 Trifolium pratense HOM05D006219 ORTHO05D007562 5.7e-91 339.0 428 46.3
CDE08G1514 Ceratophyllum demersum HOM05D006219 ORTHO05D007562 9.1e-89 331.6 369 48.5
ATR0680G103 Amborella trichopoda HOM05D006219 ORTHO05D007562 4.4e-83 312.8 443 43.8
Nn1g02711 Nelumbo nucifera HOM05D006219 ORTHO05D007562 1.7e-82 310.8 331 52.9
Os10g0445600 Oryza sativa ssp. japonica HOM05D006219 ORTHO05D007562 9.1e-81 305.1 479 41.8
Zm00001eb066000 Zea mays HOM05D006219 ORTHO05D007562 2.2e-74 283.9 453 41.1
Hma1.2p1_1227F.1_g268570 Hydrangea macrophylla HOM05D006219 ORTHO05D007562 3.7e-74 283.1 336 49.4
MBI18_g37358_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 1.1e-73 281.6 365 46.0
MBI18_g32212_MAGBIO Magnolia biondii HOM05D006219 ORTHO05D007562 3.6e-69 266.5 476 41.8
SEGI_10874 Sequoiadendron giganteum HOM05D006219 ORTHO05D007562 2.2e-66 257.3 392 38.3
Glyma.20G222200 Glycine max HOM05D006219 ORTHO05D007562 1.5e-62 244.6 255 51.0
MD04G1228600 Malus domestica HOM05D006219 ORTHO05D007562 5.2e-60 236.1 227 52.0
Ciclev10027647m.g Citrus clementina HOM05D006219 ORTHO05D007562 8.3e-58 228.8 218 55.5
Mapoly0001s0431 Marchantia polymorpha HOM05D006219 ORTHO05D007562 1.2e-53 214.9 389 36.5
AagrBONN_evm.TU.Sc2ySwM_117.503 Anthoceros agrestis HOM05D006219 ORTHO05D007562 3.7e-50 203.4 401 34.9
Eucgr.H04253 Eucalyptus grandis HOM05D006219 ORTHO05D007562 3.7e-50 203.4 298 44.6
Lalb_Chr18g0044051 Lupinus albus HOM05D006219 ORTHO05D007562 1.9e-49 201.1 267 43.8
Pp3c18_4320 Physcomitrium patens HOM05D006219 ORTHO05D007562 4.6e-48 196.4 386 35.2
CBR_g29314 Chara braunii HOM05D006219 ORTHO05D007562 1.9e-46 191.0 425 34.1
Cre06.g308450 Chlamydomonas reinhardtii HOM05D006219 ORTHO05D007562 2.0e-27 127.9 419 29.8
AagrBONN_evm.TU.Sc2ySwM_228.3126 Anthoceros agrestis HOM05D006219 ORTHO05D007562 1.1e-20 105.5 199 37.7
Cpa.g.sc162.21 Carica papaya HOM05D000369 ORTHO05D007562 7.6e-19 99.4 107 50.5
SMO137G0122 Selaginella moellendorffii HOM05D006219 ORTHO05D007562 1.8e-15 88.2 168 35.7
MCO04G553 Micromonas commoda HOM05D006219 ORTHO05D007562 2.3e-15 87.8 401 25.4
Mapoly4350s0001 Marchantia polymorpha HOM05D006219 ORTHO05D007562 8.7e-15 85.9 158 33.5
Pp3c16_6440 Physcomitrium patens HOM05D006219 ORTHO05D007562 3.8e-10 70.5 186 29.0
Glyma.15G246700 Glycine max HOM05D001461 ORTHO05D005534 3.0e-07 60.8 93 36.6


User provided reference genes

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