Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G58.36 Capsicum annuum HOM05D006743 ORTHO05D008518 9.0e-182 640.2 336 100.0
Solyc05g007440.3 Solanum lycopersicum HOM05D006743 ORTHO05D008518 9.9e-173 610.1 335 94.6
PGSC0003DMG400003385 Solanum tuberosum HOM05D006743 ORTHO05D008518 4.9e-172 607.8 336 94.0
Nitab4.5_0012364g0010 Nicotiana tabacum HOM05D006743 ORTHO05D008518 4.5e-157 558.1 338 88.5
Peaxi162Scf00541g00528 Petunia axillaris HOM05D006743 ORTHO05D008518 1.6e-154 549.7 338 85.5
MSTRG.13418 Avicennia marina HOM05D006743 ORTHO05D008518 2.0e-144 516.2 332 79.2
Cc11_g13110 Coffea canephora HOM05D006743 ORTHO05D008518 2.9e-140 502.3 325 80.3
Dinv16636 Davidia involucrata HOM05D006743 ORTHO05D008518 3.6e-138 495.4 337 77.2
SalBow8G2540 Salvia bowleyana HOM05D006743 ORTHO05D008518 8.8e-137 490.7 336 75.3
Nitab4.5_0000703g0080 Nicotiana tabacum HOM05D006743 ORTHO05D008518 1.1e-136 490.3 302 87.4
Rhsim12G0063200 Rhododendron simsii HOM05D006743 ORTHO05D008518 3.3e-136 488.8 337 75.1
CSS0008818 Camellia sinensis var. sinensis HOM05D006743 ORTHO05D008518 4.4e-136 488.4 330 75.8
Cpa.g.sc128.13 Carica papaya HOM05D006743 ORTHO05D008518 3.7e-135 485.3 329 76.9
Lj3C1038T21 Lonicera japonica HOM05D006743 ORTHO05D008518 8.2e-135 484.2 331 76.4
Hma1.2p1_0598F.1_g186630 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 3.1e-134 482.3 337 75.4
Gohir.A12G165400 Gossypium hirsutum HOM05D006743 ORTHO05D008518 1.5e-133 479.9 337 75.7
vmacro01252 Vaccinium macrocarpon HOM05D006743 ORTHO05D008518 2.0e-133 479.6 374 68.4
CiPaw.06G083800 Carya illinoinensis HOM05D006743 ORTHO05D008518 5.9e-133 478.0 337 76.0
Manes.01G186600 Manihot esculenta HOM05D006743 ORTHO05D008518 5.9e-133 478.0 334 74.6
TWI12G0418 Tripterygium wilfordii HOM05D006743 ORTHO05D008518 1.0e-132 477.2 331 72.8
unitig_22.g5546 Utricularia gibba HOM05D006743 ORTHO05D008518 1.0e-132 477.2 332 74.1
Potri.013G124050 Populus trichocarpa HOM05D006743 ORTHO05D008518 1.7e-132 476.5 337 74.5
THA.LOC104805154 Tarenaya hassleriana HOM05D006743 ORTHO05D008518 1.7e-132 476.5 333 74.5
Atru.chr11.1802 Acer truncatum HOM05D006743 ORTHO05D008518 2.2e-132 476.1 337 74.8
Gohir.D12G168500 Gossypium hirsutum HOM05D006743 ORTHO05D008518 2.9e-132 475.7 337 74.8
Lsat_1_v5_gn_8_52820 Lactuca sativa HOM05D006743 ORTHO05D008518 3.8e-132 475.3 337 72.1
HanXRQChr12g0362551 Helianthus annuus HOM05D006743 ORTHO05D008518 6.5e-132 474.6 337 73.3
TAR622G0326 Trochodendron aralioides HOM05D006743 ORTHO05D008518 1.2e-130 470.3 337 73.6
Sp1g12650 Schrenkiella parvula HOM05D006743 ORTHO05D008518 1.8e-129 466.5 333 72.4
Sopen05g003320 Solanum pennellii HOM05D006743 ORTHO05D008518 3.0e-129 465.7 254 94.9
SGA_v2.0_scaffold389G50576 Striga asiatica HOM05D006743 ORTHO05D008518 3.0e-129 465.7 357 70.0
GSVIVG01020003001 Vitis vinifera HOM05D006743 ORTHO05D008518 5.2e-129 464.9 337 71.8
MD16G1074200 Malus domestica HOM05D006743 ORTHO05D008518 6.7e-129 464.5 337 72.4
Hund05886 Selenicereus undatus HOM05D006743 ORTHO05D008518 6.7e-129 464.5 334 71.6
AL1G26180 Arabidopsis lyrata HOM05D006743 ORTHO05D008518 8.8e-129 464.2 333 72.1
Carub.0001s1398 Capsella rubella HOM05D006743 ORTHO05D008518 1.5e-128 463.4 333 71.5
arahy.Tifrunner.gnm1.ann1.MT78EL Arachis hypogaea HOM05D006743 ORTHO05D008518 2.0e-128 463.0 337 72.4
AT1G14300 Arabidopsis thaliana HOM05D006743 ORTHO05D008518 5.7e-128 461.5 333 71.5
arahy.Tifrunner.gnm1.ann1.0ELP1Z Arachis hypogaea HOM05D006743 ORTHO05D008518 5.7e-128 461.5 337 72.1
Lalb_Chr16g0385831 Lupinus albus HOM05D006743 ORTHO05D008518 5.7e-128 461.5 337 70.6
PGR119G0901 Punica granatum HOM05D006743 ORTHO05D008518 7.4e-128 461.1 337 69.7
DCAR_007148 Daucus carota HOM05D006743 ORTHO05D008518 2.2e-127 459.5 335 70.4
Psat4g134120 Pisum sativum HOM05D006743 ORTHO05D008518 2.2e-127 459.5 337 70.0
ECA233G3761 Erigeron canadensis HOM05D006743 ORTHO05D008518 2.8e-127 459.1 329 71.7
FAN22G1517 Fragaria x ananassa HOM05D006743 ORTHO05D008518 4.8e-127 458.4 338 71.0
Potri.019G092000 Populus trichocarpa HOM05D006743 ORTHO05D008518 8.2e-127 457.6 325 73.2
FvH4_4g31470 Fragaria vesca HOM05D006743 ORTHO05D008518 1.1e-126 457.2 338 71.0
CARHR014720 Cardamine hirsuta HOM05D006743 ORTHO05D008518 1.8e-126 456.4 333 71.2
RcHm_v2.0_Chr4g0439961 Rosa chinensis HOM05D006743 ORTHO05D008518 3.1e-126 455.7 338 71.0
CANSAT80G2808 Cannabis sativa HOM05D006743 ORTHO05D008518 5.3e-126 454.9 332 71.1
BcaC05g25323 Brassica carinata HOM05D006743 ORTHO05D008518 9.1e-126 454.1 332 71.1
MELO3C024128.2 Cucumis melo HOM05D006743 ORTHO05D008518 9.1e-126 454.1 330 71.5
CsaV3_7G025360 Cucumis sativus L. HOM05D006743 ORTHO05D008518 1.2e-125 453.8 330 71.5
A06p10280 Brassica napus HOM05D006743 ORTHO05D008518 5.9e-125 451.4 336 69.9
Ca_24218_v3 Cicer arietinum L. HOM05D006743 ORTHO05D008518 7.7e-125 451.1 336 69.0
C05p12050 Brassica napus HOM05D006743 ORTHO05D008518 1.0e-124 450.7 332 70.2
AUR62028791 Chenopodium quinoa HOM05D006743 ORTHO05D008518 1.0e-124 450.7 328 71.6
Glyma.18G120051 Glycine max HOM05D006743 ORTHO05D008518 1.7e-124 449.9 337 69.1
BraA06t24210Z Brassica rapa HOM05D006743 ORTHO05D008518 2.2e-124 449.5 331 70.4
VMungo0251G3125 Vigna mungo HOM05D006743 ORTHO05D008518 2.2e-124 449.5 334 69.5
Aa31LG1G750 Aethionema arabicum HOM05D006743 ORTHO05D008518 2.9e-124 449.1 336 69.0
EL10Ac6g13192 Beta vulgaris HOM05D006743 ORTHO05D008518 2.9e-124 449.1 328 70.7
Sabra13G0103000 Salix brachista HOM05D006743 ORTHO05D008518 3.8e-124 448.7 353 68.6
MBI02_g23683_MAGBIO Magnolia biondii HOM05D006743 ORTHO05D008518 5.0e-124 448.4 337 70.0
COL.COLO4_22995 Corchorus olitorius HOM05D006743 ORTHO05D008518 6.5e-124 448.0 337 71.5
Aqoxy3G00673 Aquilegia oxysepala HOM05D006743 ORTHO05D008518 1.5e-123 446.8 337 68.5
Glyma.08G300451 Glycine max HOM05D006743 ORTHO05D008518 1.5e-123 446.8 337 68.5
Medtr8g055880 Medicago truncatula HOM05D006743 ORTHO05D008518 9.4e-123 444.1 334 68.6
BolC5t29959H Brassica oleracea HOM05D006743 ORTHO05D008518 1.0e-121 440.7 325 70.2
Haze_12021 Corylus avellana HOM05D006743 ORTHO05D008518 1.0e-121 440.7 316 73.4
Lj4g0006351 Lotus japonicus HOM05D006743 ORTHO05D008518 1.4e-121 440.3 321 70.1
Phvul.003G049600 Phaseolus vulgaris HOM05D006743 ORTHO05D008518 1.8e-121 439.9 321 69.8
PSO478G0657 Papaver somniferum HOM05D006743 ORTHO05D008518 4.0e-121 438.7 332 67.5
Thecc.02G350900 Theobroma cacao HOM05D006743 ORTHO05D008518 4.4e-120 435.3 337 70.9
CDE02G3655 Ceratophyllum demersum HOM05D006743 ORTHO05D008518 3.1e-118 429.1 332 67.8
AUR62005766 Chenopodium quinoa HOM05D006743 ORTHO05D008518 5.3e-118 428.3 346 66.5
FAN12G0030 Fragaria x ananassa HOM05D006743 ORTHO05D008518 2.2e-116 422.9 398 60.6
ATR0564G062 Amborella trichopoda HOM05D006743 ORTHO05D008518 8.5e-116 421.0 323 69.7
TPR.G31812 Trifolium pratense HOM05D006743 ORTHO05D008518 1.8e-113 413.3 327 66.7
ClCG09G009490 Citrullus lanatus HOM05D006743 ORTHO05D008518 1.2e-112 410.6 321 68.5
Actinidia31893 Actinidia chinensis HOM05D006743 ORTHO05D008518 2.6e-112 409.5 337 65.6
Nn3g17215 Nelumbo nucifera HOM05D006743 ORTHO05D008518 1.1e-107 394.0 334 65.9
BcaNung06708 Brassica carinata HOM05D006743 ORTHO05D008518 1.6e-106 390.2 335 63.0
Sc14g0008270 Simmondsia chinensis HOM05D006743 ORTHO05D008518 1.4e-105 387.1 282 73.0
Duzib268G1478 Durio zibethinus HOM05D006743 ORTHO05D008518 4.4e-104 382.1 337 63.8
Sed0013774 Sechium edule HOM05D006743 ORTHO05D008518 1.0e-97 360.9 333 59.8
Os10g0406800 Oryza sativa ssp. japonica HOM05D006743 ORTHO05D008518 2.3e-97 359.8 340 59.1
Zm00001eb223220 Zea mays HOM05D006743 ORTHO05D008518 4.0e-97 359.0 329 60.8
Mapoly0146s0011 Marchantia polymorpha HOM05D006743 ORTHO05D008518 5.2e-97 358.6 333 55.9
Pp3c6_14800 Physcomitrium patens HOM05D006743 ORTHO05D008518 1.4e-89 334.0 333 52.6
SMO307G0042 Selaginella moellendorffii HOM05D006743 ORTHO05D008518 4.3e-83 312.4 321 50.8
HPP92_011352 Vanilla planifolia HOM05D006743 ORTHO05D008518 4.7e-82 308.9 242 66.1
Hma1.2p1_0598F.1_g186620 Hydrangea macrophylla HOM05D006743 ORTHO05D008518 1.8e-81 307.0 207 77.3
Migut.E00100 Erythranthe guttata HOM05D006743 ORTHO05D008518 2.3e-81 306.6 197 78.2
AagrBONN_evm.TU.Sc2ySwM_344.2267 Anthoceros agrestis HOM05D006743 ORTHO05D008518 6.8e-81 305.1 325 51.1
Oeu045403.1 Olea europaea HOM05D006743 ORTHO05D008518 5.1e-76 288.9 185 80.0
AagrBONN_evm.TU.Sc2ySwM_27.11 Anthoceros agrestis HOM05D006743 ORTHO05D008518 2.5e-75 286.6 325 47.4
QL03p064380 Quercus lobata HOM05D006743 ORTHO05D008518 2.5e-67 260.0 201 72.1
Lsat_1_v5_gn_7_2081 Lactuca sativa HOM05D006743 ORTHO05D008518 2.1e-66 256.9 239 60.3
Sabra19G0105400 Salix brachista HOM05D006743 ORTHO05D008518 4.8e-66 255.8 373 46.1
DCAR_010724 Daucus carota HOM05D006743 ORTHO05D008518 4.4e-64 249.2 318 46.5
AagrBONN_evm.TU.Sc2ySwM_27.9 Anthoceros agrestis HOM05D006743 ORTHO05D008518 1.3e-63 247.7 325 42.8
CBR_g41270 Chara braunii HOM05D006743 ORTHO05D008518 5.4e-62 242.3 352 39.8
Peaxi162Scf00541g00531 Petunia axillaris HOM05D006743 ORTHO05D008518 1.7e-60 237.3 173 71.7
Oeu045402.1 Olea europaea HOM05D006743 ORTHO05D008518 2.8e-58 229.9 151 77.5
Nn1g08820 Nelumbo nucifera HOM05D006743 ORTHO05D008518 7.9e-45 185.3 323 41.5
AagrBONN_evm.TU.Sc2ySwM_117.3556 Anthoceros agrestis HOM05D006743 ORTHO05D008518 1.3e-44 184.5 170 51.8
Nn4g22981 Nelumbo nucifera HOM05D006743 ORTHO05D008518 1.8e-44 184.1 318 41.5
Migut.E00098 Erythranthe guttata HOM05D006743 ORTHO05D008518 9.0e-41 171.8 125 72.8
Cre10.g437100 Chlamydomonas reinhardtii HOM05D006743 ORTHO05D008518 1.2e-37 161.4 330 33.9
Actinidia28328 Actinidia chinensis HOM05D006743 ORTHO05D008518 6.3e-34 149.1 124 62.1
QL03p064376 Quercus lobata HOM05D006743 ORTHO05D008518 2.2e-31 140.6 89 77.5
SEGI_09156 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 3.2e-22 110.2 76 68.4
PRCOL_00003635 Prasinoderma coloniale HOM05D006743 ORTHO05D008518 6.3e-18 95.9 336 26.8
SEGI_31629 Sequoiadendron giganteum HOM05D006743 ORTHO05D008518 2.3e-12 77.4 59 62.7
RcHm_v2.0_Chr5g0047461 Rosa chinensis HOM05D006743 ORTHO05D008518 7.2e-06 55.8 35 77.1


User provided reference genes

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